High population diversity and increasing importance of the Eucalyptus stem canker pathogen, Teratosphaeria zuluensis, in South China

Australasian Plant Pathology

Volumn 40, Issue 4, 2011, Pages 407-415

  Chen, Shuai Fei ^a,b   Barnes, Irene ^a   Chungu, Donald ^a   Roux, Jolanda ^a   Wingfield, Michael J ^a   Xie, Yao Jian ^b   Zhou, Xu Dong ^a,b  

^a UNIVERSITY OF PRETORIA   (South Africa)

^b RESEARCH INSTITUTE OF FORESTRY   (China)

Author keywords

Coniothyrium canker; Genetic diversity; Microsatellites; Plantation health

Indexed keywords

CONIOTHYRIUM; EUCALYPTUS; TERATOSPHAERIA;

EID: 80755152560     PISSN: 08153191     EISSN: 14486032     Source Type: Journal    
DOI: 10.1007/s13313-011-0051-0     Document Type: Conference Paper

References (47)

1. Agapow PM, Burt A (2001) Indices of multilocus linkage disequilibrium. Mol Ecol Notes 1:101-102 (Pubitemid 33691862)
2. Andjic V, Barber PA, Carnegie AJ, Hardy GSJ, Wingfield MJ, Burgess TI (2007) Phylogenetic reassessment supports accommodation of Phaeophleospora and Colletogloeopsis from eucalypts in Kirramyces. Mycol Res 111:1184-1198 (Pubitemid 350116566)
3. Burgess TI, Barber PA, Sufaati S, Xu DP, Hardy GES, Dell B (2007) Mycosphaerella spp. on Eucalyptus in Asia: new species; new hosts and new records. Fungal Divers 24:135-157
4. Chen RS, Boeger JM, McDonald BA (1994) Genetic stability in a population of a plant pathogenic fungus over time. Mol Ecol 3:209-218 (Pubitemid 2106105)
5. Chungu D (2010) Pathogens associated with plantation tree diseases in Zambia. University of Pretoria, Pretoria, MSc thesis
6. Chungu D, Muimba-Kankolongo A, Wingfield MJ, Roux J (2010) Identification of fungal pathogens occurring in eucalypt and pine plantations in Zambia by comparing DNA sequences. Forestry 83:507-515
7. Cortinas MN, Koch N, Thain J, Wingfield BD, Wingfield MJ (2004) First record of the Eucalyptus stem canker pathogen, Coniothyrium zuluense from Hawaii. Australas Plant Pathol 33:309-312 (Pubitemid 38946144)
8. Cortinas MN, Barnes I, Wingfield BD, Wingfield MJ (2006a) Polymorphic microsatellite markers for the Eucalyptus fungal pathogen Colletogloeopsis zuluensis. Mol Ecol Notes 6:780-783 (Pubitemid 44252605)
9. Cortinas MN, Burgess T, Dell B, Xu D, Crous PW, Wingfield BD, Wingfield MJ (2006b) First record of Colletogloeopsis zuluense comb. nov., causing stem canker of Eucalyptus in China. Mycol Res 110:229-236 (Pubitemid 44081754)
10. Cortinas MN, Crous PW, Wingfield BD, Wingfield MJ (2006c) Multilocus gene phylogenies and phenotypic characters distinguish two species within the Colletogloeopsis zuluensis complex associated with Eucalyptus stem cankers. Stud Mycol 55:135-148
11. Cortinas MN, Barnes I, Wingfield MJ, Wingfield BD (2010) Genetic diversity in the Eucalyptus stem pathogen Kirramyces zuluensis. Australas Plant Pathol 39:383-393
12. Crous PW, Braun U, Groenewald JZ (2007) Mycosphaerella is polyphyletic. Stud Mycol 58:1-32 (Pubitemid 47572398)
13. Crous PW, Groenewald JZ, Summerell BA, Wingfield BD, Wingfield MJ (2009) Co-occurring species of Teratosphaeria on Eucalyptus. Persoonia 22:38-48
14. Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14:2611-2620 (Pubitemid 40886055)
15. Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164:1567-1587 (Pubitemid 37102217)
16. Feau N, Hamelin RC, Vandecasteele C, Stanosz GR, Bernier L (2005) Genetic structure of Mycosphaerella populorum (anamorph Septoria musiva) populations in north-central and northeastern north America. Phytopathology 95:608-616 (Pubitemid 40764568)
17. Geldenhuys CJ (1997) Native forest regeneration in pine and eucalypt plantations in Northern Province, South Africa. Forest Ecol Manag 99:101-115 (Pubitemid 27510296)
18. Gezahgne A, Roux J, Thu PQ, Wingfield MJ (2003) Coniothyrium stem canker of Eucalyptus, new to Argentina and Vietnam. S Afr J Sci 99:587-588 (Pubitemid 38449018)
19. Gezahgne A, Cortinas MN, Wingfield MJ, Roux J (2005) Characterisation of the Coniothyrium stem canker pathogen on Eucalyptus camaldulensis in Ethiopia. Australas Plant Pathol 34:85-90 (Pubitemid 40600132)
20. Goudet J (2001) FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3.2). http://www2. unil.ch/popgen/softwares/ fstat.htm
21. Hunter GC, van der Merwe NA, Burgess TI, Carnegie AJ, Wingfield BD, Crous PW, Wingfield MJ (2008) Global movement and population biology of Mycosphaerella nubilosa infecting leaves of cold-tolerant Eucalyptus globulus and E. nitens. Plant Pathol 57:235-242 (Pubitemid 351422487)
22. Keane PJ, Kile GA, Podger FD, Brown BN (2000) Diseases and pathogens of eucalypts. CSIRO Publishing, Australia
23. Maynard Smith J, Smith NH, O'Rourke M, Spratt BG (1993) How clonal are bacteria? P Natl Acad Sci USA 90:4384-4388 (Pubitemid 23148908)
24. Myburg H, Wingfield BD, Wingfield MJ (1999) Phylogeny of Cryphonectria cubensis and allied species inferred from DNA analysis. Mycologia 91:243-250 (Pubitemid 29157945)
25. Nei M (1973) Analysis of gene diversity in subdivided populations. P Natl Acad Sci USA 70:3321-3323
26. Nkaonja RWS (1982) The silviculture of indigenous and exotic forest trees other than pines and eucalypts in Malawi. S Afr For J 121:28-37
27. Old KM, Wingfield MJ, Yuan ZQ (2003) A manual of diseases of eucalypts in South-East Asia. Centre for International Forestry Research, Bogor
28. Pérez CA, Wingfield MJ, Altier NA, Blanchette RA (2009) Mycosphaerellaceae and Teratosphaeriaceae associated with Eucalyptus leaf diseases and stem cankers in Uruguay. For Pathol 39:349-360
29. Pérez G, Slippers B, Wingfield BD, Hunter GC, Wingfield MJ (2010) Micro-and macrospatial scale analyses illustrates mixed mating strategies and extensive geneflow in populations of an invasive haploid pathogen. Mol Ecol 19:1801-1813
30. Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959 (Pubitemid 30397141)
31. Qi SX (2002) Eucalyptus in China. China Forestry House Press, Beijing (In Chinese)
32. Raeder U, Broda P (1985) Rapid preparation of DNA from filamentous fungi. Lett Appl Microbiol 1:17-20 (Pubitemid 16253847)
33. Roux J, Wingfield MJ, Cibrián D (2002) First report of Coniothyrium canker in Mexico. Plant Pathol 51:382 (Pubitemid 34623398)
34. Roux J, Meke G, Kanyi B, Mwangi L, Mbaga A, Hunter GC, Nakabonge G, Wingfield MJ (2005) Diseases of plantation forestry tree species in Eastern and Southern Africa. S Afr J Sci 101:409-413
35. Stoddart JA, Taylor JF (1988) Genotypic diversity: estimation and prediction in samples. Genetics 118:705-711
36. Taylor JW, Jacobson DJ, Fisher MC (1999) The evolution of asexual fungi: reproduction, speciation and classification. Annu Rev Phytopathol 37:197-246 (Pubitemid 29523934)
37. Van Zyl LM, Coutinho TA, Wingfield MJ (2002a) Morphological, cultural and pathogenic characteristics of Coniothyrium zuluense isolates from different plantation regions in South Africa. Mycopathologia 155:149-153
38. Van Zyl LM, Coutinho TA, Wingfield MJ, Pongpanich K, Wingfield BD (2002b) Morphological and molecular relatedness of geographically diverse isolates of Coniothyrium zuluense from South Africa and Thailand. Mycol Res 106:51-59 (Pubitemid 34186314)
39. Weir BS (1996) Genetic data analysis II. Sinauer Associates, Inc., Massachusetts
40. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols, a guide to methods and applications. Academic, San Diego, pp 315-322
41. Wingfield MJ, Crous PW, Couthinho TA (1996) A serious new canker disease of Eucalyptus in South Africa caused by a new species of Coniothyrium. Mycopathologia 136:139-145 (Pubitemid 27366835)
42. Wingfield MJ, Slippers B, Hurley BP, Coutinho TA, Wingfield BD, Roux J (2008) Eucalypt pests and diseases: growing threats to plantation productivity. Southern Forests 70:139-144
43. Workman PL, Niswander JD (1970) Population studies in Southwestern Indian tribes. II. Local genetic differentiation in the Papago. Am J Hum Genet 22:24-49
44. Wright S (1978) Evolution and the genetics of populations, vol. 4: variability within and among natural populations. University of Chicago Press, Chicago
45. Yeh FC, Yang R-C, Boyle T (1999) POPGENE. Version 1.31. Microsoft windows based freeware for population genetic analysis. University of Alberta, Alberta
46. Zhan J, Pettway RE, McDonald BA (2003) The global genetic structure of the wheat pathogen Mycosphaerella graminicola is characterized by high nuclear diversity, low mitochondrial diversity, regular recombination, and gene flow. Fungal Genet Biol 38:286-297 (Pubitemid 36398175)
47. Zhou XD, Xie YJ, Chen SF, Wingfield MJ (2008) Diseases of eucalypt plantations in China: challenges and opportunities. Fungal Divers 32:1-7