-
1
-
-
70349492669
-
Assessing the diversity of bacterial communities associated with plants
-
Andreote FD, Azevedo JL, Araújo WL (2009) Assessing the diversity of bacterial communities associated with plants. Braz J Microbiol 40: 417-432.
-
(2009)
Braz J Microbiol
, vol.40
, pp. 417-432
-
-
Andreote, F.D.1
Azevedo, J.L.2
Araújo, W.L.3
-
2
-
-
42049122119
-
Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California
-
Beman JM, Popp BN, Francis CA (2008) Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California. ISME J 2: 429-441.
-
(2008)
ISME J
, vol.2
, pp. 429-441
-
-
Beman, J.M.1
Popp, B.N.2
Francis, C.A.3
-
3
-
-
76649087327
-
Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates
-
Bernhard AE, Landry ZC, Blevins A, de la Torre JS, Giblin AE, Stahl DA (2010) Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates. Appl Environ Microbiol 76: 1285-1289.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 1285-1289
-
-
Bernhard, A.E.1
Landry, Z.C.2
Blevins, A.3
de la Torre, J.S.4
Giblin, A.E.5
Stahl, D.A.6
-
4
-
-
35948999268
-
Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia
-
Caffrey JM, Bano N, Kalanetra K, Hollibaugh JT (2007) Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia. ISME J 1: 660-662.
-
(2007)
ISME J
, vol.1
, pp. 660-662
-
-
Caffrey, J.M.1
Bano, N.2
Kalanetra, K.3
Hollibaugh, J.T.4
-
5
-
-
78149409938
-
The bacterial diversity in a Brazilian non-disturbed mangrove sediment
-
Dias ACF, Andreote FD, Rigonato J, Fiore MF, Melo IS, Araújo WL (2010) The bacterial diversity in a Brazilian non-disturbed mangrove sediment. Antonie van Leeuwenhoek 98: 541-551.
-
(2010)
Antonie Van Leeuwenhoek
, vol.98
, pp. 541-551
-
-
Dias, A.C.F.1
Andreote, F.D.2
Rigonato, J.3
Fiore, M.F.4
Melo, I.S.5
Araújo, W.L.6
-
6
-
-
68149112220
-
Environmental factors shaping the ecological niches of ammonia oxidizing archaea
-
Erguder TH, Boon N, Wittebolle L, Marzorati M, Verstraete W (2009) Environmental factors shaping the ecological niches of ammonia oxidizing archaea. FEMS Microbiol Rev 33: 855-869.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 855-869
-
-
Erguder, T.H.1
Boon, N.2
Wittebolle, L.3
Marzorati, M.4
Verstraete, W.5
-
7
-
-
77955924294
-
Spatial patterns of soil attributes and components in a mangrove system in Southeast Brazil (São Paulo)
-
Ferreira TO, Otero XL, Souza VS Jr, Vidal-Torrado P, Macías F, Firme LP (2010) Spatial patterns of soil attributes and components in a mangrove system in Southeast Brazil (São Paulo). J Soil Sediment 10: 995-1006.
-
(2010)
J Soil Sediment
, vol.10
, pp. 995-1006
-
-
Ferreira, T.O.1
Otero, X.L.2
Souza Jr., V.S.3
Vidal-Torrado, P.4
Macías, F.5
Firme, L.P.6
-
8
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102: 14683-14688.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
9
-
-
34248178641
-
New processes and players in the nitrogen cycle: the microbial ecology of anaerobic and archaeal ammonia oxidation
-
Francis CA, Beman JM, Kuypers MMM (2007) New processes and players in the nitrogen cycle: the microbial ecology of anaerobic and archaeal ammonia oxidation. ISME J 1: 19-27.
-
(2007)
ISME J
, vol.1
, pp. 19-27
-
-
Francis, C.A.1
Beman, J.M.2
Kuypers, M.M.M.3
-
10
-
-
0026525546
-
Novel major archaebacterial group from marine plankton
-
Fuhrman JA, McCallum K, Davis AA (1992) Novel major archaebacterial group from marine plankton. Nature 356: 148-149.
-
(1992)
Nature
, vol.356
, pp. 148-149
-
-
Fuhrman, J.A.1
McCallum, K.2
Davis, A.A.3
-
11
-
-
78149396555
-
Dynamics of ammonia-oxidizing communities in barley-planted bulk soil and rhizosphere following nitrate and ammonium fertilizer amendment
-
Glaser K, Hack E, Inselsbacher E, Strauss J, Wanek W, Zechmeister-Boltenstern S, Sessitsch A (2010) Dynamics of ammonia-oxidizing communities in barley-planted bulk soil and rhizosphere following nitrate and ammonium fertilizer amendment. FEMS Microbiol Ecol 74: 575-591.
-
(2010)
FEMS Microbiol Ecol
, vol.74
, pp. 575-591
-
-
Glaser, K.1
Hack, E.2
Inselsbacher, E.3
Strauss, J.4
Wanek, W.5
Zechmeister-Boltenstern, S.6
Sessitsch, A.7
-
12
-
-
51649087221
-
Exploring the diversity of bacterial communities in sediments of urban mangrove forests
-
Gomes NCM, Borges LR, Paranhos R, Pinto FN, Mendonça-Hagler LCS, Smalla K (2008) Exploring the diversity of bacterial communities in sediments of urban mangrove forests. FEMS Microbiol Ecol 66: 96-109.
-
(2008)
FEMS Microbiol Ecol
, vol.66
, pp. 96-109
-
-
Gomes, N.C.M.1
Borges, L.R.2
Paranhos, R.3
Pinto, F.N.4
Mendonça-Hagler, L.C.S.5
Smalla, K.6
-
13
-
-
0035037353
-
The role of sediment microorganisms in the productivity, conservation, and rehabilitation of the mangrove ecosystems: an overview
-
Holguin G, Vazquez P, Bashan Y (2001) The role of sediment microorganisms in the productivity, conservation, and rehabilitation of the mangrove ecosystems: an overview. Biol Fertil Soils 33: 265-278.
-
(2001)
Biol Fertil Soils
, vol.33
, pp. 265-278
-
-
Holguin, G.1
Vazquez, P.2
Bashan, Y.3
-
14
-
-
0035945618
-
Archaeal dominance in the mesopelagic zone of the Pacific Ocean
-
Karner MB, DeLong EF, Karl DM (2001) Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Nature 409: 507-510.
-
(2001)
Nature
, vol.409
, pp. 507-510
-
-
Karner, M.B.1
Delong, E.F.2
Karl, D.M.3
-
15
-
-
16644376320
-
Biology of mangroves and mangrove ecosystem
-
Kathiresan K, Bingham BL (2001) Biology of mangroves and mangrove ecosystem. Adv Mar Biol 40: 81-251.
-
(2001)
Adv Mar Biol
, vol.40
, pp. 81-251
-
-
Kathiresan, K.1
Bingham, B.L.2
-
16
-
-
79952532923
-
Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments
-
Li M, Cao H, Hong Y, Gu JD (2010) Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments. Appl Microbiol Biotechnol 89: 1243-1254.
-
(2010)
Appl Microbiol Biotechnol
, vol.89
, pp. 1243-1254
-
-
Li, M.1
Cao, H.2
Hong, Y.3
Gu, J.D.4
-
17
-
-
58449112245
-
Diversity of methanogenic archaea in a mangrove sediment and isolation of a new Methanococcoides strain
-
Lyimo TJ, Pol A, Jetten MS, den Camp HJ (2009) Diversity of methanogenic archaea in a mangrove sediment and isolation of a new Methanococcoides strain. FEMS Microbiol Lett 291: 247-253.
-
(2009)
FEMS Microbiol Lett
, vol.291
, pp. 247-253
-
-
Lyimo, T.J.1
Pol, A.2
Jetten, M.S.3
den Camp, H.J.4
-
18
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59: 695-700.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
de Waal, E.C.2
Uitterlinden, A.G.3
-
19
-
-
33646497904
-
Ammonia-oxidising Crenarchaeota: important players in the nitrogen cycle?
-
Nicol GW, Schleper C (2006) Ammonia-oxidising Crenarchaeota: important players in the nitrogen cycle? Trends Microbiol 14: 207-212.
-
(2006)
Trends Microbiol
, vol.14
, pp. 207-212
-
-
Nicol, G.W.1
Schleper, C.2
-
20
-
-
0030805150
-
Distribution of bacterioplankton in meromictic lake saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
-
Øvreas L, Forney L, Daae FL, Torsvik V (1997) Distribution of bacterioplankton in meromictic lake saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl Environ Microbiol 63: 3367-3373.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 3367-3373
-
-
Øvreas, L.1
Forney, L.2
Daae, F.L.3
Torsvik, V.4
-
21
-
-
42149108694
-
Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary
-
Sahan E, Muyzer G (2008) Diversity and spatio-temporal distribution of ammonia-oxidizing Archaea and Bacteria in sediments of the Westerschelde estuary. FEMS Microbiol Ecol 64: 175-186.
-
(2008)
FEMS Microbiol Ecol
, vol.64
, pp. 175-186
-
-
Sahan, E.1
Muyzer, G.2
-
22
-
-
40949097432
-
Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary
-
Santoro AE, Francis CA, Sieyes NR, Boehm AB (2008) Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary. Environ Microbiol 10: 1068-1079.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1068-1079
-
-
Santoro, A.E.1
Francis, C.A.2
Sieyes, N.R.3
Boehm, A.B.4
-
23
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
Schloss PD, Handelsman J (2005) Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-1506.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
24
-
-
33751407160
-
The impact of shrimp farming effluent on bacterial communities in mangrove waters, Ceara, Brazil
-
Sousa OV, Macrae A, Menezes FGR, Gomes NCM, Vieira RHSF, Mendonça-Hagler LCS (2006) The impact of shrimp farming effluent on bacterial communities in mangrove waters, Ceara, Brazil. Mar Pollut Bull 52: 1725-1734.
-
(2006)
Mar Pollut Bull
, vol.52
, pp. 1725-1734
-
-
Sousa, O.V.1
Macrae, A.2
Menezes, F.G.R.3
Gomes, N.C.M.4
Vieira, R.H.S.F.5
Mendonça-Hagler, L.C.S.6
-
25
-
-
0033614964
-
Missing lithotroph identified as new planctomycete
-
Strous M, Fuerst JA, Kramer EHM, Logemann S, Muyzer G, van de Pas-Schoonen KT, Webb R, Kuenen J, Jetten MSM (1999) Missing lithotroph identified as new planctomycete. Nature 400: 446-449.
-
(1999)
Nature
, vol.400
, pp. 446-449
-
-
Strous, M.1
Fuerst, J.A.2
Kramer, E.H.M.3
Logemann, S.4
Muyzer, G.5
van de Pas-Schoonen, K.T.6
Webb, R.7
Kuenen, J.8
Jetten, M.S.M.9
-
26
-
-
77949277052
-
Microbial community response to a simulated hydrocarbon spill in mangrove sediments
-
Taketani RG, Franco NO, Rosado AS, van Elsas JD (2010a) Microbial community response to a simulated hydrocarbon spill in mangrove sediments. J Microbiol 48: 7-15.
-
(2010)
J Microbiol
, vol.48
, pp. 7-15
-
-
Taketani, R.G.1
Franco, N.O.2
Rosado, A.S.3
van Elsas, J.D.4
-
27
-
-
77951665889
-
Diversity and identification of methanogenic archaea and sulphate-reducing bacteria in sediments from a pristine tropical mangrove
-
Taketani RG, Yoshiura CA, Dias ACF, Andreote FD, Tsai SM (2010b) Diversity and identification of methanogenic archaea and sulphate-reducing bacteria in sediments from a pristine tropical mangrove. Antonie van Leeuwenhoek 97: 401-411.
-
(2010)
Antonie Van Leeuwenhoek
, vol.97
, pp. 401-411
-
-
Taketani, R.G.1
Yoshiura, C.A.2
Dias, A.C.F.3
Andreote, F.D.4
Tsai, S.M.5
-
28
-
-
28644435323
-
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crearchaeota in nitrogen cycling
-
Treusch AH, Leininger S, Kletzin A, Schuster SC, Klenk H-P, Schleper C (2005) Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crearchaeota in nitrogen cycling. Environ Microbiol 7: 1985-1995.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1985-1995
-
-
Treusch, A.H.1
Leininger, S.2
Kletzin, A.3
Schuster, S.C.4
Klenk, H.-P.5
Schleper, C.6
-
30
-
-
0025300402
-
Towards a natural system of organisms: proposal for the domains archaea, bacteria, and eukarya
-
Woese CR, Kandler O, Wheels ML (1990) Towards a natural system of organisms: proposal for the domains archaea, bacteria, and eukarya. Proc Natl Acad Sci USA 87: 4576-4579.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheels, M.L.3
-
31
-
-
33947182125
-
Archaeal communities in mangrove soil characterized by 16S rRNA gene clones
-
Yan B, Hong K, Yu ZN (2006) Archaeal communities in mangrove soil characterized by 16S rRNA gene clones. J Microbiol 44: 566-571.
-
(2006)
J Microbiol
, vol.44
, pp. 566-571
-
-
Yan, B.1
Hong, K.2
Yu, Z.N.3
|