Characterization of the gene encoding pisatin demethylase (FoPDA1) in Fusarium oxysporum

Molecular Plant-Microbe Interactions

Volumn 24, Issue 12, 2011, Pages 1482-1491

  Coleman, Jeffrey J ^a,c   Wasmann, Catherine C ^a   Usami, Toshiyuki ^b   White, Gerard J ^a   Temporini, Esteban D ^a,d   McCluskey, Kevin ^a,e   Van Etten, Hans D ^a  

^a UNIVERSITY OF ARIZONA   (United States)

^b CHIBA UNIVERSITY   (Japan)

^c MASSACHUSETTS GENERAL HOSPITAL   (United States)

^d Vilmorin Inc   (United States)

^e UNIVERSITY OF MISSOURI KANSAS CITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME P450; FUNGAL RNA; MESSENGER RNA; O DEMETHYLASE; PISATIN; PISATIN DEMETHYLASE; PLANT DNA; PTEROCARPAN DERIVATIVE;

ARTICLE; CHEMISTRY; CHROMOSOME MAP; CLUSTER ANALYSIS; DNA SEQUENCE; ENZYMOLOGY; FUSARIUM; GENETICS; HORIZONTAL GENE TRANSFER; HOST PATHOGEN INTERACTION; METABOLISM; MICROBIOLOGY; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; NUCLEOTIDE SEQUENCE; PATHOGENICITY; PEA; PHYLOGENY; PLANT DISEASE; TIME; VIRULENCE;

BASE SEQUENCE; CHROMOSOME MAPPING; CLONING, MOLECULAR; CLUSTER ANALYSIS; CYTOCHROME P-450 ENZYME SYSTEM; DNA, PLANT; FUSARIUM; GENE TRANSFER, HORIZONTAL; HOST-PATHOGEN INTERACTIONS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; OXIDOREDUCTASES, O-DEMETHYLATING; PEAS; PHYLOGENY; PLANT DISEASES; PTEROCARPANS; RNA, FUNGAL; RNA, MESSENGER; SEQUENCE ANALYSIS, DNA; TIME FACTORS; VIRULENCE;

FUNGI; FUSARIUM OXYSPORUM; FUSARIUM OXYSPORUM F. SP. PISI; HAEMATONECTRIA HAEMATOCOCCA; PISUM SATIVUM;

EID: 81255197942     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI-05-11-0119     Document Type: Article

References (45)

1. Baayen, R. P., O'Donnell, K., Bonants, P. J. M., Cigelnik, E., Kroon, L. P. N. M., Roebroeck, E. J. A., and Waalwijk, C. 2000. Gene genealogies and AFLP analyses in the Fusarium oxysporum complex identify monophyletic and nonmonophyletic formae speciales causing wilt and rot diseases. Phytopathology 90:891-900. (Pubitemid 30610483)
2. Ciuffetti, L. M., and Van Etten, H. D. 1996. Virulence of a pisatin-deficient Nectria haematococca MPVI isolate is increased by transformation with a pisatin demethylase gene. Mol. Plant-Microbe Interact. 9:787-792. (Pubitemid 27015801)
3. Coleman, J. J., White, G. J., Rodriguez-Carres, M., and Van Etten, H. D. 2011. An ABC transporter and a cytochrome P450 of Nectria haematococca MPVI are virulence factors on pea and are the major tolerance mechanisms to the phytoalexin pisatin. Mol. Plant-Microbe Interact. 24:368-374.
4. Cruickshank, I. A. M. 1962. Studies on phytoalexins. IV The antimicrobial spectrum of pisatin. Aust. J. Biol. Sci. 15:147-159.
5. Delserone, L. M., McCluskey, K., Matthews, D. E., and Van Etten, H. D. 1999. Pisatin demethylation by fungal pathogens and nonpathogens of pea: Association with pisatin tolerance and virulence. Physiol. Mol. Plant Pathol. 55:317-326. (Pubitemid 30063141)
6. Di Pietro, A., Madrid, M. P., Caracuel, Z., Delgado-Jarana, J., and Roncero, M. I. G. 2003. Fusarium oxysporum: Exploring the molecular arsenal of a vascular wilt fungus. Mol. Plant Pathol. 4:315-325. (Pubitemid 37144123)
7. Fowler, T., Berka, R. M., and Ward, M. 1990. Regulation of the glaA gene of Aspergillus niger. Curr. Genet. 18:537-545.
8. Funnell, D. L., and Van Etten, H. D. 2002. Pisatin demethylase genes are on dispensable chromosomes while genes for pathogenicity on carrot and ripe tomato are on other chromosomes in Nectria haematococca. Mol. Plant-Microbe Interact. 15:840-846. (Pubitemid 34915528)
9. Funnell, D. L., Matthews, P. S., and Van Etten, H. D. 2002. Identification of new pisatin demethylase genes (PDA5 and PDA7) in Nectria haematococca and non-Mendelian segregation of pisatin demethylating ability and virulence on pea due to loss of chromosomal elements. Fungal Genet. Biol. 37:121-133. (Pubitemid 35333770)
10. George, H. L. 1998. Biochemical characterization of pisatin demethylases from fungal pea pathogens. Ph. D. thesis, University of Arizona.
11. George, H. L., and Van Etten, H. D. 2001. Characterization of pisatininducible cytochrome P450s in fungal pathogens of pea that detoxify the pea phytoalexin pisatin. Fungal Genet. Biol. 33:37-48. (Pubitemid 34229815)
12. George, H. L., Hirsch, K., and Van Etten, H. D. 1998. Biochemical properties of the products of cytochrome P450 genes (PDA) encoding pisatin demethylase activity in Nectria haematococca. Arch. Microbiol. 170:147-154.
13. Gordon, T. R., and Martyn, R. D. 1997. The evolutionary biology of Fusarium oxysporum. Annu. Rev. Phytopathol. 35:111-128.
14. Haglund, W. A., and Kraft, J. M. 1979. Fusarium oxysporum f. sp. pisi, race 6: Occurrence and distribution. Phytopathology 69:818-820.
15. Han, Y., Liu, X., Benny, U., Kistler H. C, and Van Etten, H. D. 2001. Genes determining pathogenicity to pea are clustered on a supernumerary chromosome in the fungal plant pathogen Nectria haematococca. Plant J. 25:305-314. (Pubitemid 32192093)
16. Kerstin, S., Bodker, L., and Rosendahl, S. 2002. Population structure and pathogenicity of members of the Fusarium oxysporum complex isolated from soil and root necrosis of pea (Pisum sativum L.). FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol. 42:367-374. (Pubitemid 35346591)
17. Khan, R., and Straney, D. C. 1999. Regulatory signals influencing expression of the PDA1 gene of Nectria haematococca MPVI in culture and during pathogenesis of pea. Mol. Plant-Microbe Interact. 12:733-742. (Pubitemid 29355156)
18. Khan, R., Tan, R., Mariscal, A. G., and Straney, D. 2003. A binuclear zinc transcription factor binds the host isoflavonoid-responsive element in a fungal cytochrome p450 gene responsible for detoxification. Mol. Microbiol. 49:117-130. (Pubitemid 36792008)
19. Kistler, H. C, and Van Etten, H. D. 1984a. Three non-allelic genes for pisatin demethylation in the fungus Nectria haematococca. J. Gen. Microbiol. 130:2595-2603. (Pubitemid 14016449)
20. Kupfer, D. M., Drabenstot, S. D., Buchanan, K. L., Lai, H., Zhu, H., Dyer, D. W., Roe, B. A., and Murphy, J. W. 2004. Introns and splicing elements of five diverse fungi. Eukaryot. Cell 3:1088-1100. (Pubitemid 39385216)
21. Liu, X. G., Inlow, M., and Van Etten, H. D. 2003. Expression profile of pea pathogenicity (PEP) genes in vivo and in vitro, characterization of the flanking regions of the PEP cluster and evidence that the PEP cluster region resulted from horizontal gene transfer in the fungal pathogen Nectria haematococca. Curr. Genet. 44:95-103. (Pubitemid 37441604)
22. -ΔΔCt method. Methods 25:402-408. (Pubitemid 34164012)
23. Ma, L.-J., van der Does, H. C., Borkovich, K. A., Coleman, J. J., Daboussi, M.-J., Di Pietro, A., Dufresne, M., Freitag, M., Grabherr, M., Henrissat, B., Houterman, P. M., Kang, S., Shim, W.-B., Woloshuk, C., Xie, X., Xu, J.-R., Antoniw, J., Baker, S. E., Bluhm, B. H., Breakspear, A., Brown, D. W., Butchko, R. A. E., Chapman, S., Coulson, R., Coutinho, P. M., Danchin, E. G. J., Diener, A., Gale, L. R., Gardnier, D. M., Goff, S., Hammond-Kosack, K. E., Hilburn, K., Hua-Van, A., Jonkers, W., Kazan, K., Kodira, C. D., Koehrsen, M., Kumar, L., Lee, Y.-H., Li, L., Manners, J. M., Miranda-Saavedra, D., Mukherjee, M., Park, G., Park, J., Park, S.-Y., Proctor, R. H., Regev, A., Ruiz-Roldan, M. C., Sain, D., Sakthikumar, S., Sykes, S., Schwartz, D. C., Turgeon, B. G., Wapinski, I., Yoder, O., Young, S., Zeng, Q., Zhou, S., Galagan, J., Cuomo, C. A., Kistler, H. C, and Rep, M. 2010. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature 464:367-373.
24. Mackintosh, S. F., Matthews, D. E., and Van Etten, H. D. 1989. Two additional genes for pisatin demethylation and their relationship to the pathogenicity of Nectria haematococca on pea. Mol. Plant-Microbe Interact. 4:341-349.
25. Maloney, A. P., and Van Etten, H. D. 1994. A gene from the fungal plant pathogen Nectria haematococca that encodes the phytoalexin-detoxifying enzyme defines a new cytochrome P450 family. Mol. Gen. Genet. 243:506-514. (Pubitemid 24178691)
26. Miao, V. P. W., and Van Etten, H. D. 1992. Three genes for metabolism of the phytoalexin maackiain in the plant pathogen Nectria haematococca: Meiotic instability and relationship to a new gene for pisatin demethylase. Appl. Environ. Microbiol. 58:801-808.
27. Miao, V. P. W., Matthews, D. E., and Van Etten, H. D. 1991. Identification and chromosomal locations of a family of cytochrome P-450 genes for pisatin detoxification in the fungus Nectria haematococca. Mol. Gen. Genet. 226:214-223.
28. Michielse, C. B., and Rep, M. 2009. Pathogen profile update: Fusarium oxysporum. Mol. Plant Pathol. 10:311-324.
29. Morrissey, J. P., and Osbourn, A. E. 1999. Fungal resistance to plant antibiotics as a mechanism of pathogenesis. Microbiol. Mol. Biol. Rev. 63:708-724. (Pubitemid 29422787)
30. O'Donnell, K., Kistler, H. C., Cigelnik, E., and Ploetz, R. C. 1998. Multiply evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proc. Natl. Acad. Sci. U. S. A. 95:2044-2049. (Pubitemid 28145891)
31. O'Donnell, K., Gueidan, C., Sink, S., Johnston, P. R., Crous, P. W., Glenn, A., Riley, R., Zitomer, N. C., Colyer, P., Waalwijk, C., van der Lee, T., Moretti, A., Kang, S., Kim, H.-S., Geiser, D. M., Juba, J. H., Baayen, R. P., Cromey, M. G., Bithell, S., Sutton, D. A., Skovgaard, K., Ploetz, R., Kistler, H. C., Elliott, M., Davis, M., and Sarver, B. A. J. 2009. A twolocus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex. Fungal Genet. Biol. 46:936-948.
32. Orbach, M. J., Vollrath, D., Davis, R. W., and Yanofsky, C. 1988. An electrophoretic karyotype of Neurospora crassa. Mol. Cell. Biol. 8:1469-1473.
33. Reimmann, C., and Van Etten, H. D. 1994. Cloning and characterization of the PDA6-1 gene encoding a cytochrome P-450 which detoxifies the phytoalexin pisatin from garden pea. Gene 146:221-226. (Pubitemid 24288077)
34. Sambrook, J., and Russell, D. W. 2001. Molecular Cloning: A Laboratory Manual, third ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, U. S. A..
35. Smith, T. L., Gaskell, J., Berka, R. M., Yang, M., Henner, D. J., and Cullen, D. 1990. The promoter of the glucoamylase-encoding gene of Aspergillus niger functions in Ustilago maydis. Gene 88:259-262. (Pubitemid 20170976)
36. Stevens, R. B. 1974. Mycology Guidebook. University of Washington Press, Seattle.
37. Straney, D. C, and Van Etten, H. D. 1994. Characterization of the PDA1 promoter of Nectria haematococca and identification of a region that binds a pisatin-responsive DNA binding factor. Mol. Plant-Microbe Interact. 7:256-266. (Pubitemid 2085757)
38. Temporini, E. D., and Van Etten, H. D. 2002. Distribution of the pea pathogenicity genes in the fungus Nectria haematococca mating population VI. Curr. Genet. 41:107-114. (Pubitemid 36075967)
39. Temporini, E. D., and Van Etten, H. D. 2004. An analysis of the phylogenetic distribution of the pea pathogenicity genes of Nectria haematococca MPVI supports the hypothesis of their origin by horizontal transfer and uncovers a potentially new pathogen of garden pea: Neocosmospora boniensis. Curr. Genet. 46:29-36. (Pubitemid 39077334)
40. Van Etten, H. D., and Barz, W. 1981. Expression of pisatin demethylating ability in Nectria haematococca. Arch. Microbiol. 129:56-60.
41. Van Etten, H. D., Matthews, P. S., Tegtmeier, K. J., Dietert, M. F, and Stein, J. I. 1980. The association of pisatin tolerance and demethylation with virulence on pea in Nectria haematococca. Physiol. Plant Pathol. 16:257-269.
42. Van Etten, H. D., Matthews, D. E., and Matthews, P. S. 1989. Phytoalexin detoxification: Importance for pathogenicity and practical implications. Annu. Rev. Phytopathol. 27:143-164.
43. Van Etten, H. D., Temporini, E., and Wasmann, C. 2001. Phytoalexin (and phytoanticipin) tolerance as a virulence trait: Why is it not required by all pathogens? Physiol. Mol. Plant Pathol. 59:83-93. (Pubitemid 33092142)
44. Wasmann, C. C, and Van Etten, H. D. 1996. Transformation-mediated chromosome loss and disruption of a gene for pisatin demethylase decrease the virulence of Nectria haematococca on pea. Mol. Plant-Microbe Interact. 9:793-803. (Pubitemid 27015802)
45. Zhao, X., Xue, C., Kim, Y., and Xu, J.-R. 2004. A ligation-PCR approach for generating gene replacement constructs in Magnaporthe grisea. Fungal Genet. Newl. 51:17-18.