-
1
-
-
0015222647
-
The interpretation of protein structures: Estimation of static accessibility
-
Lee B, Richards FM, (1971) The interpretation of protein structures: Estimation of static accessibility. J Mol Biol 55: 379-400.
-
(1971)
J Mol Biol
, vol.55
, pp. 379-400
-
-
Lee, B.1
Richards, F.M.2
-
2
-
-
0023645203
-
Interior and surface of monomeric proteins
-
Miller S, Janin J, Lesk AM, Chothia C, (1987) Interior and surface of monomeric proteins. J Mol Biol 196: 641-656.
-
(1987)
J Mol Biol
, vol.196
, pp. 641-656
-
-
Miller, S.1
Janin, J.2
Lesk, A.M.3
Chothia, C.4
-
3
-
-
0023193446
-
The accessible surface area and stability of oligomeric proteins
-
Miller S, Lesk AM, Janin J, Chothia C, (1987) The accessible surface area and stability of oligomeric proteins. Nature 328: 834-836.
-
(1987)
Nature
, vol.328
, pp. 834-836
-
-
Miller, S.1
Lesk, A.M.2
Janin, J.3
Chothia, C.4
-
5
-
-
0030960311
-
Roughness of the globular protein surface: analysis of high resolution X-ray data
-
Timchenko AA, Galzitskaya OV, Serdyuk IN, (1997) Roughness of the globular protein surface: analysis of high resolution X-ray data. Proteins 28 (2): 194-201.
-
(1997)
Proteins
, vol.28
, Issue.2
, pp. 194-201
-
-
Timchenko, A.A.1
Galzitskaya, O.V.2
Serdyuk, I.N.3
-
6
-
-
0025346406
-
Surface fractality of proteins from theory and NMR data
-
Fushman D, (1990) Surface fractality of proteins from theory and NMR data. J Biomol Struct Dynam 7: 1333-1344.
-
(1990)
J Biomol Struct Dynam
, vol.7
, pp. 1333-1344
-
-
Fushman, D.1
-
7
-
-
0000305323
-
An analysis of the fractal properties of the surfaces of globular proteins
-
Fedorov BA, Fedorov BB, Schmidt PW, (1993) An analysis of the fractal properties of the surfaces of globular proteins. J Chem Phys 99: 4076-4083.
-
(1993)
J Chem Phys
, vol.99
, pp. 4076-4083
-
-
Fedorov, B.A.1
Fedorov, B.B.2
Schmidt, P.W.3
-
9
-
-
0011836746
-
Chemistry in noninteger dimensions between two and three. I. Fractal theory and heterogeneous surfaces
-
[Erratum: J. Chem. Phys. 80:4573, 1984]
-
Pfeifer P, Avnir D, (1983) Chemistry in noninteger dimensions between two and three. I. Fractal theory and heterogeneous surfaces. J Chem Phys 79: 3558-3565 [Erratum: J. Chem. Phys. 80:4573, 1984].
-
(1983)
J Chem Phys
, vol.79
, pp. 3558-3565
-
-
Pfeifer, P.1
Avnir, D.2
-
10
-
-
0016352763
-
Hydrophobic bonding and accessible surface-area in proteins
-
Chothia C, (1974) Hydrophobic bonding and accessible surface-area in proteins. Nature 248: 338-339.
-
(1974)
Nature
, vol.248
, pp. 338-339
-
-
Chothia, C.1
-
11
-
-
0035933058
-
Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water
-
Raschke TM, Tsai J, Levitt M, (2001) Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water. Proc Natl Acad Sci USA 98: 5965-5969.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 5965-5969
-
-
Raschke, T.M.1
Tsai, J.2
Levitt, M.3
-
12
-
-
68149142712
-
Coupling between Properties of the Protein Shape and the Rate of Protein Folding
-
Ivankov DN, Bogatyreva NS, Lobanov MY, Galzitskaya OV, (2009) Coupling between Properties of the Protein Shape and the Rate of Protein Folding. PLoS ONE 4 (8): e6476.
-
(2009)
PLoS ONE
, vol.4
, Issue.8
-
-
Ivankov, D.N.1
Bogatyreva, N.S.2
Lobanov, M.Y.3
Galzitskaya, O.V.4
-
13
-
-
60249102212
-
The relationship between protein accessible surface area and number of native contacts in its structure
-
Bogatyreva NS, Ivankov DN, (2008) The relationship between protein accessible surface area and number of native contacts in its structure. Mol Biol (Mosk) 42 (6): 1048-1055.
-
(2008)
Mol Biol (Mosk)
, vol.42
, Issue.6
, pp. 1048-1055
-
-
Bogatyreva, N.S.1
Ivankov, D.N.2
-
14
-
-
68649109782
-
Fractal protein structure revisited: topological kinetic and thermodynamic relationships
-
Tejera E, Machadoa A, Rebelo I, Nieto-Villar J, (2009) Fractal protein structure revisited: topological kinetic and thermodynamic relationships. Phys A 388: 4600-4608.
-
(2009)
Phys A
, vol.388
, pp. 4600-4608
-
-
Tejera, E.1
Machadoa, A.2
Rebelo, I.3
Nieto-Villar, J.4
-
15
-
-
62749124373
-
Residue network in protein native structure belongs to the universality class of three dimensional critical percolation cluster
-
Morita H, Takano M, (2009) Residue network in protein native structure belongs to the universality class of three dimensional critical percolation cluster. Phys Rev E 79: 020901.
-
(2009)
Phys Rev E
, vol.79
, pp. 020901
-
-
Morita, H.1
Takano, M.2
-
16
-
-
70449394017
-
Revisiting the myths of protein interior: studying proteins with mass-fractal hydrophobicityfractal and polarizability-fractal dimensions
-
Banerji A, Ghosh I, (2009) Revisiting the myths of protein interior: studying proteins with mass-fractal hydrophobicityfractal and polarizability-fractal dimensions. PLoS ONE 4 (10): e7361.
-
(2009)
PLoS ONE
, vol.4
, Issue.10
-
-
Banerji, A.1
Ghosh, I.2
-
17
-
-
0028961335
-
SCOP: a structural classification of proteins database for the investigation of sequences and structures
-
Murzin AG, Brenner SE, Hubbard T, Chothia C, (1995) SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 247 (4): 536-540.
-
(1995)
J Mol Biol
, vol.247
, Issue.4
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
18
-
-
66249103704
-
PDB_REDO: automated re-refinement of X-ray structure models in the PDB
-
Joosten RP, Salzemann J, Bloch V, Stockinger H, Berglund A, et al. (2009) PDB_REDO: automated re-refinement of X-ray structure models in the PDB. J Appl Crust 42: 376-384.
-
(2009)
J Appl Crust
, vol.42
, pp. 376-384
-
-
Joosten, R.P.1
Salzemann, J.2
Bloch, V.3
Stockinger, H.4
Berglund, A.5
-
19
-
-
0020997912
-
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W, Sander C, (1983) Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22 (12): 2577-2637.
-
(1983)
Biopolymers
, vol.22
, Issue.12
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
20
-
-
0026487174
-
Hydrogen bonding in globular proteins
-
Stickle DF, Presta LG, Dill KA, Rose GD, (1992) Hydrogen bonding in globular proteins. J Mol Biol 226 (4): 1143-1159.
-
(1992)
J Mol Biol
, vol.226
, Issue.4
, pp. 1143-1159
-
-
Stickle, D.F.1
Presta, L.G.2
Dill, K.A.3
Rose, G.D.4
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