Identification and characterisation of the Mpeg1 homologue in the South African abalone, Haliotis midae

Fish and Shellfish Immunology

Volumn 31, Issue 6, 2011, Pages 754-764

  Kemp, Ian K ^a   Coyne, Vernon E ^a  

^a UNIVERSITY OF CAPE TOWN   (South Africa)

Author keywords

Abalone; Immune response; Macrophage expressed protein

Indexed keywords

BACTERIA (MICROORGANISMS); HALIOTIDAE; HALIOTIS MIDAE; LISTONELLA ANGUILLARUM; NEGIBACTERIA;

EID: 81255157957     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2011.07.010     Document Type: Article

References (47)

1. Sales J., Britz P.J. Research on abalone (Haliotis midae L.) cultivation in South Africa. Aquaculture Research 2001, 32:863-874.
2. Tincu J.A., Taylor S.W. Antimicrobial peptides from marine invertebrates. Antimicrobial Agents and Chemotherapy 2004, 48:3645-3654.
3. Bayne C.J. Origins and evolutionary relationships between the innate and adaptive arms of immune systems. Integrative and Comparative Biology 2003, 43:293-299.
4. Wang G.D., Zhang Z., Zou Z., Jia X., Wang S., Lin P., Wang Y. Molecular cloning and responsive expression of macrophage expressed gene from small abalone Haliotis diversicolor supertexta. Fish & Shellfish Immunology 2008, 24:346-359.
5. Hooper C., Day R., Slocombe R., Handlinger J., Benkendorff K. Stress and immune responses in abalone: limitations in current knowledge and investigative methods based on other models. Fish & Shellfish Immunology 2007, 22:363-379.
6. Humphries J.E., Yoshino T.P. Cellular receptors and signal transduction in molluscan hemocytes: connections with the innate immune system of vertebrates. Integrative and Comparative Biology 2003, 43:305-312.
7. Wiens M., Korzhev M., Krasko A., Thakur N.L., Perovic-Ottstadt S., Breter H.J., et al. Innate immune defense of the sponge Suberites domuncula against bacteria involves a MyD88-dependent signaling pathway. The Journal of Biological Chemistry 2005, 280:27949-27959.
8. Bayne C.J., Hahn U.K., Bender R.C. Mechanisms of molluscan host resistance and of parasite strategies for survival. Parasitology 2001, 123:159-167.
9. Bayne C.J. Phagocytosis and non-self recognition in invertebrates. BioScience 1990, 40:723-729.
10. Loker E.S., Adema C.M., Zhang S., Kepler T.B. Invertebrate immune systems - not homogenous, not simple, not well understood. Immunological Reviews 2004, 198:10-24.
11. Mah S.A., Moy G.W., Swanson W.J., Vacquier V.D. A perforin-like protein from a marine mollusk. Biochemical and Biophysical Research Communications 2004, 316:468-475.
12. Cheng P., Liu X., Zhang G., He J. Cloning and expression analysis of a HSP70 gene from Pacific abalone (Haliotis discus hannai). Fish & Shellfish Immunology 2007, 22:77-87.
13. Liu P.C., Chen Y.C., Lee K.K. Pathogenicity of Vibrio alginolyticus isolated from diseased small abalone H. diversicolor supertexta. Fish & Shellfish Immunology 2001, 104:71-77.
14. Ausubel F., Brent R., Kingston R., Moore E., Seidmen J., Smith J., et al. Current protocols in molecular microbiology 1989, Green Publishing Associates and Wiley-Interscience, Harvard Medical School, USA.
15. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction. Analytical Biochemistry 1987, 162:156-159.
16. Altschul S.F., Madden T.L., Schaffer A.A., Zhang Z., Zhang Z., Miller W., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 1997, 25:3389-3402.
17. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 1999, 41:95-98.
18. Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 1987, 4:406-425.
19. Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biology and Evolution 2007, 24(8):1596-1599.
20. Bendtsen J.D., Jensen L.J., Blom N., Von Heijne G., Brunak S. Feature-based prediction of non-classical and leaderless protein secretion. Protein Engineering, Design and Selection 2004, 17(4):349-356.
21. Rost B., Yachdav G., Liu J. The predict protein server. Nucleic Acids Research 2004, 32:W321-W326.
22. Krogh A., Larsson B., von Heijne G., Sonnhammer E.L.L. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. Journal of Molecular Biology 2001, 305(3):567-580.
23. Sonnhammer E.L.L., von Heijne G., Krogh A. A hidden Markov model for predicting transmembrane helices in protein sequences. Proceedings of the sixth international conference on intelligent systems for molecular biology 1998, 175-182. AAAI Press, California, USA.
24. Sigrist C.J.A., Cerutti L., de Castro E., Langendijk-Genevaux P.S., Bulliard V., Bairoch A., et al. PROSITE, a protein domain database for functional characterization and annotation. Nucleic Acids Research 2010, 38:161-166.
25. Gasteiger E., Hoogland C., Gattiker A., Duvaud S., Wilkins M.R., Appel R.D., et al. Protein identification and analysis tools on the ExPASy server. The proteomics protocols handbook 2005, Humana Press, USA. J.M. Walker (Ed.).
26. Ambrish R., Alper K., Yang Z. I-TASSER: a unified platform for automated protein structure and function prediction. Nature Protocols 2010, 5:725-738.
27. Yang Z. I-TASSER: fully automated protein structure prediction in CASP8. Proteins 2009, S9:100-113.
28. Yang Z. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics 2008, 9:40.
29. Pfaffl W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Research 2001, 29:2002-2007.
30. Ingle R.A., Smith J.A.C., Sweetlove L.J. Responses to nickel in the proteome of the hyperaccumulator plant Alyssum lesbiacum. BioMetals 2005, 18:627-641.
31. Aldridge G.M., Podrebarac D.M., Greenough W.T., Weiler I.J. The use of total protein stains as loading controls: an alternative to high-abundance single-protein controls in semi-quantitative immunoblotting. Journal of Neuroscience Methods 2008, 172:250-254.
32. Wang K.J., Ren H.L., Xu D.D., Cai L., Yang M. Identification of the up-regulated expression genes in hemocytes of variously colored abalone (Haliotis diversicolor Reeve, 1846) challenged with bacteria. Developmental and Comparative Immunology 2008, 32:1326-1347.
33. Spilsbury K., O'Mara M., Wu W.M., Rowe P.B., Symonds G., Takayama Y. Isolation of a novel macrophage-specific gene by differential cDNA Analysis. Blood 1995, 85:1620-1629.
34. Fong J.H., Marchler-Bauer A. Protein subfamily assignment using the Conserved Domain Database. BMC Research Notes 2008, 1:114.
35. Kondos S.C., Hatfaludi T., Voskoboinik I., Trapani J.A., Law R.H.P., Whisstock J.C., et al. The structure and function of mammalian membrane-attack complex/perforin-like proteins. Tissue Antigens 2010, 76:341-361.
36. Hofmann F., Feil R., Kleppisch T., Schlossmann J. Function of cGMP-dependent protein kinases as revealed by gene deletion. Physiological Reviews 2006, 86:1-23.
37. Macey B.M., Coyne V.E. Improved growth rate and disease resistance in farmed Haliotis midae through probiotic treatment. Aquaculture 2005, 245:249-261.
38. Malham S.K., Lacoste A., Bart F.G., Cueff A., Poulet S.A. Evidence for a direct link between stress and immunity in the mollusc Haliotis tuberculata. Journal of Experimental Zoology 2003, 295A:136-144.
39. Rodriguez J., Le Moullac G. State of the art of immunological tools and health control of penaeid shrimp. Aquaculture 2000, 191:109-119.
40. Li C., Yeh S., Chen J. The immune response of white shrimp Litopenaeus vannamei following Vibrio alginolyticus injection. Fish & Shellfish Immunology 2008, 25:853-860.
41. Cheng W., Hsiao I.S., Chen J.C. Effect of ammonia on the immune response of Taiwan abalone Haliotis diversicolor supertexta and its susceptibility to Vibrio parahaemolyticus. Fish & Shellfish Immunology 2004, 17:193-202.
42. Chen F., Liu H., Bo J., Ren H., Wang K. Identification of genes differentially expressed in hemocytes of Scylla paramamosain in response to lipopolysaccharide. Fish & Shellfish Immunology 2010, 28:167-177.
43. Miller D.J., Hemmrich G., Ball E.E., Hayward D.C., Khalturin K., Funayama N., et al. The innate immune repertoire in Cnidaria - ancestral complexity and stochastic gene loss. Genome Biology 2007, 8(4):R59.
44. Zhou J., Cai Z., Zhu X., Li L., Gao Y. Innate immune parameters and haemolymph protein expression profile to evaluate the immunotoxicity of tributyltin on abalone (Haliotis diversicolor supertexta). Developmental and Comparative Immunology 2010, 34(10):1059-1067.
45. Lacoste A., Malham S., Gelebart F., Cueff A., Poulet S.A. Stress-induced immune changes in the oyster Crassostrea gigas. Developmental and Comparative Immunology 2002, 26:1-9.
46. Olafsen J.A. Interactions between fish larvae and bacteria in marine aquaculture. Aquaculture 2001, 200:223-247.
47. De Zoysa M., Whang I., Lee Y., Lee S., Lee J.-S., Lee J. Defensin from disk abalone Haliotis discus discus: molecular cloning, sequence characterization and immune response against bacterial infection. Fish & Shellfish Immunology 2010, 28:261-266.