메뉴 건너뛰기




Volumn 98, Issue 6, 2011, Pages 460-468

Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum

Author keywords

MiRNA targets; MiRNAs; Post transcriptional gene regulation; Sorghum

Indexed keywords

MICRORNA;

EID: 81955164851     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2011.08.005     Document Type: Article
Times cited : (61)

References (42)
  • 1
    • 33745271035 scopus 로고    scopus 로고
    • Functions of microRNAs and related small RNAs in plants
    • Mallory A.C., Vaucheret H. Functions of microRNAs and related small RNAs in plants. Nat. Genet. 2006, 38:S31-S36. Suppl.
    • (2006) Nat. Genet. , vol.38 , Issue.SUPPL.
    • Mallory, A.C.1    Vaucheret, H.2
  • 3
    • 78049275325 scopus 로고    scopus 로고
    • MicroRNAs with macro-effects on plant stress responses
    • Sunkar R. MicroRNAs with macro-effects on plant stress responses. Semin. Cell Dev. Biol. 2010, 21:805-811.
    • (2010) Semin. Cell Dev. Biol. , vol.21 , pp. 805-811
    • Sunkar, R.1
  • 4
    • 51749093103 scopus 로고    scopus 로고
    • Degradation of microRNAs by a family of exoribonucleases in Arabidopsis
    • Ramachandran V., Chen X. Degradation of microRNAs by a family of exoribonucleases in Arabidopsis. Science 2008, 321:1490-1492.
    • (2008) Science , vol.321 , pp. 1490-1492
    • Ramachandran, V.1    Chen, X.2
  • 7
    • 58849093262 scopus 로고    scopus 로고
    • Revisiting the principles of microRNA target recognition and mode of action
    • Brodersen P., Voinnet O. Revisiting the principles of microRNA target recognition and mode of action. Nat. Rev. Mol. Cell Biol. 2009, 10:141-148.
    • (2009) Nat. Rev. Mol. Cell Biol. , vol.10 , pp. 141-148
    • Brodersen, P.1    Voinnet, O.2
  • 8
    • 58449137410 scopus 로고    scopus 로고
    • The Sorghum bicolor genome and the diversification of grasses
    • Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., et al. The Sorghum bicolor genome and the diversification of grasses. Nature 2009, 457:551-556.
    • (2009) Nature , vol.457 , pp. 551-556
    • Paterson, A.H.1    Bowers, J.E.2    Bruggmann, R.3    Dubchak, I.4
  • 9
    • 59049107034 scopus 로고    scopus 로고
    • Plant genomics: Sorghum in sequence
    • Sasaki T., Antonio B.A. Plant genomics: Sorghum in sequence. Nature 2009, 457:547-548.
    • (2009) Nature , vol.457 , pp. 547-548
    • Sasaki, T.1    Antonio, B.A.2
  • 11
    • 54849436232 scopus 로고    scopus 로고
    • Applying genotyping (TILLING) and phenotyping analyses to elucidate gene function in a chemically induced sorghum mutant population
    • Xin Z., Wang M.L., Barkley N.A., Burow G., Franks C., Pederson G., Burke J. Applying genotyping (TILLING) and phenotyping analyses to elucidate gene function in a chemically induced sorghum mutant population. BMC Plant Biol. 2008, 8:103.
    • (2008) BMC Plant Biol. , vol.8 , pp. 103
    • Xin, Z.1    Wang, M.L.2    Barkley, N.A.3    Burow, G.4    Franks, C.5    Pederson, G.6    Burke, J.7
  • 13
    • 4043074968 scopus 로고    scopus 로고
    • Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
    • Sunkar R., Zhu J.K. Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell 2004, 16:2001-2019.
    • (2004) Plant Cell , vol.16 , pp. 2001-2019
    • Sunkar, R.1    Zhu, J.K.2
  • 14
    • 22144464033 scopus 로고    scopus 로고
    • Cloning and characterization of microRNAs from rice
    • Sunkar R., Girke T., Jain P.K., Zhu J.K. Cloning and characterization of microRNAs from rice. Plant Cell 2005, 17:1397-1411.
    • (2005) Plant Cell , vol.17 , pp. 1397-1411
    • Sunkar, R.1    Girke, T.2    Jain, P.K.3    Zhu, J.K.4
  • 15
    • 42149157716 scopus 로고    scopus 로고
    • Identification of novel and candidate miRNAs in rice by high throughput sequencing
    • Sunkar R., Zhou X., Zheng Y., Zhnag W., Zhu J.K. Identification of novel and candidate miRNAs in rice by high throughput sequencing. BMC Plant Biol. 2008, 8:25.
    • (2008) BMC Plant Biol. , vol.8 , pp. 25
    • Sunkar, R.1    Zhou, X.2    Zheng, Y.3    Zhnag, W.4    Zhu, J.K.5
  • 19
    • 34547668337 scopus 로고    scopus 로고
    • Common functions for diverse small RNAs of land plants
    • Axtell M.J., Snyder J.A., Bartel D.P. Common functions for diverse small RNAs of land plants. Plant Cell 2007, 19:1750-1769.
    • (2007) Plant Cell , vol.19 , pp. 1750-1769
    • Axtell, M.J.1    Snyder, J.A.2    Bartel, D.P.3
  • 21
    • 43149096961 scopus 로고    scopus 로고
    • In silico identification of conserved microRNAs in large number of diverse plant species
    • Sunkar R., Jagadeeswaran G. In silico identification of conserved microRNAs in large number of diverse plant species. BMC Plant Biol. 2008, 8:37.
    • (2008) BMC Plant Biol. , vol.8 , pp. 37
    • Sunkar, R.1    Jagadeeswaran, G.2
  • 23
    • 77953129094 scopus 로고    scopus 로고
    • Identification of microRNAs and their targets in switchgrass, a model biofuel plant species
    • Matts J., Jagadeeswaran G., Roe B.A., Sunkar R. Identification of microRNAs and their targets in switchgrass, a model biofuel plant species. J. Plant Physiol. 2010, 167:896-904.
    • (2010) J. Plant Physiol. , vol.167 , pp. 896-904
    • Matts, J.1    Jagadeeswaran, G.2    Roe, B.A.3    Sunkar, R.4
  • 25
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 2003, 31:3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 28
    • 27844526222 scopus 로고    scopus 로고
    • A miRNA involved in phosphate-starvation response in Arabidopsis
    • Fujii H., Chiou T.J., Lin S.I., Aung K., Zhu J.K. A miRNA involved in phosphate-starvation response in Arabidopsis. Curr. Biol. 2005, 15:2038-2043.
    • (2005) Curr. Biol. , vol.15 , pp. 2038-2043
    • Fujii, H.1    Chiou, T.J.2    Lin, S.I.3    Aung, K.4    Zhu, J.K.5
  • 29
    • 33745270651 scopus 로고    scopus 로고
    • Regulation of phosphate homeostasis by MicroRNA in Arabidopsis
    • Chiou T.J., Aung K., Lin S.I., Wu C.C., Chiang S.F., Su C.L. Regulation of phosphate homeostasis by MicroRNA in Arabidopsis. Plant Cell 2006, 18:412-421.
    • (2006) Plant Cell , vol.18 , pp. 412-421
    • Chiou, T.J.1    Aung, K.2    Lin, S.I.3    Wu, C.C.4    Chiang, S.F.5    Su, C.L.6
  • 30
    • 17444430392 scopus 로고    scopus 로고
    • MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
    • Allen E., Xie Z., Gustafson A.M., Carrington J.C. microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 2005, 121:207-221.
    • (2005) Cell , vol.121 , pp. 207-221
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Carrington, J.C.4
  • 31
    • 34347263491 scopus 로고    scopus 로고
    • Small RNAs as big players in plant abiotic stress responses and nutrient deprivation
    • Sunkar R., Chinnusamy R.V., Zhu J., Zhu J.K. Small RNAs as big players in plant abiotic stress responses and nutrient deprivation. Trends Plant Sci. 2007, 12:301-309.
    • (2007) Trends Plant Sci. , vol.12 , pp. 301-309
    • Sunkar, R.1    Chinnusamy, R.V.2    Zhu, J.3    Zhu, J.K.4
  • 33
    • 47049120791 scopus 로고    scopus 로고
    • MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis
    • Abdel-Ghany S.E., Pilon M. MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis. J. Biol. Chem. 2008, 283:15932-15945.
    • (2008) J. Biol. Chem. , vol.283 , pp. 15932-15945
    • Abdel-Ghany, S.E.1    Pilon, M.2
  • 34
    • 41849084853 scopus 로고    scopus 로고
    • Identification and characterization of small RNAs from the phloem of Brassica napus
    • Buhtz A., Springer F., Chappell L., Baulcombe D.C., Kehr J. Identification and characterization of small RNAs from the phloem of Brassica napus. Plant J. 2008, 53:739-749.
    • (2008) Plant J. , vol.53 , pp. 739-749
    • Buhtz, A.1    Springer, F.2    Chappell, L.3    Baulcombe, D.C.4    Kehr, J.5
  • 35
    • 1642366133 scopus 로고    scopus 로고
    • A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development
    • Chen X. A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development. Science 2004, 303:2022-2025.
    • (2004) Science , vol.303 , pp. 2022-2025
    • Chen, X.1
  • 38
    • 2942672580 scopus 로고    scopus 로고
    • Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
    • Jones-Rhoades M.W., Bartel D.P. Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol. Cell 2004, 14:787-799.
    • (2004) Mol. Cell , vol.14 , pp. 787-799
    • Jones-Rhoades, M.W.1    Bartel, D.P.2
  • 40
    • 0037144457 scopus 로고    scopus 로고
    • Cleavage of scarecrow-like mRNA targets directed by a class of Arabidopsis microRNA
    • Llave C., Xie Z., Kasschau K.D., Carrington J.C. Cleavage of scarecrow-like mRNA targets directed by a class of Arabidopsis microRNA. Science 2002, 297:2053-2056.
    • (2002) Science , vol.297 , pp. 2053-2056
    • Llave, C.1    Xie, Z.2    Kasschau, K.D.3    Carrington, J.C.4
  • 41
    • 33845688601 scopus 로고    scopus 로고
    • A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana
    • Rajagopalan R., Vaucheret H., Trejo J., Bartel D.P. A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. Genes Dev. 2006, 20:3407-3425.
    • (2006) Genes Dev. , vol.20 , pp. 3407-3425
    • Rajagopalan, R.1    Vaucheret, H.2    Trejo, J.3    Bartel, D.P.4
  • 42
    • 57749110646 scopus 로고    scopus 로고
    • The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance
    • Li W.X., Oono Y., Zhu J., He X.J., Wu J.M., Iida K., Lu X.Y., Cui X., Jin H., Zhu J.K. The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance. Plant Cell 2008, 20:2238-2251.
    • (2008) Plant Cell , vol.20 , pp. 2238-2251
    • Li, W.X.1    Oono, Y.2    Zhu, J.3    He, X.J.4    Wu, J.M.5    Iida, K.6    Lu, X.Y.7    Cui, X.8    Jin, H.9    Zhu, J.K.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.