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Volumn 184, Issue 10, 2011, Pages 1153-1163

Sarcoidosis blood transcriptome reflects lung inflammation and overlaps with tuberculosis

Author keywords

Algorithms; Computational biology; Gene expression profiling; Interferons

Indexed keywords

AZATHIOPRINE; CORTICOSTEROID; HYDROXYCHLOROQUINE; METHOTREXATE; MYCOPHENOLIC ACID; PREDNISONE; TRANSCRIPTOME; TUMOR NECROSIS FACTOR ALPHA INHIBITOR;

EID: 81455150139     PISSN: 1073449X     EISSN: 15354970     Source Type: Journal    
DOI: 10.1164/rccm.201106-1143OC     Document Type: Article
Times cited : (136)

References (48)
  • 2
    • 0014020539 scopus 로고
    • Immunology of sarcoidosis
    • James DG. Immunology of sarcoidosis. Lancet 1966;2:633-635.
    • (1966) Lancet , vol.2 , pp. 633-635
    • James, D.G.1
  • 3
    • 0000008129 scopus 로고
    • Altered immunologic reactions in sarcoidosis
    • Sones M, Israel HL. Altered immunologic reactions in sarcoidosis. Ann Intern Med 1954;40:260-268.
    • (1954) Ann Intern Med , vol.40 , pp. 260-268
    • Sones, M.1    Israel, H.L.2
  • 4
    • 0023141523 scopus 로고
    • Lack of immune deficiency in sarcoidosis: Compartmentalisation of the immune response
    • Hudspith BN, Flint KC, Geraint-James D, Brostoff J, Johnson NM. Lack of immune deficiency in sarcoidosis: compartmentalisation of the immune response. Thorax 1987;42:250-255. (Pubitemid 17058937)
    • (1987) Thorax , vol.42 , Issue.4 , pp. 250-255
    • Hudspith, B.N.1    Flint, K.C.2    Geraint-James, D.3
  • 5
    • 0343482917 scopus 로고
    • In-vitro studies of lymphocytes from patients with sarcoidosis and lymphoproliferative diseases
    • Hirschhorn K, Schreibman RR, Bach FH, Siltzbach LE. In-vitro studies of lymphocytes from patients with sarcoidosis and lymphoproliferative diseases. Lancet 1964;2:842-843.
    • (1964) Lancet , vol.2 , pp. 842-843
    • Hirschhorn, K.1    Schreibman, R.R.2    Bach, F.H.3    Siltzbach, L.E.4
  • 6
    • 0015093272 scopus 로고
    • A correlation of in vivo delayed-type hypersensitivity with in vitro lymphocyte transformation in sarccidosis
    • Sharma OP, James DG, Fox RA. A correlation of in vivo delayed-type hypersensitivity with in vitro lymphocyte transformation in sarccidosis. Chest 1971;60:35-37.
    • (1971) Chest , vol.60 , pp. 35-37
    • Sharma, O.P.1    James, D.G.2    Fox, R.A.3
  • 7
    • 0015895367 scopus 로고
    • In vitro observations on sarcoid lymphocytes and their correlation with cutaneous energy and clinical severity of disease
    • Kataria YP, Sagone AL, LoBuglio AG, Bromberg PA. In vitro observations on sarcoid lymphocytes and their correlation with cutaneous energy and clinical severity of disease. Am Rev Respir Dis 1973;108:767-776.
    • (1973) Am Rev Respir Dis , vol.108 , pp. 767-776
    • Kataria, Y.P.1    Sagone, A.L.2    LoBuglio, A.G.3    Bromberg, P.A.4
  • 8
    • 0021885782 scopus 로고
    • Gamma interferon is spontaneously released by alveolar macrophages and lung T lymphocytes in patients with pulmonary sarcoidosis
    • Robinson BW, McLemore TL, Crystal RG. Gamma interferon is spontaneously released by alveolar macrophages and lung T lymphocytes in patients with pulmonary sarcoidosis. J Clin Invest 1985;75:1488-1495. (Pubitemid 15041440)
    • (1985) Journal of Clinical Investigation , vol.75 , Issue.5 , pp. 1488-1495
    • Robinson, B.W.S.1    McLemore, T.L.2    Crystal, R.G.3
  • 10
    • 0022971158 scopus 로고
    • Compartmentalized activation of the interleukin 2 gene by lung T lymphocytes in active pulmonary sarcoidosis
    • Muller-Quernheim J, Saltini C, Sondermeyer P, Crystal RG. Compartmentalized activation of the interleukin 2 gene by lung T lymphocytes in active pulmonary sarcoidosis. J Immunol 1986;137:3475-3483. (Pubitemid 17193303)
    • (1986) Journal of Immunology , vol.137 , Issue.11 , pp. 3475-3483
    • Muller-Quernheim, J.1    Saltini, C.2    Sondermeyer, P.3    Crystal, R.G.4
  • 11
    • 0019378330 scopus 로고
    • Pulmonary sarcoidosis: A disease characterized and perpetuated by activated lung T-lymphocytes
    • Crystal RG, Roberts WC, Hunninghake GW, Gadek JE, Fulmer JD, Line BR. Pulmonary sarcoidosis: a disease characterized and perpetuated by activated lung T-lymphocytes. Ann Intern Med 1981;94:73-94. (Pubitemid 11218737)
    • (1981) Annals of Internal Medicine , vol.94 , Issue.1 , pp. 73-94
    • Crystal, R.G.1    Roberts, W.D.2    Hunninghake, G.W.3
  • 12
    • 0018829487 scopus 로고
    • Maintenance of granuloma formation in pulmonary sarcoidosis by T lymphocytes within the lung
    • Hunninghake GW, Gadek JE, Young RC Jr, Kawanami O, Ferrans VJ, Crystal RG. Maintenance of granuloma formation in pulmonary sarcoidosis by T lymphocytes within the lung. N Engl J Med 1980;302:594-598. (Pubitemid 10073407)
    • (1980) New England Journal of Medicine , vol.302 , Issue.11 , pp. 594-598
    • Hunninghake, G.W.1    Gadek, J.E.2    Young Jr., R.C.3
  • 13
    • 0019510394 scopus 로고
    • Pulmonary sarcoidosis. A disorder mediated by excess helper T-lymphocyte activity at sites of disease activity
    • Hunninghake GW, Crystal RG. Pulmonary sarcoidosis: a disorder mediated by excess helper T-lymphocyte activity at sites of disease activity. N Engl J Med 1981;305:429-434. (Pubitemid 11047044)
    • (1981) New England Journal of Medicine , vol.305 , Issue.8 , pp. 429-434
    • Hunninghake, G.W.1    Crystal, R.G.2
  • 15
    • 0021981441 scopus 로고
    • Ia-like antigens on T-cells and their subpopulations in pulmonary sarcoidosis and in hypersensitivity pneumonitis. Analysis of bronchoalveolar and blood lymphocytes
    • Costabel U, Bross KJ, Ruhle KH, Lohr GW, Matthys H. Ia-like antigens on T-cells and their subpopulations in pulmonary sarcoidosis and in hypersensitivity pneumonitis: analysis of bronchoalveolar and blood lymphocytes. Am Rev Respir Dis 1985;131:337-342. (Pubitemid 15133589)
    • (1985) American Review of Respiratory Disease , vol.131 , Issue.3 , pp. 337-342
    • Costabel, U.1    Bross, K.J.2    Ruhle, K.H.3
  • 16
    • 0022510623 scopus 로고
    • Spontaneous release of interleukin 2 by lung T lymphocytes in active pulmonary sarcoidosis is primarily from the Leu3+DR+ T cell subset
    • Saltini C, Spurzem JR, Lee JJ, Pinkston P, Crystal RG. Spontaneous release of interleukin 2 by lung T lymphocytes in active pulmonary sarcoidosis is primarily from the leu3+dr+ T cell subset. J Clin Invest 1986;77:1962-1970. (Pubitemid 16062653)
    • (1986) Journal of Clinical Investigation , vol.77 , Issue.6 , pp. 1962-1970
    • Saltini, C.1    Spurzem, J.R.2    Lee, J.J.3
  • 17
    • 0022607551 scopus 로고
    • Helper T-lymphocytes in pulmonary sarcoidosis. Functional analysis of a lung T-cell subpopulation in patients with active disease
    • Rossi GA, Sacco O, Cosulich E, Risso A, Balbi B, Ravazzoni C. Helper T-lymphocytes in pulmonary sarcoidosis: functional analysis of a lung T-cell subpopulation in patients with active disease. Am Rev Respir Dis 1986;133:1086-1090. (Pubitemid 16090017)
    • (1986) American Review of Respiratory Disease , vol.133 , Issue.6 , pp. 1086-1090
    • Rossi, G.A.1    Sacco, O.2    Cosulich, E.3
  • 18
    • 0023959792 scopus 로고
    • T lymphocytes compartmentalized on the epithelial surface of the lower respiratory tract express the very late activation antigen complex vla-1
    • Saltini C, Hemler ME, Crystal RG. T lymphocytes compartmentalized on the epithelial surface of the lower respiratory tract express the very late activation antigen complex vla-1. Clin Immunol Immunopathol 1988;46:221-233.
    • (1988) Clin Immunol Immunopathol , vol.46 , pp. 221-233
    • Saltini, C.1    Hemler, M.E.2    Crystal, R.G.3
  • 19
    • 0020541599 scopus 로고
    • Spontaneous release of interleukin-2 by lung T lymphocytes in active pulmonary sarcoidosis
    • Pinkston P, Bitterman PB, Crystal RG. Spontaneous release of interleukin-2 by lung T lymphocytes in active pulmonary sarcoidosis. N Engl J Med 1983;308:793-800. (Pubitemid 13114673)
    • (1983) New England Journal of Medicine , vol.308 , Issue.14 , pp. 793-800
    • Pinkston, P.1    Bitterman, P.B.2    Crystal, R.G.3
  • 20
    • 0020528766 scopus 로고
    • Role of interleukin-2 release by lung T-cells in active pulmonary sarcoidosis
    • Hunninghake GW, Bedell GN, Zavala DC, Monick M, Brady M. Role of interleukin-2 release by lung T-cells in active pulmonary sarcoidosis. Am Rev Respir Dis 1983;128:634-638. (Pubitemid 13014111)
    • (1983) American Review of Respiratory Disease , vol.128 , Issue.4 , pp. 634-638
    • Hunninghake, G.W.1    Bedell, G.N.2    Zavala, D.C.3
  • 21
    • 0019498140 scopus 로고
    • Mechanisms of hypergammaglobulinemia in pulmonary sarcoidosis. Site of increased antibody production and role of T lymphocytes
    • Hunninghake GW, Crystal RG. Mechanisms of hypergammaglobulinemia in pulmonary sarcoidosis: site of increased antibody production and role of T lymphocytes. J Clin Invest 1981;67:86-92. (Pubitemid 11163160)
    • (1981) Journal of Clinical Investigation , vol.67 , Issue.1 , pp. 86-92
    • Hunninghake, G.W.1    Crystal, R.G.2
  • 23
    • 44649180530 scopus 로고    scopus 로고
    • Etiology of Sarcoidosis
    • DOI 10.1016/j.ccm.2008.03.011, PII S0272523108000324
    • Chen ES, Moller DR. Etiology of sarcoidosis. Clin Chest Med 2008;29:365-377 (vii). (Pubitemid 351778206)
    • (2008) Clinics in Chest Medicine , vol.29 , Issue.3 , pp. 365-377
    • Chen, E.S.1    Moller, D.R.2
  • 26
    • 38449083335 scopus 로고    scopus 로고
    • Molecular evidence for the role of mycobacteria in sarcoidosis: A meta-analysis
    • DOI 10.1183/09031936.00002607
    • Gupta D, Agarwal R, Aggarwal AN, Jindal SK. Molecular evidence for the role of mycobacteria in sarcoidosis: a meta-analysis. Eur Respir J 2007;30:508-516. (Pubitemid 351182075)
    • (2007) European Respiratory Journal , vol.30 , Issue.3 , pp. 508-516
    • Gupta, D.1    Agarwal, R.2    Aggarwal, A.N.3    Jindal, S.K.4
  • 27
    • 0344702290 scopus 로고    scopus 로고
    • Mycobacterial DNA in recurrent sarcoidosis in the transplanted lung - A PCR-based study on four cases
    • Klemen H, Husain AN, Cagle PT, Garrity ER, Popper HH. Mycobacterial DNA in recurrent sarcoidosis in the transplanted lung: a PCR-based study on four cases. Virchows Arch 2000;436:365-369. (Pubitemid 30219235)
    • (2000) Virchows Archiv , vol.436 , Issue.4 , pp. 365-369
    • Klemen, H.1    Husain, A.N.2    Cagle, P.T.3    Garrity, E.R.4    Popper, H.H.5
  • 31
    • 0033172779 scopus 로고    scopus 로고
    • Statement on sarcoidosis. Joint statement of the American Thoracic Society (ATS), the European Respiratory Society (Ers) and the World Association of Sarcoidosis and other Granulomatous Disorders (WASOG) adopted by the ATS Board of Directors and by the ERS Executive Committee, February 1999
    • Statement on sarcoidosis. Joint statement of the American Thoracic Society (ATS), the European Respiratory Society (Ers) and the World Association of Sarcoidosis and other Granulomatous Disorders (WASOG) adopted by the ATS Board of Directors and by the ERS Executive Committee, February 1999. Am J Respir Crit Care Med 1999;160:736-755.
    • (1999) Am J Respir Crit Care Med , vol.160 , pp. 736-755
  • 33
    • 0015545824 scopus 로고
    • Clinical interpretation of bilateral hilar adenopathy
    • Winterbauer RH, Belic N, Moores KD. Clinical interpretation of bilateral hilar adenopathy. Ann Intern Med 1973;78:65-71.
    • (1973) Ann Intern Med , vol.78 , pp. 65-71
    • Winterbauer, R.H.1    Belic, N.2    Moores, K.D.3
  • 37
    • 30644464444 scopus 로고    scopus 로고
    • Gene selection and classification of microarray data using random forest
    • Diaz-Uriarte R, Alvarez de Andres S. Gene selection and classification of microarray data using random forest. BMC Bioinformatics 2006;7:3.
    • (2006) BMC Bioinformatics , vol.7 , pp. 3
    • Diaz-Uriarte, R.1    Alvarez De Andres, S.2
  • 38
    • 16244401458 scopus 로고    scopus 로고
    • Regularization and variable selection via the elastic net
    • Zou H, Hastie T. Regularization and variable selection via the elastic net. J R Stat Soc, B 2005;67:310-320.
    • (2005) J R Stat Soc, B , vol.67 , pp. 310-320
    • Zou, H.1    Hastie, T.2
  • 39
    • 27944493276 scopus 로고    scopus 로고
    • Classification of microarrays to nearest centroids
    • DOI 10.1093/bioinformatics/bti681
    • Dabney AR. Classification of microarrays to nearest centroids. Bioinformatics 2005;21:4148-4154. (Pubitemid 41672105)
    • (2005) Bioinformatics , vol.21 , Issue.22 , pp. 4148-4154
    • Dabney, A.R.1
  • 40
    • 0345040873 scopus 로고    scopus 로고
    • Classification and regression by randomforest
    • Liaw A, Wiener M. Classification and regression by randomforest. R News 2002;2:18-22.
    • (2002) R News , vol.2 , pp. 18-22
    • Liaw, A.1    Wiener, M.2
  • 42
    • 0034828233 scopus 로고    scopus 로고
    • - contransporter (NKCC1) in asthmatic subjects
    • DOI 10.1101/gr.191301
    • Dolganov GM, Woodruff PG, Novikov AA, Zhang Y, Ferrando RE, Szubin R, Fahy JV. A novel method of gene transcript profiling in airway biopsy homogenates reveals increased expression of a Na+-K+-Cl- cotransporter (nkcc1) in asthmatic subjects. Genome Res 2001;11:1473-1483. (Pubitemid 32894673)
    • (2001) Genome Research , vol.11 , Issue.9 , pp. 1473-1483
    • Dolganov, G.M.1    Woodruff, P.G.2    Novikov, A.A.3    Zhang, Y.4    Ferrando, R.E.5    Szubin, R.6    Fahy, J.V.7
  • 44
    • 0001677717 scopus 로고    scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Ser A Stat Soc 2005;57:289-300.
    • (2005) J R Stat Soc Ser A Stat Soc , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 46
    • 0023805925 scopus 로고
    • Spontaneous expression of the interleukin 2 receptor gene and presence of functional interleukin 2 receptors on T lymphocytes in the blood of individuals with active pulmonary sarcoidosis
    • Konishi K, Moller DR, Saltini C, Kirby M, Crystal RG. Spontaneous expression of the interleukin 2 receptor gene and presence of functional interleukin 2 receptors on T lymphocytes in the blood of individuals with active pulmonary sarcoidosis. J Clin Invest 1988;82:775-781.
    • (1988) J Clin Invest , vol.82 , pp. 775-781
    • Konishi, K.1    Moller, D.R.2    Saltini, C.3    Kirby, M.4    Crystal, R.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.