Structure of cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 67, Issue 11, 2011, Pages 1345-1349

  Bianchetti, Christopher M ^a   Elsen, Nathaniel L ^a   Fox, Brian G ^a   Phillips, George N ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

cellobiose; Clostridium thermocellum; glycoside hydrolase family 94; phosphate; phosphorylases

Indexed keywords

CELLOBIOSE PHOSPHORYLASE; GLUCOSYLTRANSFERASE; PHOSPHATE;

ARTICLE; BINDING SITE; CHEMICAL STRUCTURE; CHEMISTRY; CLOSTRIDIUM THERMOCELLUM; ENZYME SPECIFICITY; ENZYMOLOGY; METABOLISM; PROTEIN BINDING; PROTEIN QUATERNARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

BINDING SITES; CLOSTRIDIUM THERMOCELLUM; CRYSTALLOGRAPHY, X-RAY; GLUCOSYLTRANSFERASES; MODELS, MOLECULAR; PHOSPHATES; PROTEIN BINDING; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; SUBSTRATE SPECIFICITY;

BACTERIA (MICROORGANISMS); CLOSTRIDIUM THERMOCELLUM;

EID: 80955133192     PISSN: None     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309111032660     Document Type: Article

References (28)

1. Adams, P. D. et al. (2010). Acta Cryst. D 66, 213-221.
2. Aleshin, A. E., Feng, P. H., Honzatko, R. B. & Reilly, P. J. (2003). J. Mol. Biol. 327, 61-73.
3. Chen, V. B., Arendall, W. B., Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S. & Richardson, D. C. (2010). Acta Cryst. D 66, 12-21.
4. Coutinho, P. M., Deleury, E., Davies, G. J. & Henrissat, B. (2003). J. Mol. Biol. 328, 307-317.
5. DeLano, W. L. (2002). PyMOL. http://www.pymol.org.
6. Demain, A. L., Newcomb, M. & Wu, J. H. D. (2005). Microbiol. Mol. Biol. Rev. 69, 124-154.
7. Egloff, M. P., Uppenberg, J., Haalck, L. & van Tilbeurgh, H. (2001). Structure, 9, 689-697.
8. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D 60, 2126-2132.
9. Henrissat, B. & Bairoch, A. (1996). Biochem. J. 316, 695-696.
10. Hidaka, M., Honda, Y., Kitaoka, M., Nirasawa, S., Hayashi, K., Wakagi, T.
11. Shoun, H. & Fushinobu, S. (2004). Structure, 12, 937-947.
12. Hidaka, M., Kitaoka, M., Hayashi, K., Wakagi, T., Shoun, H. & Fushinobu, S. (2006). Biochem. J. 398, 37-43.
13. Holm, L. & Rosenstrom, P. (2010). Nucleic Acids Res. 38, W545-W549.
14. Imamura, H., Fushinobu, S., Yamamoto, M., Kumasaka, T., Jeon, B.-S., Wakagi, T. & Matsuzawa, H. (2003). J. Biol. Chem. 278, 19378-19386.
15. Jacobson, R. H., Zhang, X.-J., DuBose, R. F. & Matthews, B. W. (1994). Nature (London), 369, 761-766.
16. Johnson, E. A., Sakajoh, M., Halliwell, G., Madia, A. & Demain, A. L. (1982). Appl. Environ. Microbiol. 43, 1125-1132.
17. Krissinel, E. & Henrick, K. (2007). J. Mol. Biol. 372, 774-797.
18. Lynd, L. R., Weimer, P. J., van Zyl, W. H. & Pretorius, I. S. (2002). Microbiol. Mol. Biol. Rev. 66, 506-577.
19. McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C. & Read, R. J. (2007). J. Appl. Cryst. 40, 658-674.
20. Mitchell, W. J. (1998). Adv. Microb. Physiol. 39, 31-130.
21. Mizuno, M., Tonozuka, T., Suzuki, S., Uotsu-Tomita, R., Kamitori, S., Nishikawa, A. & Sakano, Y. (2004). J. Biol. Chem. 279, 10575-10583.
22. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
23. Riederer, A., Takasuka, T. E., Makino, S., Stevenson, D. M., Bukhman, Y. V., Elsen, N. L. & Fox, B. G. (2011). Appl. Environ. Microbiol. 77, 1243-1253.
24. Sorimachi, K., Jacks, A. J., Le Gal-Coëffet, M.-F., Williamson, G., Archer, D. B. & Williamson, M. P. (1996). J. Mol. Biol. 259, 970-987.
25. Sreenath, H. K., Bingman, C. A., Buchan, B. W., Seder, K. D., Burns, B. T., Geetha, H. V., Jeon, W. B., Vojtik, F. C., Aceti, D. J., Frederick, R. O., Phillips, G. N. & Fox, B. G. (2005). Protein Expr. Purif. 40, 256-267.
26. Stam, M. R., Blanc, E., Coutinho, P. M. & Henrissat, B. (2005). Carbohydr. Res. 340, 2728-2734.
27. Strobel, H. J., Caldwell, F. C. & Dawson, K. A. (1995). Appl. Environ. Microbiol. 61, 4012-4015.
28. Zhang, Y.-H. P. & Lynd, L. R. (2005). J. Bacteriol. 187, 99-106.