A hierarchical bayesian approach to ecological count data: A flexible tool for ecologists

PLoS ONE

Volumn 6, Issue 11, 2011, Pages

  Fordyce, James A ^a   Gompert, Zachariah ^b   Forister, Matthew L ^c   Nice, Chris C ^d  

^a UNIVERSITY OF TENNESSEE   (United States)

^b UNIVERSITY OF WYOMING   (United States)

^c UNIVERSITY OF NEVADA   (United States)

^d TEXAS STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYSIS OF VARIANCE; ANALYTICAL PARAMETERS; ARTICLE; BAYES THEOREM; BUTTERFLY; CONTROLLED STUDY; ECOLOGY; EGG LAYING; FEMALE; INFORMATION PROCESSING; LYCAEIDES; NONHUMAN; PLANT INSECT INTERACTION; POPULATION DYNAMICS; SPECIES DIFFERENTIATION; STATISTICAL ANALYSIS; ANIMAL; COMPUTER SIMULATION; DECISION MAKING; HOST PARASITE INTERACTION; METHODOLOGY; PHYSIOLOGY; STATISTICAL MODEL;

LYCAEIDES; PAPILIONOIDEA;

ANIMALS; BAYES THEOREM; BUTTERFLIES; CHOICE BEHAVIOR; COMPUTER SIMULATION; ECOLOGY; FEMALE; HOST-PARASITE INTERACTIONS; MODELS, STATISTICAL; POPULATION DYNAMICS;

EID: 81455144573     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0026785     Document Type: Article

References (27)

1. Fordyce J, Nice C, Forister M, Shapiro A, (2002) The significance of wing pattern diversity in the Lycaenidae: mate discrimination by two recently diverged species. Journal of Evolutionary Biology 15: 871-879.
2. Pruitt JR, Reichert SE, Jones TC, (2008) Behavioral syndromes and their fitness consequences in a socially polymorphic spider, Anelosimus studiosus. Animal Behaviour 76: 871-879.
3. Nice C, Fordyce J, Shapiro A, Ffrench-Constant R, (2002) Lack of evidence for reproductive isolation among ecologically specialised lycaenid butterflies. Ecological Entomology 27: 702-712.
4. Scopece G, Widmer A, Cozzolino S, (2008) Evolution of postzygotic reproductive isolation in a guild of deceptive orchids. Am Nat 171: 315-26.
5. Salkeld DJ, Trivedi M, Schwarzkopf L, (2008) Parasite loads are higher in the tropics: temperate to tropical variation in a single host-parasite system. Ecography 31: 538-544.
6. Forister ML, Nice CC, Fordyce JA, Gompert Z, (2009) Host range evolution is not driven by the optimization of larval performance: the case of Lycaeides melissa (Lepidoptera: Lycaenidae) and the colonization of alfalfa. Oecologia 160: 551-561.
7. Fordyce JA, (2001) The lethal plant defense paradox remains: indicible host-plant aristolochic acids and the growth and defense of the pipevine swallowtail. Entomologia Experimentalis et Applicata 100: 339-346.
8. Hollander M, Wolfe DA, (1999) Nonparametric statistical methods Wiley, 2nd edition.
9. Gravetter FJ, Wallnau LB, (2009) Statistics for the behavioral sciences Wadsworth Cengage Learning.
10. Conover WJ, (1999) Practical nonparametric statistics John Wiley and Sons, Inc., 3rd edition.
11. Quinn GP, Keough MJ, (2009) Experimental design and data analysis for biologists Cambridge University Press.
12. Warton DI, Hui FKC, (2011) The arcsine is asinine: the analysis of proportions in ecology. Ecology 92: 3-10.
13. Spiegelhalter DJ, Best NG, Carlin BP, Linde A, (2002) Bayesian measures of model complexity and fit. Journal of the Royal Statistical Society Series B 64: 583-639.
14. Burnham KP, Anderson DR, (2002) Model selection and multimodel inference New York Springer-Verlag, 2nd edition.
15. Forister ML, Gompert Z, Fordyce JA, Nice CC, (2010) After 60 years, an answer to the question: what is the karner blue butterfly? Biology Letters 7: 399-402.
16. Gompert Z, Fordyce JA, Forister ML, Shapiro AM, Nice CC, (2006) Homoploid hybrid speciation in an extreme habitat. Science 314: 1923-1925.
17. Fordyce J, Nice C, (2003) Variation in butterfly egg adhesion: adaptation to local host plant senescence characteristics? Ecology Letters 6: 23-27.
18. Gompert Z, Nice C, Fordyce J, Forister M, Shapiro A, (2006) Identifying units for conservation using molecular systematics: the cautionary tale of the Karner blue butterfly. Molecular ecology 15: 1759-1768.
19. Forister ML, Fordyce JA, Nice CC, Gompert Z, Shapiro AM, (2006) Egg morphology varies among populations and habitats along a suture zone in the Lycaeides idas-melissa species complex (Lepidoptera: Lycaenidae). Annals of the Entomological Society of America 99: 933-937.
20. Lucas LK, Fordyce JA, Nice CC, (2008) Patterns of genitalic morphology around suture zones in North American Lycaeides (Lepidoptera: Lycaenidae): Implications for taxonomy and historical biogeography. Annals of the Entomological Society of America 101: 172-180.
21. Gompert Z, Forister ML, Fordyce JA, Nice CC, (2008) Widespread mito-nuclear discordance with evidence for introgressive hybridization and selective sweeps in Lycaeides. Molecular ecology 17: 5231-5244.
22. Nice CC, Gompert Z, Forister ML, Fordyce JA, (2009) An unseen foe in arthropod conservation efforts: The case of Wolbachia infections in the Karner blue butterfly. Biological Conservation 142: 3137-3146.
23. Gompert Z, Fordyce JA, Forister ML, Nice CC, (2008) Recent colonization and radiation of North American Lycaeides (Plebejus) inferred from mtDNA. Molecular phylogenetics and evolution 48: 481-490.
24. Gompert Z, Lucas LK, Fordyce JA, Forister ML, Nice CC, (2010) Secondary contact between Lycaeides idas and L-melissa in the Rocky Mountains: extensive admixture and a patchy hybrid zone. Molecular ecology 19: 3171-3192.
25. Gompert Z, Forister ML, Fordyce JA, Nice CC, Williamson RJ, et al. (2010) Bayesian analysis of molecular variance in pyrosequences quantifies population genetic structure across the genome of Lycaeides butterflies. Molecular ecology 19: 2455-2473.
26. Feder JL, (1998) The apple maggot fly, Rhagoletis pomonella: flies in the face of conventional wisdom about speciation? In: Howard DJ, Berlocher SH, editors. Endless Forms New York Oxford University Press pp. 130-144.
27. R Development Core Team (2011) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.