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Volumn 5, Issue , 2011, Pages

DnaA and the timing of chromosome replication in Es-cherichia coli as a function of growth rate

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 83755173946     PISSN: None     EISSN: 17520509     Source Type: Journal    
DOI: 10.1186/1752-0509-5-201     Document Type: Article
Times cited : (23)

References (70)
  • 1
    • 0001577707 scopus 로고
    • The replication of DNA in Escherichia coli
    • Meselson M, Stahl FW. The replication of DNA in Escherichia coli. PNAS 1968, 44:671-682.
    • (1968) PNAS , vol.44 , pp. 671-682
    • Meselson, M.1    Stahl, F.W.2
  • 2
    • 3142679507 scopus 로고    scopus 로고
    • The replication-related organization of bacterial genomes
    • Rocha EPC. The replication-related organization of bacterial genomes. Microbiology 2004, 150(Pt 6):1609-1627.
    • (2004) Microbiology , vol.150 , Issue.PART 6 , pp. 1609-1627
    • Rocha, E.P.C.1
  • 3
    • 0008696244 scopus 로고
    • Autorepressor model for control of DNA replication
    • Sompayrac L, Maaloe O. Autorepressor model for control of DNA replication. Nat New Biol 1973, 241(109):133-135.
    • (1973) Nat New Biol , vol.241 , Issue.109 , pp. 133-135
    • Sompayrac, L.1    Maaloe, O.2
  • 4
    • 0021702482 scopus 로고
    • Initiation of DNA replication in bacteria: analysis of an autorepressor control model
    • 10.1016/S0022-5193(84)80204-0, 6392751
    • Margalit H, Rosenberger RF, Grover NB. Initiation of DNA replication in bacteria: analysis of an autorepressor control model. J Theor Biol 1984, 111:183-199. 10.1016/S0022-5193(84)80204-0, 6392751.
    • (1984) J Theor Biol , vol.111 , pp. 183-199
    • Margalit, H.1    Rosenberger, R.F.2    Grover, N.B.3
  • 5
    • 0025850987 scopus 로고
    • The initiator titration model: computer simulation of chromosome and minichromosome control
    • 10.1016/0923-2508(91)90025-6, 1925015
    • Hansen FG, Christensen BB, Atlung T. The initiator titration model: computer simulation of chromosome and minichromosome control. Research in Microbiology 1991, 142:161-167. 10.1016/0923-2508(91)90025-6, 1925015.
    • (1991) Research in Microbiology , vol.142 , pp. 161-167
    • Hansen, F.G.1    Christensen, B.B.2    Atlung, T.3
  • 6
    • 10644267448 scopus 로고    scopus 로고
    • Robust control of initiation of prokaryotic chromsome replication: essential consideration for a minimal cell
    • 10.1002/bit.20223, 15470709
    • Browning S, Castellanos M, Shuler M. Robust control of initiation of prokaryotic chromsome replication: essential consideration for a minimal cell. Biotechnology and Bioengineering 2004, 88:575-584. 10.1002/bit.20223, 15470709.
    • (2004) Biotechnology and Bioengineering , vol.88 , pp. 575-584
    • Browning, S.1    Castellanos, M.2    Shuler, M.3
  • 7
    • 57749102910 scopus 로고    scopus 로고
    • A novel mechanism for activator-controlled initiation of DNA replication that resolves the auto-regulation sequestration paradox
    • Berlin Springer Verlag, Franzese G, Rubi M
    • Nilsson K, Ehrenberg M. A novel mechanism for activator-controlled initiation of DNA replication that resolves the auto-regulation sequestration paradox. Aspects of Physical Biology, Volume 752 of Lecture Notes in Physics 2008, 189-213. Berlin Springer Verlag, Franzese G, Rubi M.
    • (2008) Aspects of Physical Biology, Volume 752 of Lecture Notes in Physics , pp. 189-213
    • Nilsson, K.1    Ehrenberg, M.2
  • 8
    • 0014413357 scopus 로고
    • Chromosome replication and the division cycle of Escherichia coli B/r
    • 10.1016/0022-2836(68)90425-7, 4866337
    • Cooper S, Helmstetter C. Chromosome replication and the division cycle of Escherichia coli B/r. Journal of Molecular Biology 1968, 31:519-540. 10.1016/0022-2836(68)90425-7, 4866337.
    • (1968) Journal of Molecular Biology , vol.31 , pp. 519-540
    • Cooper, S.1    Helmstetter, C.2
  • 9
    • 0038705074 scopus 로고    scopus 로고
    • Precise determinations of C and D periods by flow cytometry in Escherichia coli K-12 and B/r
    • 10.1099/mic.0.26058-0, 12686642
    • Michelsen O, Teixeira de Mattos MJ, Jensen PR, Hansen FG. Precise determinations of C and D periods by flow cytometry in Escherichia coli K-12 and B/r. Microbiology 2003, 149(4):1001-1010. 10.1099/mic.0.26058-0, 12686642.
    • (2003) Microbiology , vol.149 , Issue.4 , pp. 1001-1010
    • Michelsen, O.1    Teixeira de Mattos, M.J.2    Jensen, P.R.3    Hansen, F.G.4
  • 10
    • 0014405706 scopus 로고
    • Relationships between cell size and time of initiation of DNA replication
    • 10.1038/2191077a0, 4876941
    • Donachie W. Relationships between cell size and time of initiation of DNA replication. Nature 1968, 219:1077-1079. 10.1038/2191077a0, 4876941.
    • (1968) Nature , vol.219 , pp. 1077-1079
    • Donachie, W.1
  • 11
    • 23444443648 scopus 로고
    • The initiation mass for DNA replication in Escherichia coli K-12 is dependent on growth rate
    • 395061, 8187762
    • Wold S, Skarstad K, Steen HB, Stokke T, Boye E. The initiation mass for DNA replication in Escherichia coli K-12 is dependent on growth rate. The EMBO Journal 1994, 13:2097-2102. 395061, 8187762.
    • (1994) The EMBO Journal , vol.13 , pp. 2097-2102
    • Wold, S.1    Skarstad, K.2    Steen, H.B.3    Stokke, T.4    Boye, E.5
  • 12
    • 0030682103 scopus 로고    scopus 로고
    • Does the initiation mass for DNA replication in Escherichia coli vary with growth rate?
    • Cooper S. Does the initiation mass for DNA replication in Escherichia coli vary with growth rate?. MicroCorrespondence 1997, 26:1138-1141.
    • (1997) MicroCorrespondence , vol.26 , pp. 1138-1141
    • Cooper, S.1
  • 13
    • 0041852612 scopus 로고    scopus 로고
    • Coupling the cell cycle to cell growth
    • 10.1038/sj.embor.embor895, 1326335, 12897798
    • Boye E, Nordstrøm K. Coupling the cell cycle to cell growth. EMBO Rep 2003, 4(8):757-760. 10.1038/sj.embor.embor895, 1326335, 12897798.
    • (2003) EMBO Rep , vol.4 , Issue.8 , pp. 757-760
    • Boye, E.1    Nordstrøm, K.2
  • 14
    • 20444390654 scopus 로고    scopus 로고
    • Chromosome and replisome dynamics in E. coli: loss of sister cohesion triggers global chromosome movement and mediates chromosome segregation
    • 10.1016/j.cell.2005.04.013, 2973560, 15960977
    • Bates D, Kleckner N. Chromosome and replisome dynamics in E. coli: loss of sister cohesion triggers global chromosome movement and mediates chromosome segregation. Cell 2005, 121(6):899-911. 10.1016/j.cell.2005.04.013, 2973560, 15960977.
    • (2005) Cell , vol.121 , Issue.6 , pp. 899-911
    • Bates, D.1    Kleckner, N.2
  • 15
    • 0024402876 scopus 로고
    • The DnaA protein determines the initiation mass of Escherichia coli K-12
    • 10.1016/0092-8674(89)90802-7, 2541928
    • Løbner-Olesen A, Skarstad K, Hansen FG, von Meyenburg K, Boye E. The DnaA protein determines the initiation mass of Escherichia coli K-12. Cell 1989, 57(5):881-889. 10.1016/0092-8674(89)90802-7, 2541928.
    • (1989) Cell , vol.57 , Issue.5 , pp. 881-889
    • Løbner-Olesen, A.1    Skarstad, K.2    Hansen, F.G.3    von Meyenburg, K.4    Boye, E.5
  • 16
    • 0026322679 scopus 로고
    • Initiator (DnaA) protein concentration as a function of growth rate in Escherichia coli and Salmonella typhimurium
    • 208213, 1860829
    • Hansen F, Atlung T, Braun R, Wright A, Hughes P, Kohiyama M. Initiator (DnaA) protein concentration as a function of growth rate in Escherichia coli and Salmonella typhimurium. Journal of Bacteriology 1991, 173(16):5194-5199. 208213, 1860829.
    • (1991) Journal of Bacteriology , vol.173 , Issue.16 , pp. 5194-5199
    • Hansen, F.1    Atlung, T.2    Braun, R.3    Wright, A.4    Hughes, P.5    Kohiyama, M.6
  • 18
    • 0035869023 scopus 로고    scopus 로고
    • Mechanism of origin unwinding: sequential binding of DnaA to double-and single-stranded DNA
    • 10.1093/emboj/20.6.1469, 145534, 11250912
    • Speck C, Messer W. Mechanism of origin unwinding: sequential binding of DnaA to double-and single-stranded DNA. The EMBO Journal 2001, 20:1469-1476. 10.1093/emboj/20.6.1469, 145534, 11250912.
    • (2001) The EMBO Journal , vol.20 , pp. 1469-1476
    • Speck, C.1    Messer, W.2
  • 19
    • 0036843139 scopus 로고    scopus 로고
    • The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication
    • Messer W. The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication. FEMS Microbiology Reviews 2002, 26:355-374.
    • (2002) FEMS Microbiology Reviews , vol.26 , pp. 355-374
    • Messer, W.1
  • 20
    • 0024720337 scopus 로고
    • Expression of Escherichia coli dnaA and mioC genes as a function of growth rate
    • 210201, 2546917
    • Chiaramello AE, Zyskind JW. Expression of Escherichia coli dnaA and mioC genes as a function of growth rate. Journal of Bacteriology 1989, 171:4272-4280. 210201, 2546917.
    • (1989) Journal of Bacteriology , vol.171 , pp. 4272-4280
    • Chiaramello, A.E.1    Zyskind, J.W.2
  • 21
    • 0023152226 scopus 로고
    • Over-production of DnaA protein stimulates initiation of chromosome and minichromosome replication in E. coli
    • Atlung TA, Løbner-Olesen A, Hansen FG. Over-production of DnaA protein stimulates initiation of chromosome and minichromosome replication in E. coli. Molecular Genomics and Genetics 1987, 206:51-59.
    • (1987) Molecular Genomics and Genetics , vol.206 , pp. 51-59
    • Atlung, T.A.1    Løbner-Olesen, A.2    Hansen, F.G.3
  • 22
    • 0022343006 scopus 로고
    • Initiation of chromosome replication in Escherichia coli after induction of dnaA gene expression from a lac promoter
    • 214341, 2997138
    • Bremer H, Churchward G. Initiation of chromosome replication in Escherichia coli after induction of dnaA gene expression from a lac promoter. J Bacteriol 1985, 164(2):922-924. 214341, 2997138.
    • (1985) J Bacteriol , vol.164 , Issue.2 , pp. 922-924
    • Bremer, H.1    Churchward, G.2
  • 23
    • 0023884932 scopus 로고
    • Sequential early stages in the in vitro initiation of replication at the origin of the Escherichia coli chromosome
    • Sekimizu K, Bramhill D, Kornberg A. Sequential early stages in the in vitro initiation of replication at the origin of the Escherichia coli chromosome. The Journal of Biological Chemistry 1988, 263:7124-7130.
    • (1988) The Journal of Biological Chemistry , vol.263 , pp. 7124-7130
    • Sekimizu, K.1    Bramhill, D.2    Kornberg, A.3
  • 24
    • 0037676101 scopus 로고    scopus 로고
    • Coupling the initiation of chromosome replication to cell size in Escherichia coli
    • 10.1016/S1369-5274(03)00026-2, 12732304
    • Donachie W, Blakely G. Coupling the initiation of chromosome replication to cell size in Escherichia coli. Current Opinion in Microbiology 2003, 6:146-150. 10.1016/S1369-5274(03)00026-2, 12732304.
    • (2003) Current Opinion in Microbiology , vol.6 , pp. 146-150
    • Donachie, W.1    Blakely, G.2
  • 25
    • 0033485526 scopus 로고    scopus 로고
    • Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli
    • 10.1093/emboj/18.23.6642, 1171727, 10581238
    • Kurokawa K, Nishida S, Emoto A, Sekimizu K, Katayama T. Replication cycle-coordinated change of the adenine nucleotide-bound forms of DnaA protein in Escherichia coli. The EMBO Journal 1999, 18:6642-6652. 10.1093/emboj/18.23.6642, 1171727, 10581238.
    • (1999) The EMBO Journal , vol.18 , pp. 6642-6652
    • Kurokawa, K.1    Nishida, S.2    Emoto, A.3    Sekimizu, K.4    Katayama, T.5
  • 26
    • 0036015656 scopus 로고    scopus 로고
    • The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli
    • 10.1046/j.1365-2958.2002.02969.x, 12068813
    • Ogawa T, Yamada Y, Kuroda T, Kishi T, Moriya S. The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli. Molecular Microbiology 2002, 44(5):1367-1375. 10.1046/j.1365-2958.2002.02969.x, 12068813.
    • (2002) Molecular Microbiology , vol.44 , Issue.5 , pp. 1367-1375
    • Ogawa, T.1    Yamada, Y.2    Kuroda, T.3    Kishi, T.4    Moriya, S.5
  • 27
    • 0035980252 scopus 로고    scopus 로고
    • Regulation of chromosomal replication by DnaA protein availability in Escherichia coli: effects of the datA region
    • Morigen, Boye E, Skarstad K, Løbner-Olesen A. Regulation of chromosomal replication by DnaA protein availability in Escherichia coli: effects of the datA region. Biochimica et Biophysica Acta 2001, 1521:73-80.
    • (2001) Biochimica et Biophysica Acta , vol.1521 , pp. 73-80
    • Morigen, B.E.1    Skarstad, K.2    Løbner-Olesen, A.3
  • 29
    • 0029998531 scopus 로고    scopus 로고
    • Coordinating DNA replication initiation with cell growth: differential roles for DnaA and SeqA proteins
    • 10.1073/pnas.93.22.12206, 37968, 8901558
    • Boye E, Stokke T, Kleckner N, Skarstad K. Coordinating DNA replication initiation with cell growth: differential roles for DnaA and SeqA proteins. PNAS 1996, 93:12206-12211. 10.1073/pnas.93.22.12206, 37968, 8901558.
    • (1996) PNAS , vol.93 , pp. 12206-12211
    • Boye, E.1    Stokke, T.2    Kleckner, N.3    Skarstad, K.4
  • 30
    • 33845706833 scopus 로고    scopus 로고
    • Changes of initiation mass and cell dimensions by the 'eclipse'
    • 10.1111/j.1365-2958.2006.05501.x, 17140410
    • Zaritsky ARA, Vischer N. Changes of initiation mass and cell dimensions by the 'eclipse'. Molecular microbiology 2007, 63:15-21. 10.1111/j.1365-2958.2006.05501.x, 17140410.
    • (2007) Molecular microbiology , vol.63 , pp. 15-21
    • Zaritsky, A.R.A.1    Vischer, N.2
  • 32
    • 0030782227 scopus 로고    scopus 로고
    • Role of architectural elements in combinatorial regulation of initiation of DNA replication in Escherichia coli
    • 10.1046/j.1365-2958.1997.5701931.x, 9383152
    • Polaczek P, Kwan K, Liberies DA, Campbell JL. Role of architectural elements in combinatorial regulation of initiation of DNA replication in Escherichia coli. Mol Microbiol 1997, 26(2):261-275. 10.1046/j.1365-2958.1997.5701931.x, 9383152.
    • (1997) Mol Microbiol , vol.26 , Issue.2 , pp. 261-275
    • Polaczek, P.1    Kwan, K.2    Liberies, D.A.3    Campbell, J.L.4
  • 33
    • 0025158321 scopus 로고
    • Regulation of expression of the dnaA gene in Escherichia coli: role of the two promoters and the DnaA box
    • Polaczek P, Wright A. Regulation of expression of the dnaA gene in Escherichia coli: role of the two promoters and the DnaA box. New Biol 1990, 2(6):574-582.
    • (1990) New Biol , vol.2 , Issue.6 , pp. 574-582
    • Polaczek, P.1    Wright, A.2
  • 34
    • 0023083815 scopus 로고
    • Titration of DnaA protein by oriC DnaA-boxes increases dnaA gene expression in Escherichia coli
    • 553385, 3034578
    • Hansen FG, Koefoed S, Sorensen L, Atlung T. Titration of DnaA protein by oriC DnaA-boxes increases dnaA gene expression in Escherichia coli. The EMBO Journal 1987, 6:255-258. 553385, 3034578.
    • (1987) The EMBO Journal , vol.6 , pp. 255-258
    • Hansen, F.G.1    Koefoed, S.2    Sorensen, L.3    Atlung, T.4
  • 35
    • 0032957449 scopus 로고    scopus 로고
    • DnaA boxes are important elements in setting the initiation mass of Escherichia coli
    • 93705, 10217754
    • Christensen BB, Atlung T, Hansen FG. DnaA boxes are important elements in setting the initiation mass of Escherichia coli. Journal of Bacteriology 1999, 181:2683-2688. 93705, 10217754.
    • (1999) Journal of Bacteriology , vol.181 , pp. 2683-2688
    • Christensen, B.B.1    Atlung, T.2    Hansen, F.G.3
  • 36
    • 0030003443 scopus 로고    scopus 로고
    • A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome
    • 10.1046/j.1365-2958.1996.453983.x, 8830270
    • Kitagawa R, Mitsuki H, Okazaki T, Ogawa T. A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome. Molecular Microbiology 1996, 19:1137-1147. 10.1046/j.1365-2958.1996.453983.x, 8830270.
    • (1996) Molecular Microbiology , vol.19 , pp. 1137-1147
    • Kitagawa, R.1    Mitsuki, H.2    Okazaki, T.3    Ogawa, T.4
  • 37
    • 33746604804 scopus 로고    scopus 로고
    • Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome
    • 10.1101/gad.379506, 1536062, 16882985
    • Riber L, Olsson JA, Jensen RB, Skovgaard O, Dasgupta S, Marinus MG, Løbner-Olesen A. Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome. Genes and Development 2006, 20:2121-2134. 10.1101/gad.379506, 1536062, 16882985.
    • (2006) Genes and Development , vol.20 , pp. 2121-2134
    • Riber, L.1    Olsson, J.A.2    Jensen, R.B.3    Skovgaard, O.4    Dasgupta, S.5    Marinus, M.G.6    Løbner-Olesen, A.7
  • 38
    • 0028240462 scopus 로고
    • Hyperactive initiation of chromosomal replication in vivo and in vitro by a mutant initiator protein, DnaAcos, of Escherichia coli
    • Katayama T, Kornberg A. Hyperactive initiation of chromosomal replication in vivo and in vitro by a mutant initiator protein, DnaAcos, of Escherichia coli. J Biol Chem 1994, 269(17):12698-12703.
    • (1994) J Biol Chem , vol.269 , Issue.17 , pp. 12698-12703
    • Katayama, T.1    Kornberg, A.2
  • 39
    • 77953523412 scopus 로고    scopus 로고
    • DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli
    • 10.1111/j.1365-2958.2010.07185.x, 20487274
    • Olliver A, Saggioro C, Herrick J, Sclavi B. DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli. Mol Microbiol 2010, 76(6):1555-1571. 10.1111/j.1365-2958.2010.07185.x, 20487274.
    • (2010) Mol Microbiol , vol.76 , Issue.6 , pp. 1555-1571
    • Olliver, A.1    Saggioro, C.2    Herrick, J.3    Sclavi, B.4
  • 40
    • 0000640710 scopus 로고    scopus 로고
    • Modulation of chemical composition and other parameters of the cell by growth rate
    • Washington, DC: American Society for Microbiology, Neidhardt F
    • Bremer H, Dennis P. Modulation of chemical composition and other parameters of the cell by growth rate. Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology 1996, 1553-1569. Washington, DC: American Society for Microbiology, Neidhardt F.
    • (1996) Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology , pp. 1553-1569
    • Bremer, H.1    Dennis, P.2
  • 41
    • 58149527756 scopus 로고    scopus 로고
    • Growth-rate-dependent partitioning of RNA polymerases in bacteria
    • 10.1073/pnas.0804953105, 2629260, 19073937
    • Klumpp S, Hwa T. Growth-rate-dependent partitioning of RNA polymerases in bacteria. PNAS 2008, 105:20245-20250. 10.1073/pnas.0804953105, 2629260, 19073937.
    • (2008) PNAS , vol.105 , pp. 20245-20250
    • Klumpp, S.1    Hwa, T.2
  • 43
    • 0022429106 scopus 로고
    • The OR control system of bacteriophage lambda, a physical-chemical model for gene regulation
    • 10.1016/0022-2836(85)90086-5, 3157005
    • Shea MA, Ackers GK. The OR control system of bacteriophage lambda, a physical-chemical model for gene regulation. Journal of Molecular Biology 1985, 181:211-230. 10.1016/0022-2836(85)90086-5, 3157005.
    • (1985) Journal of Molecular Biology , vol.181 , pp. 211-230
    • Shea, M.A.1    Ackers, G.K.2
  • 44
    • 0001422329 scopus 로고
    • Quantative model for gene regulation by λ phage repressor
    • 10.1073/pnas.79.4.1129, 345914, 6461856
    • Ackers GK, Johnson AD, Shea MA. Quantative model for gene regulation by λ phage repressor. PNAS 1982, 79:1129-1133. 10.1073/pnas.79.4.1129, 345914, 6461856.
    • (1982) PNAS , vol.79 , pp. 1129-1133
    • Ackers, G.K.1    Johnson, A.D.2    Shea, M.A.3
  • 45
    • 29744460566 scopus 로고    scopus 로고
    • Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication
    • 10.1038/sj.embor.7400467, 1369143, 16041320
    • Camara JE, Breier AM, Brendler T, Austin S, Cozzarelli NR, Crooke E. Hda inactivation of DnaA is the predominant mechanism preventing hyperinitiation of Escherichia coli DNA replication. EMBO Reports 2005, 6:736-741. 10.1038/sj.embor.7400467, 1369143, 16041320.
    • (2005) EMBO Reports , vol.6 , pp. 736-741
    • Camara, J.E.1    Breier, A.M.2    Brendler, T.3    Austin, S.4    Cozzarelli, N.R.5    Crooke, E.6
  • 46
    • 0141630791 scopus 로고
    • On the specificity of DNA-protein interactions
    • 10.1073/pnas.83.6.1608, 323132, 3456604
    • von Hippel PH, Berg OG. On the specificity of DNA-protein interactions. Proc Natl Acad Sci USA 1986, 83(6):1608-1612. 10.1073/pnas.83.6.1608, 323132, 3456604.
    • (1986) Proc Natl Acad Sci USA , vol.83 , Issue.6 , pp. 1608-1612
    • von Hippel, P.H.1    Berg, O.G.2
  • 48
    • 79960943853 scopus 로고    scopus 로고
    • Bacterial growth laws and their applications
    • Scott M, Hwa T. Bacterial growth laws and their applications. Curr Opin Biotechnol 2011,
    • (2011) Curr Opin Biotechnol
    • Scott, M.1    Hwa, T.2
  • 49
    • 78449268845 scopus 로고    scopus 로고
    • Interdependence of cell growth and gene expression: origins and consequences
    • 10.1126/science.1192588, 21097934
    • Scott M, Gunderson CW, Mateescu EM, Zhang Z, Hwa T. Interdependence of cell growth and gene expression: origins and consequences. Science 2010, 330(6007):1099-1102. 10.1126/science.1192588, 21097934.
    • (2010) Science , vol.330 , Issue.6007 , pp. 1099-1102
    • Scott, M.1    Gunderson, C.W.2    Mateescu, E.M.3    Zhang, Z.4    Hwa, T.5
  • 50
    • 20444496103 scopus 로고    scopus 로고
    • Deletion of the datA site does not affect once-per-cell-cycle timing but induces rifampin-resistant replication
    • 10.1128/JB.187.12.3913-3920.2005, 1151742, 15939703
    • Morigen, Molina F, Skarstad K. Deletion of the datA site does not affect once-per-cell-cycle timing but induces rifampin-resistant replication. J Bacteriol 2005, 187(12):3913-3920. 10.1128/JB.187.12.3913-3920.2005, 1151742, 15939703.
    • (2005) J Bacteriol , vol.187 , Issue.12 , pp. 3913-3920
    • Morigen, M.F.1    Skarstad, K.2
  • 51
    • 0031897521 scopus 로고    scopus 로고
    • High-affinity binding sites for the initiator protein DnaA on the chromosome of Escherichia coli
    • 10.1046/j.1365-2958.1998.00813.x, 9622363
    • Roth A, Messer W. High-affinity binding sites for the initiator protein DnaA on the chromosome of Escherichia coli. Mol Microbiol 1998, 28(2):395-401. 10.1046/j.1365-2958.1998.00813.x, 9622363.
    • (1998) Mol Microbiol , vol.28 , Issue.2 , pp. 395-401
    • Roth, A.1    Messer, W.2
  • 52
    • 66149097454 scopus 로고    scopus 로고
    • Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA
    • 10.1101/gad.1775809, 2685538, 19401329
    • Fujimitsu K, Senriuchi T, Katayama T. Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev 2009, 23(10):1221-1233. 10.1101/gad.1775809, 2685538, 19401329.
    • (2009) Genes Dev , vol.23 , Issue.10 , pp. 1221-1233
    • Fujimitsu, K.1    Senriuchi, T.2    Katayama, T.3
  • 54
    • 73449149110 scopus 로고    scopus 로고
    • Invariant distribution of promoter activities in Escherichia coli
    • 10.1371/journal.pcbi.1000545, 2758578, 19851443
    • Zaslaver A, Kaplan S, Bren A, Jinich A, Mayo A, Dekel E, Alon U, Itzkovitz S. Invariant distribution of promoter activities in Escherichia coli. PLoS Comput Biol 2009, 5(10):e1000545. 10.1371/journal.pcbi.1000545, 2758578, 19851443.
    • (2009) PLoS Comput Biol , vol.5 , Issue.10
    • Zaslaver, A.1    Kaplan, S.2    Bren, A.3    Jinich, A.4    Mayo, A.5    Dekel, E.6    Alon, U.7    Itzkovitz, S.8
  • 55
    • 0001140586 scopus 로고
    • Dependency on medium and temperature of cell size and chemical composition during balanced growth of Salmonella typhimurium
    • Schaechter M, Maaloe O, Kjeldgaard NO. Dependency on medium and temperature of cell size and chemical composition during balanced growth of Salmonella typhimurium. Journal of General Microbiology 1958, 19(3):592-606.
    • (1958) Journal of General Microbiology , vol.19 , Issue.3 , pp. 592-606
    • Schaechter, M.1    Maaloe, O.2    Kjeldgaard, N.O.3
  • 56
    • 72249097352 scopus 로고    scopus 로고
    • Growth rate-dependent global effects on gene expression in bacteria
    • 10.1016/j.cell.2009.12.001, 2818994, 20064380
    • Klumpp S, Zhang Z, Hwa T. Growth rate-dependent global effects on gene expression in bacteria. Cell 2009, 139(7):1366-1375. 10.1016/j.cell.2009.12.001, 2818994, 20064380.
    • (2009) Cell , vol.139 , Issue.7 , pp. 1366-1375
    • Klumpp, S.1    Zhang, Z.2    Hwa, T.3
  • 57
    • 76949086750 scopus 로고    scopus 로고
    • Regulation of the replication cycle: conserved and diverse regulatory systems for DnaA and oriC
    • 10.1038/nrmicro2314, 20157337
    • Katayama T, Ozaki S, Keyamura K, Fujimitsu K. Regulation of the replication cycle: conserved and diverse regulatory systems for DnaA and oriC. Nat Rev Microbiol 2010, 8(3):163-170. 10.1038/nrmicro2314, 20157337.
    • (2010) Nat Rev Microbiol , vol.8 , Issue.3 , pp. 163-170
    • Katayama, T.1    Ozaki, S.2    Keyamura, K.3    Fujimitsu, K.4
  • 58
    • 79960584723 scopus 로고    scopus 로고
    • Replication and segregation of an Escherichia coli chromosome with two replication origins
    • 10.1073/pnas.1100874108, 3127894, 21670292
    • Wang X, Lesterlin C, Reyes-Lamothe R, Ball G, Sherratt DJ. Replication and segregation of an Escherichia coli chromosome with two replication origins. Proc Natl Acad Sci USA 2011, 108(26):E243-E250. 10.1073/pnas.1100874108, 3127894, 21670292.
    • (2011) Proc Natl Acad Sci USA , vol.108 , Issue.26
    • Wang, X.1    Lesterlin, C.2    Reyes-Lamothe, R.3    Ball, G.4    Sherratt, D.J.5
  • 59
    • 79551674959 scopus 로고    scopus 로고
    • Suppressors of DnaA(ATP) imposed overinitiation in Escherichia coli
    • 10.1111/j.1365-2958.2010.07493.x, 21299647
    • Charbon G, Riber L, Cohen M, Skovgaard O, Fujimitsu K, Katayama T, Løbner-Olesen A. Suppressors of DnaA(ATP) imposed overinitiation in Escherichia coli. Mol Microbiol 2011, 79(4):914-928. 10.1111/j.1365-2958.2010.07493.x, 21299647.
    • (2011) Mol Microbiol , vol.79 , Issue.4 , pp. 914-928
    • Charbon, G.1    Riber, L.2    Cohen, M.3    Skovgaard, O.4    Fujimitsu, K.5    Katayama, T.6    Løbner-Olesen, A.7
  • 60
    • 56949098506 scopus 로고    scopus 로고
    • Molecular titration and ultrasensitivity in regulatory networks
    • 10.1016/j.jmb.2008.09.079, 18938177
    • Buchler NE, Louis M. Molecular titration and ultrasensitivity in regulatory networks. J Mol Biol 2008, 384(5):1106-1119. 10.1016/j.jmb.2008.09.079, 18938177.
    • (2008) J Mol Biol , vol.384 , Issue.5 , pp. 1106-1119
    • Buchler, N.E.1    Louis, M.2
  • 61
    • 0033559974 scopus 로고    scopus 로고
    • Distribution of minichromosomes in individual Escherichia coli cells: implications for replication control
    • 10.1093/emboj/18.6.1712, 1171257, 10075940
    • Løbner-Olesen A. Distribution of minichromosomes in individual Escherichia coli cells: implications for replication control. EMBO J 1999, 18(6):1712-1721. 10.1093/emboj/18.6.1712, 1171257, 10075940.
    • (1999) EMBO J , vol.18 , Issue.6 , pp. 1712-1721
    • Løbner-Olesen, A.1
  • 62
  • 63
    • 0027436353 scopus 로고
    • Transcription and DNA supercoiling
    • 10.1016/S0959-437X(05)80096-6, 8274860
    • Wang JC, Lynch AS. Transcription and DNA supercoiling. Current Opinion in Genetics and Development 1993, 3:764-768. 10.1016/S0959-437X(05)80096-6, 8274860.
    • (1993) Current Opinion in Genetics and Development , vol.3 , pp. 764-768
    • Wang, J.C.1    Lynch, A.S.2
  • 64
    • 0023430342 scopus 로고
    • Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coli
    • 213814, 3308843
    • Balke VL, Gralla JD. Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coli. J Bacteriol 1987, 169(10):4499-4506. 213814, 3308843.
    • (1987) J Bacteriol , vol.169 , Issue.10 , pp. 4499-4506
    • Balke, V.L.1    Gralla, J.D.2
  • 65
    • 60349097837 scopus 로고    scopus 로고
    • DnaA protein interacts with RNA polymerase and partially protects it from the effect of rifampicin
    • 10.1111/j.1365-2958.2008.06585.x, 19170875
    • Flåtten I, Morigen, Skarstad K. DnaA protein interacts with RNA polymerase and partially protects it from the effect of rifampicin. Molecular microbiology 2009, 71(4):1018-30. 10.1111/j.1365-2958.2008.06585.x, 19170875.
    • (2009) Molecular microbiology , vol.71 , Issue.4 , pp. 1018-1030
    • Flåtten, I.1    Morigen2    Skarstad, K.3
  • 66
    • 13444288385 scopus 로고    scopus 로고
    • DNA supercoiling - a global transcriptional regulator for enterobacterial growth?
    • 10.1038/nrmicro1088, 15685225
    • Travers A, Muskhelishvili G. DNA supercoiling - a global transcriptional regulator for enterobacterial growth?. Nat Rev Microbiol 2005, 3(2):157-169. 10.1038/nrmicro1088, 15685225.
    • (2005) Nat Rev Microbiol , vol.3 , Issue.2 , pp. 157-169
    • Travers, A.1    Muskhelishvili, G.2
  • 67
    • 14544304071 scopus 로고    scopus 로고
    • Regulated degradation of chromosome replication proteins DnaA and CtrA in Caulobacter crescentus
    • Gorbatyuk B, Marczynski GT. Regulated degradation of chromosome replication proteins DnaA and CtrA in Caulobacter crescentus. Mol Microbiol 2005, 55(4):1233-1245.
    • (2005) Mol Microbiol , vol.55 , Issue.4 , pp. 1233-1245
    • Gorbatyuk, B.1    Marczynski, G.T.2
  • 68
    • 69949102238 scopus 로고    scopus 로고
    • Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter
    • 10.1128/JB.00525-09, 2737981, 19633089
    • Collier J, Shapiro L. Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter. J Bacteriol 2009, 191(18):5706-5716. 10.1128/JB.00525-09, 2737981, 19633089.
    • (2009) J Bacteriol , vol.191 , Issue.18 , pp. 5706-5716
    • Collier, J.1    Shapiro, L.2
  • 69
    • 33645462018 scopus 로고    scopus 로고
    • The intrinsic ATPase activity of Mycobacterium tuberculosis DnaA promotes rapid oligomerization of DnaA on oriC
    • 10.1111/j.1365-2958.2006.05068.x, 16553890
    • Madiraju MVVS, Moomey M, Neuenschwander PF, Muniruzzaman S, Yamamoto K, Grimwade JE, Rajagopalan M. The intrinsic ATPase activity of Mycobacterium tuberculosis DnaA promotes rapid oligomerization of DnaA on oriC. Mol Microbiol 2006, 59(6):1876-1890. 10.1111/j.1365-2958.2006.05068.x, 16553890.
    • (2006) Mol Microbiol , vol.59 , Issue.6 , pp. 1876-1890
    • Madiraju, M.V.V.S.1    Moomey, M.2    Neuenschwander, P.F.3    Muniruzzaman, S.4    Yamamoto, K.5    Grimwade, J.E.6    Rajagopalan, M.7
  • 70
    • 57449110975 scopus 로고    scopus 로고
    • Stochasticity and traffic jams in the transcription of ribosomal RNA: Intriguing role of termination and antitermination
    • 10.1073/pnas.0806084105, 2587539, 19017803
    • Klumpp S, Hwa T. Stochasticity and traffic jams in the transcription of ribosomal RNA: Intriguing role of termination and antitermination. PNAS 2008, 105:18159-18164. 10.1073/pnas.0806084105, 2587539, 19017803.
    • (2008) PNAS , vol.105 , pp. 18159-18164
    • Klumpp, S.1    Hwa, T.2


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