Enhancement of phenol degradation by soil bioaugmentation with Pseudomonas sp. JS150

Journal of Applied Microbiology

Volumn 111, Issue 6, 2011, Pages 1357-1370

  Mrozik, A ^a   Miga, S ^a   Piotrowska Seget, Z ^a  

^a UNIVERSITY OF SILESIA   (Poland)

Author keywords

Bioaugmentation; Biodegradation; FAMEs; Phenol; Pseudomonas sp. JS150; Survival

Indexed keywords

BACTERIA; CARBON; CLAY; FATTY ACIDS; PHENOLS; PROPANE; SOIL POLLUTION;

BIO-AUGMENTATION; FAME; GENETICALLY MODIFIED; JS150; PHENOL DEGRADATION; PHENOLS REMOVAL; PSEUDOMONA SP.; PSEUDOMONAS SP; SOIL BIOAUGMENTATION; SURVIVAL;

BIODEGRADATION;

FATTY ACID ESTER; PHENOL;

BACTERIUM; BIODEGRADATION; CLAY SOIL; CONTAMINATED LAND; FATTY ACID; GENETICALLY MODIFIED ORGANISM; HUMIC ACID; INOCULATION; PHENOL; SOIL POLLUTION; SURVIVAL;

ARTICLE; BACTERIAL COUNT; BACTERIAL STRAIN; BIODEGRADATION; CLAY; NONHUMAN; PSEUDOMONAS; SAND; SOIL POLLUTION;

PSEUDOMONAS SP.;

EID: 81255171446     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2011.05140.x     Document Type: Article

References (59)

1. Afzal, M., Yousaf, S., Reichenauer, T.G., Kuffner, M. and Sessitsch, A. (2011) Soil type affects plant colonization, activity and catabolic gene expression of inoculated bacterial strains during phytoremediation of diesel. J Hazard Mater 186, 1568-1575.
2. Agency for Toxic Substances and Disease Registry (ATSDR) (1998) Toxicological Profile for Phenol (Update). Atlanta, GA: Public Health Service, U.S. Department of Health and Human Services.
3. Budavari, S. (ed.) (1996) The Merck Index: An Encyclopedia of Chemicals, Drugs, and Biologicals. Whitehouse Station, NJ: Merck.
4. Chen, W.M., Chang, J.S., Wu, C.H. and Chang, S.C. (2004) Characterization of phenol and trichloroethene degradation by the rhizobium Ralstonia taiwanensis. Res Microbiol 155, 672-680.
5. Das, K. and Mukherjee, A.K. (2007) Crude petroleum-oil biodegradation efficiency of Bacillus subtilis and Pseudomonas aeruginosa strain isolated from a petroleum-oil contaminated soil from North-East India. Bioresour Technol 98, 1339-1345.
6. Davis, J.W. and Madsen, S. (1996) Factors affecting the biodegradation of toluene in soil. Chemosphere 33, 107-130.
7. 6. Phase Trans 80, 131-140.
8. Diefenbach, R., Heipieper, H.J. and Keweloh, H. (1992) The conversion of cis into trans unsaturated fatty acids in Pseudomonas putida P8: evidence for a role in the regulation of membrane fluidity. Appl Microbiol Biotechnol 38, 382-387.
9. Dott, W., Feidieker, D., Kampfer, P., Schleibinger, H. and Strechel, S. (1989) Comparison of autochthonous and commercially available cultures with respect to their effectiveness in fuel-oil degradation. J Ind Microbiol 4, 365-373.
10. Dunn, R.J.K., Welsh, D.T., Teasdale, P.R., Lee, S.Y., Lemckert, C.J. and Meziane, T. (2008) Investigating the distribution and sources of organic matter in surface sediment of Coombabah Lake (Australia) using elemental, isotopic and fatty acid biomarkers. Cont Shelf Res 28, 2535-2549.
11. Fischer, J., Schauer, F. and Heipieper, H.J. (2010) The trans/cis ratio of unsaturated fatty acids is not applicable as biomarker for environmental stress in long-term contaminated habitats. Appl Microbiol Biotechnol 87, 365-371.
12. Goldstein, R.M., Mallory, L.M. and Alexander, M. (1985) Reasons for possible failure of inoculation to enhance biodegradation. Appl Environ Microbiol 50, 977-983.
13. Goswami, M., Shivaraman, N. and Singh, R.P. (2005) Microbial metabolism of 2-chlorophenol, phenol and p-cresol by Rhodococcus erythropolis M1 in co-culture with Pseudomonas fluorescens P1. Microbiol Res 160, 101-109.
14. Guimarães, B.C.M., Arends, J.B.A., van der Ha, D., Van de Wiele, T., Boony, N. and Verstraete, W. (2010) Microbial services and their management: recent progresses in soil bioremediation technology. Appl Soil Ecol 46, 157-167.
15. Haigler, B.E., Pettigrew, C.H.A. and Spain, J.C. (1992) Biodegradation of mixtures of substituted benzenes by Pseudomonas sp. JS150. Appl Environ Microbiol 58, 2237-2244.
16. Hanscha, C., McKarnsb, S.C., Smith, C.J. and Doolittle, D.J. (2000) Comparative QSAR evidence for a free-radical mechanism of phenol-induced toxicity. Chem Biol Interact 127, 61-72.
17. Heinaru, E., Merimaa, M., Viggor, S., Lehiste, M., Leito, I., Truu, J. and Heinaru, A. (2005) Biodegradation efficiency of functionally important populations selected for bioaugmentation in phenol- and oil-polluted area. FEMS Microbiol Ecol 51, 363-373.
18. Heipieper, H.J. and de Bont, J.A.M. (1994) Adaptation of Psedomonas putida S12 to ethanol and toluene at the level of fatty acid composition of membranes. Appl Environ Microbiol 60, 4440-4444.
19. Islam, Md.R., Trivedim, P., Palaniappan, P., Reddy, M.S. and Sa, T. (2009) Evaluating the effect of fertilizer application on soil microbial community structure in rice based cropping system using fatty acid methyl esters (FAME) analysis. World J Microbiol Biotechnol 25, 1115-1117.
20. Juhanson, J., Truu, J., Heinaru, E. and Heinaru, A. (2009) Survival and catabolic performance of introduced Pseudomonas strains during phytoremediation and bioaugmentation field experiment. FEMS Microbiol Ecol 70, 446-455.
21. Karamalidis, A.K., Evangelou, A.C., Karabika, E., Koukku, A.I., Drainas, C. and Voudrias, E.A. (2010) Laboratory scale bioremediation of petroleum-contaminated soil by indigenous microorganisms and added Pseudomonas aeruginosa strain Spet. Bioresour Technol 101, 6545-6552.
22. Kargi, F. and Serkan, E. (2004) Toxicity and batch biodegradation kinetics of 2, 4 dichlorophenol by pure Pseudomonas putida culture. Enz Microb Technol 35, 424-428.
23. Kaur, A., Chaudhary, A., Kaur, A., Choudhary, R. and Kaushik, R. (2005) Phospholipid fatty acids - a bioindicator of environment monitoring and assessment in soil ecosystem. Curr Sci 89, 1103-1112.
24. Khan, F.I., Husain, T. and Hejazi, R. (2004) An overview and analysis of site remediation technologies. J Environ Manage 71, 95-122.
25. Kojima, Y., Itada, N. and Hayaishi, O. (1961) Metapyrocatechase a new catechol cleaving enzyme. J Biol Chem 236, 2223-2231.
26. Kozdrój, J. (2000) Microflora of technogenous wastes characterized by fatty acid profiling. Microbiol Res 155, 149-156.
27. Kozdrój, J. and van Elsas, J.D. (2001) Structural diversity of microbial communities in arable soils of a heavily industrialised area determined by PCR-DGGE fingerprinting and FAME profiling. Appl Soil Ecol 17, 31-42.
28. Leahy, J.G. and Colwell, R.R. (1990) Microbial degradation of hydrocarbons in the environment. Microbiol Mol Biol Rev 54, 305-315.
29. Lityński, T., Jurkowska, H. and Gorlah, E. (1972) Chemical and Agricultural Analysis. Warsaw: Polish Scientific Press.
30. Liu, Y.J., Zhang, A.N. and Wang, X.C. (2009) Biodegradation of phenol by using free and immobilized cells of Acinetobacter sp. XA05 and Sphingomonas sp. FG03. Biochem Eng J 44, 187-192.
31. Lurie, J. and Rybnikova, I. (1968) Chemical Analysis of Industrial Sewages. Moscow: Gaschmizdat.
32. Mariano, A.P., Angelis, D.F., Pirôllo, M.P.S., Contiero, J. and Bonotto, D.M. (2009) Investigation about the efficiency of the bioaugmentation technique when applied to diesel oil contaminated soils. Braz Arch Biol Technol 5, 1297-1312.
33. Mazzoli, R., Pessione, E., Giuffrida, M.G., Fattori, P., Barello, C., Giunta, C. and Lindley, N.D. (2007) Degradation of aromatic compounds by Acinetobacter radioresistens S13: growth characteristics on single substrates and mixtures. Arch Microbiol 188, 55-68.
34. Mrozik, A. and Piotrowska-Seget, Z. (2010) Bioaugmentation as a strategy for cleaning up of soils contaminated with aromatic compounds. Microbiol Res 165, 363-375.
35. Mrozik, A., Piotrowska-Seget, Z. and Łabuzek, S. (2008) FAMEs profiles of phenol-degrading Pseudomonas stutzeri introduced into soil. Int Biodeterior Biodegradation 62, 319-324.
36. Mrozik, A., Cycoń, M. and Piotrowska-Seget, Z. (2010) Changes of FAME profiles as a marker of phenol degradation in different soils inoculated with Pseudomonas sp. CF600. Int Biodeterior Biodegradation 64, 86-96.
37. Nagamani, A. and Lowry, M. (2009) Phenol biodegradation by Rhodococcus coprophilus isolated from semi arid soil samples of Pali, Rajasthan. Int J Appl Environ Sci 3, 294-302.
38. Nam, K. and Kim, J.Y. (2002) Role of loosely bound humic substances and humin in the bioavailability of phenanthrene aged soil. Environ Pollut 118, 427-433.
39. Nasseri, S., Kalantary, R.R., Nourich, N., Naddafi, K., Mahvi, A.H. and Baradaran, N. (2010) Influence of bioaugmentation in biodegradation of PAHs-contaminated soil in bio-slurry phase reactor. Iran J Environ Health Sci Eng 7, 199-208.
40. Paller, G., Hommel, R.K. and Kleber, H.P. (1995) Phenol degradation by Acinetobacter calcoaceticus NCIB 8250. J Basic Microbiol 35, 325-335.
41. Pradham, A. and Ingle, A.O. (2007) Mineralization of phenol by a Serratia plymuthica strain GC isolated from sludge samples. Int Biodeterior Biodegradation 60, 103-108.
42. Quezada, M., Buitrón, G., Moreno-Andrade, I., Moreno, G. and López-Martin, L.M. (2007) The use of fatty acid methyl esters as biomarkers to determine aerobic, facultatively and anaerobic communities in wastewater treatment systems. FEMS Microbiol Lett 266, 75-82.
43. Ruberto, L., Vazquez, S.C., Dias, R.L., Hernández, E.A., Coria, S.H., Levin, G., Balbo, A.L. and Mac Cormack, W.P. (2010) Small-case studies towards a rational use of bioaugmentation in an Antarctic hydrocarbon-contaminated soil. Antarct Sci 22, 463-469.
44. Sasser, M. (1990) Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. MIDI Technical Note 101. Newark, USA: Microbial ID, Inc.
45. Schröder, M., Müller, C., Posten, C., Deckwer, W.D. and Hecht, V. (1997) Inhibition kinetics of phenol degradation from unstable steady-state data. Biotechnol Bioeng 54, 567-576.
46. Sejáková, Z., Dercová, K. and Tóthová, L. (2009) Biodegradation and ecotoxicity of soil contaminated by pentachlorophenol applying bioaugmentation and addition of sorbents. World J Microbiol Biotechnol 25, 243-252.
47. Silva, I.S., Santos, E.C., Menezes, C.R., Faria, A.F., Franciscon, E., Grossman, M. and Durrant, L.R. (2009) Bioremediation of a polyaromatic hydrocarbon contaminated soil by native soil microbiota and bioaugmentation with isolated microbial consortia. Bioresour Technol 100, 4669-4675.
48. Simon, M.A., Bonnier, J.S., Page, C.A., Townsend, R.T., Mueller, D.C., Fuller, C.B. and Autenrieth, R.L. (2004) Evaluation of two commercial bioaugmentation products for enhanced removal of petroleum from a wetland. Ecol Eng 22, 263-277.
49. Sobiecka, E., Cedzynska, K., Bielski, C. and Antizar-Ladislao, B. (2009) Biological treatment of transformer oil using commercial mixtures of microorganisms. Int Biodeterior Biodegradation 63, 328-333.
50. Stalwood, B., Shears, J., Williams, P.A. and Hughes, K.A. (2005) Low temperature bioremediation of oil-contaminated soil using biostimulation and bioaugmentation with a Pseudomonas sp. from maritime Antarctica. J Appl Microbiol 99, 794-802.
51. Teng, Y., Luo, Y., Liu, Z. and Christie, P. (2010) Effect of bioaugmentation by Pyrococcus sp. strain HPD-2 on the soil microbial community and removal of polycyclic aromatic hydrocarbons from an aged contaminated soil. Bioresour Technol 101, 3437-3443.
52. Thompson, I.P., Van der Gast, C.J., Ciric, L. and Singer, A.C. (2005) Bioaugmentation for bioremediation: the challenge of strain selection. Environ Microbiol 7, 909-915.
53. Tyagi, M., da Fonseca, M.M.R. and de Carvalho, C.C.C.R. (2011) Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes. Biodegradation 22, 232-241.
54. van Veen, J.A., van Overbeek, L.S. and van Elsas, J.D. (1997) Fate and activity of microorganisms introduced into soil. Microbiol Mol Biol Rev 61, 121-135.
55. Vinken, R., Schäffer, A. and Ji, R. (2005) Abiotic association of soil-borne monomeric phenols with humic acids. Org Geochem 36, 583-593.
56. Vogel, T.M. (1996) Bioaugmentation as a soil bioremediation approach. Curr Opin Biotechnol 7, 311-316.
57. Wang, J.L., Mao, Z.Y., Han, L.P. and Qjan, Y. (2004) Bioremediation of quinoline-contaminated soil using bioaugmentation in slurry-phase reactor. Biomed Environ Sci 17, 187-195.
58. Weber, F.J. and de Bont, J.A.M. (1996) Adaptation mechanisms of microorganisms to the toxic effects of organic solvents on membranes. Biochim Biophys Acta 1286, 225-245.
59. Yang, C.F. and Lee, C.M. (2007) Enrichment, isolation, and characterization of phenol-degrading Pseudomonas resinovorans strain P-1 and Brevibacillus sp. strain P-6. Int Biodeterior Biodegradation 59, 206-210.