A stochastic multi-scale model of electrical function in normal and depleted ICC networks

IEEE Transactions on Biomedical Engineering

Volumn 58, Issue 12 PART 2, 2011, Pages 3451-3455

  Gao, Jerry ^a   Du, Peng ^a   Archer, Rosalind ^b   O'Grady, Greg ^a   Gibbons, Simon J ^c   Farrugia, Gianrico ^c   Cheng, Leo K ^a   Pullan, Andrew J ^a,d,e  

^a UNIVERSITY OF AUCKLAND   (New Zealand)

^b UNIVERSITY OF AUCKLAND   (New Zealand)

^c MAYO CLINIC   (United States)

^d RIDDET INSTITUTE   (New Zealand)

^e VANDERBILT UNIVERSITY   (United States)

Author keywords

Gastroenterology; image generation; interstitial cells of Cajal (ICC); single normal equation simulation (SNESIM)

Indexed keywords

DEGREE OF CONNECTIVITY; EFFECTIVE TOOL; ELECTRICAL ACTIVITIES; IMAGE GENERATIONS; IMAGING DATA; INTERSTITIAL CELLS OF CAJAL; INTERSTITIAL CELLS OF CAJAL (ICC); MAXIMUM CURRENT DENSITY; MULTI-SCALE MODELING; MULTISCALE MODELS; NETWORK DENSITY; NORMAL EQUATIONS; SIMULATION TECHNIQUE; STRUCTURE-FUNCTION RELATIONSHIP; VIRTUAL IMAGES; WILD TYPES;

ALGORITHMS; GASTROENTEROLOGY; STOCHASTIC MODELS; TISSUE;

COMPUTER SIMULATION;

ALGORITHM; ARTICLE; COMPUTER MODEL; ELECTRIC ACTIVITY; INTERSTITIAL CELL OF CAJAL; INTERSTITIAL CELL OF CAJAL NETWORK; PERFORMANCE; SINGLE NORMAL EQUATION SIMULATION ALGORITHM; STOCHASTIC MODEL; STOCHASTIC MULTISCALE MODEL; VALIDATION PROCESS;

ALGORITHMS; ANIMALS; COMPUTER SIMULATION; DIAGNOSTIC TECHNIQUES, DIGESTIVE SYSTEM; ELECTRODIAGNOSIS; INTERSTITIAL CELLS OF CAJAL; MICE; MICE, KNOCKOUT; MODELS, BIOLOGICAL; RECEPTOR, SEROTONIN, 5-HT2B; REPRODUCIBILITY OF RESULTS;

EID: 82155199558     PISSN: 00189294     EISSN: 15582531     Source Type: Journal    
DOI: 10.1109/TBME.2011.2164248     Document Type: Article

References (15)

1. J. Huizinga, N. Zarate, and G. Farrugia, "Physiology, injury and recovery of interstitial cells of Cajal: basic and clinical science," Gastroenterology, vol. 137, pp. 1548-1556, 2009
2. G. Farrugia, "Interstitial cells of Cajal in health and disease," Neurogastroenterol. Motil., vol. 20, suppl 1, pp. 54-63, May 2008 (Pubitemid 351514538)
3. M. Grover, G. Farrugia, M. S. Lurken, C. E. Bernard, M. S. Faussone-Pellegrini, T. C. Smyrk, H. P. Parkman, T. L. Abell, W. J. Snape, W. L. Hasler, A. Unalp-Arida, L. Nguyen, K. L. Koch, J. Calles, L. Lee, J. Tonascia, F. A. Hamilton, and P. J. Pasricha, "Cellular changes in diabetic and idiopathic gastroparesis," Gastroenterology, vol. 140, no. 5, pp. 1575-1585, May 2011
4. Y. R. Wang, R. S. Fisher, and H. P. Parkman, "Gastroparesis-related hospitalizations in the United States: Trends, characteristics, and outcomes, 1995-2004," Amer. J. Gastroenterol., vol. 103, pp. 313-322, Feb. 2008 (Pubitemid 351248745)
5. C.He, L. Burgart, L.Wang, J. Pemberton, T.Young-Fadok, J. Szurszewski, and G. Farrugia, "Decreased interstitial cell of Cajal volume in patients with slow-transit constipation," Gastroenterology, vol. 118, no. 1, pp. 14-21, 2000 (Pubitemid 30020368)
6. P. Du, G. O'Grady, S. J. Gibbons, R. Yassi, R. Lees-Green, G. Farrugia, L. K. Cheng, and A. J. Pullan, "Tissue-specific mathematical models of slow wave entrainment in wild-type and 5-HT(2B) knockout mice with altered interstitial cells of Cajal networks," Biophys. J., vol. 98, pp. 1772-1781, May 2010
7. S. Strebelle, "Conditional simulation of complex geological structures using multiple-point statistics," Math. Geol., vol. 34, pp. 1-21, 2002 (Pubitemid 41444773)
8. S. Strebelle and A. Journel, "Reservoir modeling using multiple-point statistics," in Proc. SPE Annu. Tech. Conf. Exhib., Sep. 2001, pp. 1-11
9. V. S. Tharayil, M. M.Wouters, J. E. Stanich, J. L. Roeder, S. Lei, a. Beyder, P. J. Gomez-Pinilla, M. D. Gershon, L. Maroteaux, S. J. Gibbons, and G. Farrugia, "Lack of serotonin 5-HT2B receptor alters proliferation and network volume of interstitial cells of Cajal in vivo," Neurogastroenterol. Motil., vol. 22, pp. 462-469 and e109-e110, Apr. 2010
10. P. Du, G. O'Grady, J. Davidson, L. Cheng, and A. Pullan, "Multi-scale modeling of gastrointestinal electrophysiology and experimental validation," Crit. Rev. Biomed. Eng., vol. 38, pp. 1-30, 2010
11. A. Corrias and M. L. Buist, "Quantitative cellular description of gastric slow wave activity," Amer. J. Physiol. Gastrointest. Liver Physiol., vol. 294, pp. G989-G995, Apr. 2008 (Pubitemid 351520071)
12. C. M. Lloyd, M. D. B. Halstead, and P. F. Nielsen, "CellML: Its future, present and past," Prog. Biophys. Mol. Biol., vol. 85, pp. 433-450, 2004 (Pubitemid 38629921)
13. M. Stien, P. Abrahamsen, R. Hauge, and O. Kolbjørnsen, "Modification of the SNESIM algorithm," paper presented at Petroleum Geostatistics 2007, EAGE, Cascais, Portugal, Sep. 2007
14. X. Jie and N. Trayanova, "Mechanisms for initiation of reentry in acute regional ischemia phase 1b," Heart Rhythm, vol. 7, no. 3, pp. 379-386, 2010
15. R. Shaw and Y. Rudy, "Electrophysiologic effects of acute myocardial ischemia: A theoretical study of altered cell excitability and action potential duration," Cardiovasc. Res., vol. 35, no. 2, p. 256, 1997