-
1
-
-
33847249975
-
Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors
-
Alexander, R.P., and Zhulin, I.B. (2007) Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors. Proc Natl Acad Sci USA 104: 2885-2890.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2885-2890
-
-
Alexander, R.P.1
Zhulin, I.B.2
-
2
-
-
0028097182
-
Constitutively signaling fragments of Tsr, the Escherichia coli serine chemoreceptor
-
Ames, P., and Parkinson, J.S. (1994) Constitutively signaling fragments of Tsr, the Escherichia coli serine chemoreceptor. J Bacteriol 176: 6340-6348.
-
(1994)
J Bacteriol
, vol.176
, pp. 6340-6348
-
-
Ames, P.1
Parkinson, J.S.2
-
3
-
-
0037076332
-
Collaborative signaling by mixed chemoreceptor teams in Escherichia coli
-
Ames, P., Studdert, C.A., Reiser, R.H., and Parkinson, J.S. (2002) Collaborative signaling by mixed chemoreceptor teams in Escherichia coli. Proc Natl Acad Sci USA 99: 7060-7065.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 7060-7065
-
-
Ames, P.1
Studdert, C.A.2
Reiser, R.H.3
Parkinson, J.S.4
-
4
-
-
2942545825
-
Methylation-independent aerotaxis mediated by the Escherichia coli Aer protein
-
Bibikov, S.I., Miller, A.C., Gosink, K.K., and Parkinson, J.S. (2004) Methylation-independent aerotaxis mediated by the Escherichia coli Aer protein. J Bacteriol 186: 3730-3737.
-
(2004)
J Bacteriol
, vol.186
, pp. 3730-3737
-
-
Bibikov, S.I.1
Miller, A.C.2
Gosink, K.K.3
Parkinson, J.S.4
-
5
-
-
0017584161
-
Construction and characterization of new cloning vehicles. II. A multipurpose cloning system
-
Bolivar, F., Rodriguez, R.L., Greene, P.J., Betlach, M.C., Heyneker, H.L., and Boyer, H.W. (1977) Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene 2: 95-113.
-
(1977)
Gene
, vol.2
, pp. 95-113
-
-
Bolivar, F.1
Rodriguez, R.L.2
Greene, P.J.3
Betlach, M.C.4
Heyneker, H.L.5
Boyer, H.W.6
-
6
-
-
0034622634
-
Attractant regulation of the aspartate receptor-kinase complex: limited cooperative interactions between receptors and effects of the receptor modification state
-
Bornhorst, J.A., and Falke, J.J. (2000) Attractant regulation of the aspartate receptor-kinase complex: limited cooperative interactions between receptors and effects of the receptor modification state. Biochemistry 39: 9486-9493.
-
(2000)
Biochemistry
, vol.39
, pp. 9486-9493
-
-
Bornhorst, J.A.1
Falke, J.J.2
-
7
-
-
70350126125
-
Universal architecture of bacterial chemoreceptor arrays
-
Briegel, A., Ortega, D.R., Tocheva, E.I., Wuichet, K., Li, Z., Chen, S., etal. (2009) Universal architecture of bacterial chemoreceptor arrays. Proc Natl Acad Sci USA 106: 17181-17186.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 17181-17186
-
-
Briegel, A.1
Ortega, D.R.2
Tocheva, E.I.3
Wuichet, K.4
Li, Z.5
Chen, S.6
-
8
-
-
33646597727
-
Loss- and gain-of-function mutations in the F1-HAMP region of the Escherichia coli aerotaxis transducer Aer
-
Burón-Barral, M.C., Gosink, K.K., and Parkinson, J.S. (2006) Loss- and gain-of-function mutations in the F1-HAMP region of the Escherichia coli aerotaxis transducer Aer. J Bacteriol 188: 3477-3486.
-
(2006)
J Bacteriol
, vol.188
, pp. 3477-3486
-
-
Burón-Barral, M.C.1
Gosink, K.K.2
Parkinson, J.S.3
-
9
-
-
77349086674
-
Disruption of chemoreceptor signalling arrays by high levels of CheW, the receptor-kinase coupling protein
-
Cardozo, M.J., Massazza, D.A., Parkinson, J.S., and Studdert, C.A. (2010) Disruption of chemoreceptor signalling arrays by high levels of CheW, the receptor-kinase coupling protein. Mol Microbiol 75: 1171-1181.
-
(2010)
Mol Microbiol
, vol.75
, pp. 1171-1181
-
-
Cardozo, M.J.1
Massazza, D.A.2
Parkinson, J.S.3
Studdert, C.A.4
-
10
-
-
0017807890
-
Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid
-
Chang, A.C., and Cohen, S.N. (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J Bacteriol 134: 1141-1156.
-
(1978)
J Bacteriol
, vol.134
, pp. 1141-1156
-
-
Chang, A.C.1
Cohen, S.N.2
-
11
-
-
19644374667
-
Conserved glycine residues in the cytoplasmic domain of the aspartate receptor play essential roles in kinase coupling and on-off switching
-
Coleman, M.D., Bass, R.B., Mehan, R.S., and Falke, J.J. (2005) Conserved glycine residues in the cytoplasmic domain of the aspartate receptor play essential roles in kinase coupling and on-off switching. Biochemistry 44: 7687-7695.
-
(2005)
Biochemistry
, vol.44
, pp. 7687-7695
-
-
Coleman, M.D.1
Bass, R.B.2
Mehan, R.S.3
Falke, J.J.4
-
12
-
-
0023042506
-
DNA sequence and coding properties of mutD(dnaQ) a dominant Escherichia coli mutator gene
-
Cox, E.C., and Horner, D.L. (1986) DNA sequence and coding properties of mutD(dnaQ) a dominant Escherichia coli mutator gene. J Mol Biol 190: 113-117.
-
(1986)
J Mol Biol
, vol.190
, pp. 113-117
-
-
Cox, E.C.1
Horner, D.L.2
-
13
-
-
13444283382
-
Tryptophan residues flanking the second transmembrane helix (TM2) set the signaling state of the Tar chemoreceptor
-
Draheim, R.R., Bormans, A.F., Lai, R.Z., and Manson, M.D. (2005) Tryptophan residues flanking the second transmembrane helix (TM2) set the signaling state of the Tar chemoreceptor. Biochemistry 44: 1268-1277.
-
(2005)
Biochemistry
, vol.44
, pp. 1268-1277
-
-
Draheim, R.R.1
Bormans, A.F.2
Lai, R.Z.3
Manson, M.D.4
-
14
-
-
0033765068
-
Evolutionary conservation of methyl-accepting chemotaxis protein location in Bacteria and Archaea
-
Gestwicki, J.E., Lamanna, A.C., Harshey, R.M., McCarter, L.L., Kiessling, L.L., and Adler, J. (2000) Evolutionary conservation of methyl-accepting chemotaxis protein location in Bacteria and Archaea. J Bacteriol 182: 6499-6502.
-
(2000)
J Bacteriol
, vol.182
, pp. 6499-6502
-
-
Gestwicki, J.E.1
Lamanna, A.C.2
Harshey, R.M.3
McCarter, L.L.4
Kiessling, L.L.5
Adler, J.6
-
15
-
-
33646544356
-
Signaling interactions between the aerotaxis transducer Aer and heterologous chemoreceptors in Escherichia coli
-
Gosink, K.K., Buron-Barral, M.C., and Parkinson, J.S. (2006) Signaling interactions between the aerotaxis transducer Aer and heterologous chemoreceptors in Escherichia coli. J Bacteriol 188: 3487-3493.
-
(2006)
J Bacteriol
, vol.188
, pp. 3487-3493
-
-
Gosink, K.K.1
Buron-Barral, M.C.2
Parkinson, J.S.3
-
16
-
-
77949917744
-
Bacterial chemoreceptors: providing enhanced features to two-component signaling
-
Hazelbauer, G.L., and Lai, W.C. (2010) Bacterial chemoreceptors: providing enhanced features to two-component signaling. Curr Opin Microbiol 13: 124-132.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 124-132
-
-
Hazelbauer, G.L.1
Lai, W.C.2
-
17
-
-
0024573668
-
Adaptational 'crosstalk' and the crucial role of methylation in chemotactic migration by Escherichia coli
-
Hazelbauer, G.L., Park, C., and Nowlin, D.M. (1989) Adaptational 'crosstalk' and the crucial role of methylation in chemotactic migration by Escherichia coli. Proc Natl Acad Sci USA 86: 1448-1452.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 1448-1452
-
-
Hazelbauer, G.L.1
Park, C.2
Nowlin, D.M.3
-
18
-
-
37749029507
-
Bacterial chemoreceptors: high-performance signaling in networked arrays
-
Hazelbauer, G.L., Falke, J.J., and Parkinson, J.S. (2008) Bacterial chemoreceptors: high-performance signaling in networked arrays. Trends Biochem Sci 33: 9-19.
-
(2008)
Trends Biochem Sci
, vol.33
, pp. 9-19
-
-
Hazelbauer, G.L.1
Falke, J.J.2
Parkinson, J.S.3
-
19
-
-
33748183257
-
The HAMP domain structure implies helix rotation in transmembrane signaling
-
Hulko, M., Berndt, F., Gruber, M., Linder, J.U., Truffault, V., Schultz, A., etal. (2006) The HAMP domain structure implies helix rotation in transmembrane signaling. Cell 126: 929-940.
-
(2006)
Cell
, vol.126
, pp. 929-940
-
-
Hulko, M.1
Berndt, F.2
Gruber, M.3
Linder, J.U.4
Truffault, V.5
Schultz, A.6
-
20
-
-
0001690764
-
Four-helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor
-
Kim, K.K., Yokota, H., and Kim, S.H. (1999) Four-helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor. Nature 400: 787-792.
-
(1999)
Nature
, vol.400
, pp. 787-792
-
-
Kim, K.K.1
Yokota, H.2
Kim, S.H.3
-
21
-
-
78249236863
-
Sensing of environmental signals: classification of chemoreceptors according to the size of their ligand binding regions
-
Lacal, J., Garcia-Fontana, C., Munoz-Martinez, F., Ramos, J.L., and Krell, T. (2010) Sensing of environmental signals: classification of chemoreceptors according to the size of their ligand binding regions. Environ Microbiol 12: 2873-2884.
-
(2010)
Environ Microbiol
, vol.12
, pp. 2873-2884
-
-
Lacal, J.1
Garcia-Fontana, C.2
Munoz-Martinez, F.3
Ramos, J.L.4
Krell, T.5
-
22
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
23
-
-
0030606898
-
Molecular evolution of the C-terminal cytoplasmic domain of a superfamily of bacterial receptors involved in taxis
-
Le Moual, H., and Koshland, D.E., Jr (1996) Molecular evolution of the C-terminal cytoplasmic domain of a superfamily of bacterial receptors involved in taxis. J Mol Biol 261: 568-585.
-
(1996)
J Mol Biol
, vol.261
, pp. 568-585
-
-
Le Moual, H.1
Koshland Jr., D.E.2
-
24
-
-
0034603209
-
Covalent modification regulates ligand binding to receptor complexes in the chemosensory system of Escherichia coli
-
Li, G., and Weis, R.M. (2000) Covalent modification regulates ligand binding to receptor complexes in the chemosensory system of Escherichia coli. Cell 100: 357-365.
-
(2000)
Cell
, vol.100
, pp. 357-365
-
-
Li, G.1
Weis, R.M.2
-
25
-
-
0027476771
-
Polar location of the chemoreceptor complex in the Escherichia coli cell
-
Maddock, J.R., and Shapiro, L. (1993) Polar location of the chemoreceptor complex in the Escherichia coli cell. Science 259: 1717-1723.
-
(1993)
Science
, vol.259
, pp. 1717-1723
-
-
Maddock, J.R.1
Shapiro, L.2
-
26
-
-
79952074202
-
Cross-linking evidence for motional constraints within chemoreceptor trimers of dimers
-
Massazza, D.A., Parkinson, J.S., and Studdert, C.A. (2011) Cross-linking evidence for motional constraints within chemoreceptor trimers of dimers. Biochemistry 50: 820-827.
-
(2011)
Biochemistry
, vol.50
, pp. 820-827
-
-
Massazza, D.A.1
Parkinson, J.S.2
Studdert, C.A.3
-
27
-
-
0017068853
-
cheA, cheB, and cheC genes of Escherichia coli and their role in chemotaxis
-
Parkinson, J.S. (1976) cheA, cheB, and cheC genes of Escherichia coli and their role in chemotaxis. J Bacteriol 126: 758-770.
-
(1976)
J Bacteriol
, vol.126
, pp. 758-770
-
-
Parkinson, J.S.1
-
28
-
-
0019979301
-
Isolation and behavior of Escherichia coli deletion mutants lacking chemotaxis functions
-
Parkinson, J.S., and Houts, S.E. (1982) Isolation and behavior of Escherichia coli deletion mutants lacking chemotaxis functions. J Bacteriol 151: 106-113.
-
(1982)
J Bacteriol
, vol.151
, pp. 106-113
-
-
Parkinson, J.S.1
Houts, S.E.2
-
29
-
-
0033865904
-
Localization of components of the chemotaxis machinery of Escherichia coli using fluorescent protein fusions
-
Sourjik, V., and Berg, H.C. (2000) Localization of components of the chemotaxis machinery of Escherichia coli using fluorescent protein fusions. Mol Microbiol 37: 740-751.
-
(2000)
Mol Microbiol
, vol.37
, pp. 740-751
-
-
Sourjik, V.1
Berg, H.C.2
-
30
-
-
0037039384
-
Receptor sensitivity in bacterial chemotaxis
-
Sourjik, V., and Berg, H.C. (2002) Receptor sensitivity in bacterial chemotaxis. Proc Natl Acad Sci USA 99: 123-127.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 123-127
-
-
Sourjik, V.1
Berg, H.C.2
-
31
-
-
13444301196
-
Adaptation mechanism of the aspartate receptor: electrostatics of the adaptation subdomain play a key role in modulating kinase activity
-
Starrett, D.J., and Falke, J.J. (2005) Adaptation mechanism of the aspartate receptor: electrostatics of the adaptation subdomain play a key role in modulating kinase activity. Biochemistry 44: 1550-1560.
-
(2005)
Biochemistry
, vol.44
, pp. 1550-1560
-
-
Starrett, D.J.1
Falke, J.J.2
-
32
-
-
1242274351
-
Crosslinking snapshots of bacterial chemoreceptor squads
-
Studdert, C.A., and Parkinson, J.S. (2004) Crosslinking snapshots of bacterial chemoreceptor squads. Proc Natl Acad Sci USA 101: 2117-2122.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 2117-2122
-
-
Studdert, C.A.1
Parkinson, J.S.2
-
33
-
-
27344455900
-
Insights into the organization and dynamics of bacterial chemoreceptor clusters through in vivo crosslinking studies
-
Studdert, C.A., and Parkinson, J.S. (2005) Insights into the organization and dynamics of bacterial chemoreceptor clusters through in vivo crosslinking studies. Proc Natl Acad Sci USA 102: 15623-15628.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 15623-15628
-
-
Studdert, C.A.1
Parkinson, J.S.2
-
34
-
-
70349611544
-
Engineered socket study of signaling through a four-helix bundle: evidence for a yin-yang mechanism in the kinase control module of the aspartate receptor
-
Swain, K.E., Gonzalez, M.A., and Falke, J.J. (2009) Engineered socket study of signaling through a four-helix bundle: evidence for a yin-yang mechanism in the kinase control module of the aspartate receptor. Biochemistry 48: 9266-9277.
-
(2009)
Biochemistry
, vol.48
, pp. 9266-9277
-
-
Swain, K.E.1
Gonzalez, M.A.2
Falke, J.J.3
-
35
-
-
0344552313
-
Extended knobs-into-holes packing in classical and complex coiled-coil assemblies
-
Walshaw, J., and Woolfson, D.N. (2003) Extended knobs-into-holes packing in classical and complex coiled-coil assemblies. J Struct Biol 144: 349-361.
-
(2003)
J Struct Biol
, vol.144
, pp. 349-361
-
-
Walshaw, J.1
Woolfson, D.N.2
-
36
-
-
77956634301
-
Origins and diversification of a complex signal transduction system in prokaryotes
-
Wuichet, K., and Zhulin, I.B. (2010) Origins and diversification of a complex signal transduction system in prokaryotes. Sci Signal 3: ra50.
-
(2010)
Sci Signal
, vol.3
-
-
Wuichet, K.1
Zhulin, I.B.2
-
37
-
-
78751475534
-
DifA, a methyl-accepting chemoreceptor protein-like sensory protein, uses a novel signaling mechanism to regulate exopolysaccharide production in Myxococcus xhantus
-
Xu, Q., Black, W.P., Nascimi, H.M., and Yang, Z. (2011) DifA, a methyl-accepting chemoreceptor protein-like sensory protein, uses a novel signaling mechanism to regulate exopolysaccharide production in Myxococcus xhantus. J Bacteriol 193: 759-767.
-
(2011)
J Bacteriol
, vol.193
, pp. 759-767
-
-
Xu, Q.1
Black, W.P.2
Nascimi, H.M.3
Yang, Z.4
-
38
-
-
0027175202
-
The three-dimensional structure of the ligand-binding domain of a wild-type bacterial chemotaxis receptor. Structural comparison to the cross-linked mutant forms and conformational changes upon ligand binding
-
Yeh, J.I., Biemann, H.P., Pandit, J., Koshland, D.E., and Kim, S.H. (1993) The three-dimensional structure of the ligand-binding domain of a wild-type bacterial chemotaxis receptor. Structural comparison to the cross-linked mutant forms and conformational changes upon ligand binding. J Biol Chem 268: 9787-9792.
-
(1993)
J Biol Chem
, vol.268
, pp. 9787-9792
-
-
Yeh, J.I.1
Biemann, H.P.2
Pandit, J.3
Koshland, D.E.4
Kim, S.H.5
-
39
-
-
34247261989
-
Direct visualization of Escherichia coli chemotaxis receptor arrays using cryo-electron microscopy
-
Zhang, P., Khursigara, C.M., Hartnell, L.M., and Subramaniam, S. (2007) Direct visualization of Escherichia coli chemotaxis receptor arrays using cryo-electron microscopy. Proc Natl Acad Sci USA 104: 3777-3781.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 3777-3781
-
-
Zhang, P.1
Khursigara, C.M.2
Hartnell, L.M.3
Subramaniam, S.4
-
40
-
-
79954991359
-
Biphasic control logic of HAMP domain signalling in the Escherichia coli serine chemoreceptor
-
Zhou, Q., Ames, P., and Parkinson, J.S. (2011) Biphasic control logic of HAMP domain signalling in the Escherichia coli serine chemoreceptor. Mol Microbiol 80: 596-611.
-
(2011)
Mol Microbiol
, vol.80
, pp. 596-611
-
-
Zhou, Q.1
Ames, P.2
Parkinson, J.S.3
|