Elf5 regulation in the Trophectoderm

Developmental Biology

Volumn 360, Issue 2, 2011, Pages 343-350

  Pearton, David J ^a   Broadhurst, Ric ^a   Donnison, Martyn ^a   Pfeffer, Peter L ^a  

^a RUAKURA RESEARCH CENTRE   (New Zealand)

Author keywords

Cattle; Elf5; Enhancer; Extraembryonic ectoderm; Promoter; Trophectoderm

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR ELF5; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; CATTLE; CONTROLLED STUDY; DIFFERENTIALLY METHYLATED REGION; ECTODERM; ECTOPLACENTAL CONE; EMBRYO; EMBRYONIC STRUCTURES; ENHANCER REGION; EPIGENETICS; GASTRULATION; GERM LAYER; INTRON; MOUSE; MOUSE EMBRYO; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; REGULATORY SEQUENCE; SKIN; TRANSGENIC MOUSE; TROPHECTODERM;

BOS; MAMMALIA;

EID: 82555176591     PISSN: 00121606     EISSN: 1095564X     Source Type: Journal    
DOI: 10.1016/j.ydbio.2011.10.007     Document Type: Article

References (39)

1. Barski A., et al. High-resolution profiling of histone methylations in the human genome. Cell 2007, 129:823-837.
2. Berg D.K., et al. Trophectoderm lineage determination in cattle. Dev. Cell 2011, 20:244-255.
3. Bulger M., Groudine M. Functional and mechanistic diversity of distal transcription enhancers. Cell 2011, 144:327-339.
4. Butler J.E., Kadonaga J.T. Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs. Genes Dev. 2001, 15:2515-2519.
5. Calhoun V.C., Levine M. Long-range enhancer-promoter interactions in the Scr-Antp interval of the Drosophila Antennapedia complex. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:9878-9883.
6. Choi Y.S., et al. Generation and analysis of Elf5-LacZ mouse: unique and dynamic expression of Elf5 (ESE-2) in the inner root sheath of cycling hair follicles. Histochem. Cell Biol. 2008, 129:85-94.
7. Donnison M., et al. Loss of the extraembryonic ectoderm in Elf5 mutants leads to defects in embryonic patterning. Development 2005, 132:2299-2308.
8. Fong Y.W., Zhou Q. Stimulatory effect of splicing factors on transcriptional elongation. Nature 2001, 414:929-933.
9. Frankel N., et al. Phenotypic robustness conferred by apparently redundant transcriptional enhancers. Nature 2010, 466:490-493.
10. Gardner R.L. Clonal analysis of early mammalian development. Philos. Trans. R. Soc. Lond. B Biol. Sci. 1985, 312:163-178.
11. Hallikas O., et al. Genome-wide prediction of mammalian enhancers based on analysis of transcription-factor binding affinity. Cell 2006, 124:47-59.
12. Hashizume K., et al. Bovine trophoblast cell culture systems: a technique to culture bovine trophoblast cells without feeder cells. Methods Mol. Med. 2006, 121:179-188.
13. Heintzman N.D., et al. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat. Genet. 2007, 39:311-318.
14. Hollenhorst P.C., et al. Genomic and biochemical insights into the specificity of ETS transcription factors. Annu. Rev. Biochem. 2011, 80:437-471.
15. Lapinskas E.J., et al. A major site of expression of the ets transcription factor Elf5 is epithelia of exocrine glands. Histochem. Cell Biol. 2004, 122:521-526.
16. Liu P., et al. A highly efficient recombineering-based method for generating conditional knockout mutations. Genome Res. 2003, 13:476-484.
17. Metzger D.E., et al. Elf5 is an epithelium-specific, fibroblast growth factor-sensitive transcription factor in the embryonic lung. Dev. Dyn. 2007, 236:1175-1192.
18. Metzger D.E., et al. Misexpression of ELF5 disrupts lung branching and inhibits epithelial differentiation. Dev. Biol. 2008, 320:149-160.
19. Muyrers J.P., et al. Rapid modification of bacterial artificial chromosomes by ET-recombination. Nucleic Acids Res. 1999, 27:1555-1557.
20. Nelson J., et al. The fast chromatin immunoprecipitation method. Methods Mol. Biol. 2009, 567:45-57.
21. Ng R.K., et al. Epigenetic restriction of embryonic cell lineage fate by methylation of Elf5. Nat. Cell Biol. 2008, 10:1280-1290.
22. Nishiyama A., et al. Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors. Cell Stem Cell 2009, 5:420-433.
23. Nott A., et al. Splicing enhances translation in mammalian cells: an additional function of the exon junction complex. Genes Dev. 2004, 18:210-222.
24. Oakes S.R., et al. The Ets transcription factor Elf5 specifies mammary alveolar cell fate. Genes Dev. 2008, 22:581-586.
25. Ovcharenko I., et al. ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes. Nucleic Acids Res. 2004, 32:W280-W286.
26. Peter I.S., Davidson E.H. Evolution of gene regulatory networks controlling body plan development. Cell 2011, 144:970-985.
27. Pfeffer P.L., et al. Pax2 and homeodomain proteins cooperatively regulate a 435 bp enhancer of the mouse Pax5 gene at the midbrain-hindbrain boundary. Development 2000, 127:1017-1028.
28. Rada-Iglesias A., et al. A unique chromatin signature uncovers early developmental enhancers in humans. Nature 2011, 470:279-283.
29. Sandelin A., et al. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic Acids Res. 2004, 32:D91-D94.
30. Sharrocks A.D. The ETS-domain transcription factor family. Nat. Rev. Mol. Cell Biol. 2001, 2:827-837.
31. Simmons D.G., Cross J.C. Determinants of trophoblast lineage and cell subtype specification in the mouse placenta. Dev. Biol. 2005, 284:12-24.
32. Smith C., et al. Simultaneous gene quantitation of multiple genes in individual bovine nuclear transfer blastocysts. Reproduction 2007, 133:231-242.
33. Smith C.S., et al. Nuclear transfer-specific defects are not apparent during the second week of embryogenesis in cattle. Cell. Reprogram. 2010, 12:699-707.
34. Strumpf D., et al. Cdx2 is required for correct cell fate specification and differentiation of trophectoderm in the mouse blastocyst. Development 2005, 132:2093-2102.
35. Suwinska A., et al. Blastomeres of the mouse embryo lose totipotency after the fifth cleavage division: expression of Cdx2 and Oct4 and developmental potential of inner and outer blastomeres of 16- and 32-cell embryos. Dev. Biol. 2008, 322:133-144.
36. Talbot N.C., et al. Bovine blastocyst-derived trophectoderm and endoderm cell cultures: interferon tau and transferrin expression as respective in vitro markers. Biol. Reprod. 2000, 62:235-247.
37. Tanaka S., et al. Promotion of trophoblast stem cell proliferation by FGF4. Science 1998, 282:2072-2075.
38. Uy G.D., et al. Inhibition of trophoblast stem cell potential in chorionic ectoderm coincides with occlusion of the ectoplacental cavity in the mouse. Development 2002, 129:3913-3924.
39. Warming S., et al. Simple and highly efficient BAC recombineering using galK selection. Nucleic Acids Res. 2005, 33:e36.