Discriminating adenocarcinoma from normal colonic mucosa through deconvolution of Raman spectra

Journal of Biomedical Optics

Volumn 16, Issue 12, 2011, Pages

  Cambraia Lopes, Patricia ^a   Moreira, Joaquim Agostinho ^a   Almeida, Abilio ^a   Esteves, Artur ^a   Gregora, Ivan ^b   Ledinsky, Martin ^b   Lopes, Jose MacHado ^c   Henrique, Rui ^a,c   Oliveira, Albino ^d  

^a UNIVERSITY OF PORTO   (Portugal)

^b INSTITUTE OF PHYSICS   (Czech Republic)

^c PORTUGUESE ONCOLOGY INSTITUTE   (Portugal)

^d Pathological Anatomy Laboratory   (Portugal)

Author keywords

Biomedical optics; Data processing; Deconvolution; Raman spectroscopy

Indexed keywords

BAND INTENSITY; COLONIC MUCOSA; COLORECTAL CANCER; COMPARATIVE STUDIES; FITTING PROCEDURE; FORMALIN FIXATION; HUMAN COLON; INTENSITY RATIO; LINEAR DISCRIMINANT ANALYSIS; SPECTRAL DECONVOLUTION; SPECTRAL INFORMATION; SPECTRAL REGION; TISSUE TYPES;

DATA HANDLING; DATA PROCESSING; DECONVOLUTION; DISCRIMINANT ANALYSIS; FORMALDEHYDE; HISTOLOGY; NUCLEIC ACIDS; RAMAN SCATTERING; RAMAN SPECTROSCOPY; TISSUE;

SPECTRUM ANALYSIS;

ADENOCARCINOMA; ARTICLE; CHEMISTRY; COLON; COLORECTAL TUMOR; DISCRIMINANT ANALYSIS; FEASIBILITY STUDY; HUMAN; INTESTINE MUCOSA; METHODOLOGY; RAMAN SPECTROMETRY; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING;

ADENOCARCINOMA; COLON; COLORECTAL NEOPLASMS; DISCRIMINANT ANALYSIS; FEASIBILITY STUDIES; HUMANS; INTESTINAL MUCOSA; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING, COMPUTER-ASSISTED; SPECTRUM ANALYSIS, RAMAN;

EID: 81855180775     PISSN: 10833668     EISSN: 15602281     Source Type: Journal    
DOI: 10.1117/1.3658756     Document Type: Article

References (37)

1. Instituto Portugus de Oncologia do Porto, Registo Oncolgico 2008 (2009).
2. American Cancer Society, Cancer Statistics (2009).
3. American Cancer Society, Colorectal Cancer Facts Figures (2008-2010).
4. J. C. Taylor, C. A. Kendall, N. Stone, and T. A. Cook, Optical adjuncts for enhanced colonoscopic diagnosis., Br. J. Surg. 94 (1), 6-16 (2007). 10.1002/bjs.5628
5. C. L. Kay, D. Kulling, R. H. Hawes, J. W. Young, and P. B. Cotton, Virtual endoscopy-comparison with colonoscopy in the detection of space-occupying lesions of the colon.. Endoscopy 32 (3), 226-232 (2000). 10.1055/s-2000-100
6. R. S. Kwon, D. V. Sahani, and W. R. Brugge, Gastrointestinal cancer imaging: deeper than the eye can see., Gastroenterology 128 (6), 1538-1553 (2005). 10.1053/j.gastro.2005.03.034
7. T. Kawabata, T. Mizuno, S. Okazaki, M. Hiramatsu, T. Setoguchi, H. Kikuchi, M. Yamamoto, Y. Hiramatsu, K. Kondo, and M. Baba, Optical diagnosis of gastric cancer using near-infrared multichannel Raman spectroscopy with a 1064-nm excitation wavelength., J. Gastroenterol. 43 (4), 283-90 (2008). 10.1007/s00535-008-2160-2
8. H. Barr, T. Dix, and N. Stone, Optical spectroscopy for the early diagnosis of gastrointestinal malignancy., Lasers Med. Sci. 13 (1), 3-13 (1998). 10.1007/BF00592955
9. R. S. Dacosta, B. C. Wilson, and N. E. Marcon, New optical technologies for earlier endoscopic diagnosis of premalignant gastrointestinal lesions., J. Gastroenterol. Hepatol 17, S85-S104 (2002). 10.1046/j.1440-1746.17.s1.8.x
10. L. M. W. K. Song and B. C. Wilson, Endoscopic detection of early upper GI cancers., Best Practice Research Clinical Gastroenterology 19 (6), 833-856 (2005). 10.1016/j.bpg.2005.04.006
11. R. S. DaCosta, B. C. Wilson, and N. E. Marcon, Optical techniques for the endoscopic detection of dysplastic colonic lesions., Curr. Opin. Gastroenterol. 21, 70-79 (2004).
12. A. Dhar, K. S. Johnson, M. R. Novelli, S. G. Bown, I. J. Bigio, L. B. Lovat, and S. L. Bloom, Elastic scattering spectroscopy for the diagnosis of colonic lesions: initial results of a novel optical biopsy technique., Gastrointest. Endosc. 63 (2), 257-261 (2006). 10.1016/j.gie.2005.07.026
13. G. Reese, C. Reid, R. Goldin, M. A. Tran-Dang, A. Fitzgerald, P. Tekkis, and V. P. Wallace, Using terahertz pulsed imaging (TPI) to identify colonic pathology., in IEEE 33rd International Conference on Infrared, Millimeter and Terahertz Waves, IRMMW-THz 2008 (2008).
14. A. Molckovsky, L. M. W. K. Song, M. G. Shim, N. E. Marcon, and B. C. Wilson, Diagnostic potential of near-infrared Raman spectroscopy in the colon: Differentiating adenomatous from hyperplastic polyps., Gastrointest. Endosc. 57 (3), 396-402 (2003). 10.1067/mge.2003.105
15. B. Schrader, B. Dippel, I. Erb, S. Keller, T. Lochte, H. Schulz, E. Tatsch, S. Wessel, NIR Raman spectroscopy in medicine and biology: results and aspects., J. Mol. Struct. 480, 21-32 (1999). 10.1016/S0022-2860(98)00650-4
16. E. B. Hanlon, R. Manoharan, T. W. Koo, K. E. Shafer, J. T. Motz, M. Fitzmaurice, J. R. Kramer, I. Itzkan, R. R. Dasari, and M. S. Feld, Prospects for in vivo Raman spectroscopy.. Phys. Med. Biol. 45, R1-R59 (2000). 10.1088/0031-9155/45/2/201
17. W. Petrich, Mid-infrared and Raman spectroscopy for medical diagnostics., Appl. Spectrosc. Rev. 36 (2), 181-237 (2001). 10.1081/ASR-100106156
18. M. G. Shim, L. M. W. K. Song, N. E. Marcon, and B. C. Wilson, In vivo near-infrared Raman spectroscopy: demonstration of feasibility during clinical gastrointestinal endoscopy., Photochem. Photobiol. 72 (1), 146-50 (2000).
19. M. G. Shim and B. C. Wilson, Development of an in vivo Raman spectroscopic system for diagnostic applications., J. Raman Spectrosc. 28 (2-3), 131-42 (1997). 10.1002/(SICI)1097-4555(199702)28:2/3131::AID-JRS683.0.CO;2-S
20. N. Stone, C. Kendall, J. Smith, P. Crow, and H. Barr; Raman spectroscopy for identification of epithelial cancers., Faraday Discuss. 126, 141-157 (2004). 10.1039/b304992b
21. Z. Huang, W. Zheng, E. Widjaja, J. Mo, and C. Sheppard, Classification of colonic tissues using Raman spectroscopy and multivariate techniques., Proc. SPIE 6093, 60930Q (2006). 10.1117/12.647384
22. E. Widjaja, W. Zheng, and Z. Huang, Classification of colonic tissues using near-infrared Raman spectroscopy and support vector machines., Int. J. Oncol. 32 (3), 653-662 (2008).
23. M. V. P. Chowdary, K. K. Kumar, K. Thakur, A. Anand, J. Kurien, C. M. Krishna, and S. Mathew, Discrimination of normal and malignant mucosal tissues of the colon by Raman spectroscopy., Photomed. Laser Surg. 25 (4), 269-274 (2007). 10.1089/pho.2006.2066
24. N. Stone, C. Kendall, N. Shepherd, P. Crow, and H. Barr, Near-infrared Raman spectroscopy for the classification of epithelial pre-cancers and cancers., J. Raman Spectrosc. 33, 564-573 (2002). 10.1002/jrs.882
25. K. E. Shafer-Peltier, A. S. Haka, M. Fitzmaurice, J. Crowe, J. Myles, R. R. Dasari, and M. S. Feld, Raman microspectroscopic model of human breast tissue: implications for breast cancer diagnosis in vivo., J. Raman Spectrosc. 33 (7), 552-563 (2002). 10.1002/jrs.877
26. W. Hayes and R. Loudon, Scattering of Light by Crystals, John Wiley Sons, New York (1978).
27. A. Mahadevan-Jansen and R. R. Richards-Kortum, Raman spectroscopy for the detection of cancers and precancers., J. Biomed. Opt. 1 (1), 31-70 (1996). 10.1117/12.227815
28. C. Krafft, D. Codrich, G. Pelizzo, and V. Sergo, Raman and FTIR microscopic imaging of colon tissue: a comparative study., J. Biophotonics 1 (2), 154-169 (2008). 10.1002/jbio.200710005
29. D. Codrich, Applications and limits of Raman spectroscopy in the study of colonic and pulmonary malformations., PhD thesis, Universita' Degli Studi di Trieste (2007).
30. P. O. Andrade, R. A. Bitar, K. Yassoyama, H. Martinho, A. M. E. Santo, P. M. Bruno, and A. A. Martin, Study of normal colorectal tissue by FT-Raman spectroscopy., Anal. Bioanal. Chem. 387 (5), 1643-1648 (2007). 10.1007/s00216-006-0819-1
31. N. Lebrun, P. Dhamelincourt, C. Focsa, B. Chazallon, J. L. Destombes, and D. Prevost, Raman analysis of formaldehyde aqueous solutions as a function of concentration., J. Raman Spectrosc. 34 (6), 459-464 (2003). 10.1002/jrs.1025
32. Z. Huang, A. McWilliams, S. Lam, J. English, D. I. McLean, H. Lui, and H. Zeng, Effect of formalin fixation on the near-infrared Raman spectroscopy of normal and cancerous human bronchial tissues., Int. J. Oncol. 23 (3), 649-656 (2003).
33. M. G. N. Shim, Analysis of biological tissue with ex vivo and in vivo Raman spectroscopy., Masters thesis, University of Toronto (1996).
34. Z. Movasaghi, S. Rehman, and I. U. Rehman, Raman spectroscopy of biological tissues., Appl. Spectrosc. Rev. 42 (5), 493-541 (2007). 10.1080/05704920701551530
35. M. V. P. Chowdary, K. K. Kumar, S. Mathew, L. Rao, C. M. Krishna, and J. Kurien, Biochemical correlation of Raman spectra of normal, benign and malignant breast tissues: A spectral deconvolution study., Biopolymers 91 (7), 539-546 (2009). 10.1002/bip.21171
36. M. D. Keller, E. M. Kanter, and A. Mahadevan-Jansen, Raman spectroscopy for cancer diagnosis., Spectroscopy 21 (11), 33-41 (2006).
37. S. Kaminaka, T. Ito, H. Yamazaki, E. Kohda, and H. Hamaguchi, Near-infrared multichannel Raman spectroscopy toward real-time in vivo cancer diagnosis., J. Raman Spectrosc. 33 (7), 498-502 (2002). 10.1002/jrs.903