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Volumn 39, Issue 4-6, 2011, Pages 266-276

Genetic structure of loggerhead turtle (Caretta caretta) populations in Turkey

Author keywords

Caretta caretta; Mediterranean; Microsatellite; Mitochondrial DNA; Population genetics; Turkey

Indexed keywords

BEACH; CONSERVATION MANAGEMENT; GENE FLOW; GENETIC MARKER; GENETIC STRUCTURE; HATCHING; MITOCHONDRIAL DNA; NESTING; TURTLE;

EID: 80054993699     PISSN: 03051978     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bse.2011.08.018     Document Type: Article
Times cited : (29)

References (48)
  • 2
    • 0032979748 scopus 로고    scopus 로고
    • Maximum likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach
    • Beerli P., Felsenstein J. Maximum likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach. Genetics 1999, 152:763-773.
    • (1999) Genetics , vol.152 , pp. 763-773
    • Beerli, P.1    Felsenstein, J.2
  • 3
    • 32144440085 scopus 로고    scopus 로고
    • Comparison of Bayesian and maximum-likelihood inference of population genetic parameters
    • Beerli P. Comparison of Bayesian and maximum-likelihood inference of population genetic parameters. Bioinformatics 2006, 22:341-345.
    • (2006) Bioinformatics , vol.22 , pp. 341-345
    • Beerli, P.1
  • 4
    • 0027331733 scopus 로고
    • Population structure of loggerhead turtles (Caretta caretta) in the northwestern Atlantic Ocean and Mediterranean Sea
    • Bowen B.W., Avise J.C., Richardson J.I., Meylan A.B., Margaritoulis D., Hopkins-Murphy S.R. Population structure of loggerhead turtles (Caretta caretta) in the northwestern Atlantic Ocean and Mediterranean Sea. Conserv. Biol. 1993, 7:834-844.
    • (1993) Conserv. Biol. , vol.7 , pp. 834-844
    • Bowen, B.W.1    Avise, J.C.2    Richardson, J.I.3    Meylan, A.B.4    Margaritoulis, D.5    Hopkins-Murphy, S.R.6
  • 6
    • 21344474833 scopus 로고    scopus 로고
    • Conservation implications of complex population structure: lessons from the loggerhead turtle (Caretta caretta)
    • Bowen B.W., Bass A.L., Soares L., Toonen R.J. Conservation implications of complex population structure: lessons from the loggerhead turtle (Caretta caretta). Mol. Ecol. 2005, 14:2389-2402.
    • (2005) Mol. Ecol. , vol.14 , pp. 2389-2402
    • Bowen, B.W.1    Bass, A.L.2    Soares, L.3    Toonen, R.J.4
  • 7
    • 0000087285 scopus 로고    scopus 로고
    • Estimating the number of green and loggerhead turtles nesting annually in the Mediterranean
    • Broderick A.C., Glen F., Godley B.J., Hays G.C. Estimating the number of green and loggerhead turtles nesting annually in the Mediterranean. Oryx 2002, 36:227-235.
    • (2002) Oryx , vol.36 , pp. 227-235
    • Broderick, A.C.1    Glen, F.2    Godley, B.J.3    Hays, G.C.4
  • 8
    • 34547137368 scopus 로고    scopus 로고
    • The genetic structure of the loggerhead sea turtle (Caretta caretta) in the Mediterranean as revealed by nuclear and mitochondrial DNA and its conservation implications
    • Carreras C., Pascual M., Cardona L., Aguilar A., Margaritoulis D., Rees A., Turkozan O., Levy Y., Gasith A., Aureggi M., Khalil M. The genetic structure of the loggerhead sea turtle (Caretta caretta) in the Mediterranean as revealed by nuclear and mitochondrial DNA and its conservation implications. Conserv. Genet. 2007, 8:761-775.
    • (2007) Conserv. Genet. , vol.8 , pp. 761-775
    • Carreras, C.1    Pascual, M.2    Cardona, L.3    Aguilar, A.4    Margaritoulis, D.5    Rees, A.6    Turkozan, O.7    Levy, Y.8    Gasith, A.9    Aureggi, M.10    Khalil, M.11
  • 11
    • 53749089194 scopus 로고    scopus 로고
    • Mitochondrial DNA reveals regional and interregional importance of the central Mediterranean African shelf for loggerhead sea turtles (Caretta caretta)
    • Casale P., Freggi D., Gratton P., Argano R., Oliverio M. Mitochondrial DNA reveals regional and interregional importance of the central Mediterranean African shelf for loggerhead sea turtles (Caretta caretta). Sci. Mar. 2008, 72:541-548.
    • (2008) Sci. Mar. , vol.72 , pp. 541-548
    • Casale, P.1    Freggi, D.2    Gratton, P.3    Argano, R.4    Oliverio, M.5
  • 13
    • 0032775059 scopus 로고    scopus 로고
    • Intra individual sequence diversity and a hierarchical approach to the study of mitochondrial DNA mutations
    • Chen J.Z., Hebert P.D.N. Intra individual sequence diversity and a hierarchical approach to the study of mitochondrial DNA mutations. Mutat. Res. 1999, 434:205-217.
    • (1999) Mutat. Res. , vol.434 , pp. 205-217
    • Chen, J.Z.1    Hebert, P.D.N.2
  • 14
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gane genealogies
    • Clement M., Posada D., Crandall K.A. TCS: a computer program to estimate gane genealogies. Mol. Ecol. 2000, 9:1657-1660.
    • (2000) Mol. Ecol. , vol.9 , pp. 1657-1660
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 15
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet J.M., Luikart G. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 1996, 144:2001-2014.
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 16
    • 0034564097 scopus 로고    scopus 로고
    • Microsatellite mutations in the germline: implications for evolutionary inference
    • Ellegren H. Microsatellite mutations in the germline: implications for evolutionary inference. Trends Genet. 2000, 16:551-558.
    • (2000) Trends Genet. , vol.16 , pp. 551-558
    • Ellegren, H.1
  • 17
    • 0000227555 scopus 로고    scopus 로고
    • Population structure of loggerhead turtle (Caretta caretta) nesting colonies in the Atlantic and Mediterranean as inferred from mitochondrial DNA control region sequences
    • Encalada S.E., Bjorndal K.A., Bolten A.B., Zurita C.J., Schroeder B., Possardt E., Sears C.J., Bowen B.W. Population structure of loggerhead turtle (Caretta caretta) nesting colonies in the Atlantic and Mediterranean as inferred from mitochondrial DNA control region sequences. Mar. Biol. 1998, 130:567-575.
    • (1998) Mar. Biol. , vol.130 , pp. 567-575
    • Encalada, S.E.1    Bjorndal, K.A.2    Bolten, A.B.3    Zurita, C.J.4    Schroeder, B.5    Possardt, E.6    Sears, C.J.7    Bowen, B.W.8
  • 18
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using software STRUCTURE: a simulation study
    • Evanno G., Regnaut S., Goudet J. Detecting the number of clusters of individuals using software STRUCTURE: a simulation study. Mol. Ecol. 2005, 2611-2620.
    • (2005) Mol. Ecol. , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 19
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
    • Excoffier L., Smouse P.E., Quattro J.M. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 1992, 131:479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 20
    • 0032078024 scopus 로고    scopus 로고
    • Single paternity of clutches and sperm storage in the promiscuous green turtle (Chelonia mydas)
    • FitzSimmons N.N. Single paternity of clutches and sperm storage in the promiscuous green turtle (Chelonia mydas). Mol. Ecol. 1998, 7:575-584.
    • (1998) Mol. Ecol. , vol.7 , pp. 575-584
    • FitzSimmons, N.N.1
  • 21
    • 0028910661 scopus 로고
    • Conservation and dynamics of microsatellite loci over 300 millions years of marine turtle evolution
    • FitzSimmons N.N., Moritz C., Moore S. Conservation and dynamics of microsatellite loci over 300 millions years of marine turtle evolution. Mol. Biol. Evol. 1995, 12:432-440.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 432-440
    • FitzSimmons, N.N.1    Moritz, C.2    Moore, S.3
  • 22
    • 70349869187 scopus 로고    scopus 로고
    • Loggerhead turtle (Caretta caretta) matrilines in the Mediterranean: further evidence of genetic diversity and connectivity
    • Garofalo L., Mingozzi T., Mico A., Novelletto A. Loggerhead turtle (Caretta caretta) matrilines in the Mediterranean: further evidence of genetic diversity and connectivity. Mar. Biol. 2009, 156:2085-2095.
    • (2009) Mar. Biol. , vol.156 , pp. 2085-2095
    • Garofalo, L.1    Mingozzi, T.2    Mico, A.3    Novelletto, A.4
  • 23
    • 0026689178 scopus 로고
    • Performing the exact test of Hardy-Weinberg proportions for multiple alleles
    • Guo S.W., Thompson E.A. Performing the exact test of Hardy-Weinberg proportions for multiple alleles. Biometrics 1992, 48:361-372.
    • (1992) Biometrics , vol.48 , pp. 361-372
    • Guo, S.W.1    Thompson, E.A.2
  • 24
    • 0002051540 scopus 로고    scopus 로고
    • Bioedit: a user friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T.A. Bioedit: a user friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 25
    • 0026512283 scopus 로고
    • A statistical test for detecting geographic subdivision
    • Hudson R.R., Boss D.D., Kaplan N.L. A statistical test for detecting geographic subdivision. Mol. Biol. Evol. 1992, 9:138-151.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 138-151
    • Hudson, R.R.1    Boss, D.D.2    Kaplan, N.L.3
  • 26
    • 84861482678 scopus 로고    scopus 로고
    • IUCN, 2011 IUCN Red List of threatened species.
    • IUCN, 2011. 2011 IUCN Red List of threatened species. http://www.iucnredlist.org.
    • (2011)
  • 27
    • 75949146309 scopus 로고
    • The number of alleles that can be maintained in a finite population
    • Kimura M., Crow J.F. The number of alleles that can be maintained in a finite population. Genetics 1964, 49:725-738.
    • (1964) Genetics , vol.49 , pp. 725-738
    • Kimura, M.1    Crow, J.F.2
  • 30
    • 50049085341 scopus 로고    scopus 로고
    • Twelve new polymorphic microsatellite markers from the loggerhead sea turtle (Caretta caretta) and cross-species amplification on other marine turtle species
    • Monzón-Argüello C., Muňoz J., Marco A., López-Juardo L.F., Rico C. Twelve new polymorphic microsatellite markers from the loggerhead sea turtle (Caretta caretta) and cross-species amplification on other marine turtle species. Conserv. Genet. 2008, 9:1045-1049.
    • (2008) Conserv. Genet. , vol.9 , pp. 1045-1049
    • Monzón-Argüello, C.1    Muňoz, J.2    Marco, A.3    López-Juardo, L.F.4    Rico, C.5
  • 31
    • 0036007854 scopus 로고    scopus 로고
    • Multiple paternity in loggerhead turtle (Caretta caretta) nests on Melbourne Beach, Florida: a microsatellite analysis
    • Moore M.K., Ball R.M. Multiple paternity in loggerhead turtle (Caretta caretta) nests on Melbourne Beach, Florida: a microsatellite analysis. Mol. Ecol. 2002, 11:281-288.
    • (2002) Mol. Ecol. , vol.11 , pp. 281-288
    • Moore, M.K.1    Ball, R.M.2
  • 32
    • 0020348983 scopus 로고
    • Evolution of human races at the gene level
    • Alan R Liss, New York, B. Bone-Tamir, T. Cohen, R.M. Goodman (Eds.)
    • Nei M. Evolution of human races at the gene level. Human Genetics Part A: The Unfolding Genome 1982, 167-181. Alan R Liss, New York. B. Bone-Tamir, T. Cohen, R.M. Goodman (Eds.).
    • (1982) Human Genetics Part A: The Unfolding Genome , pp. 167-181
    • Nei, M.1
  • 33
    • 0015765702 scopus 로고
    • A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population
    • Ohta T., Kimura M. A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population. Genet. Res. 1973, 22:201-204.
    • (1973) Genet. Res. , vol.22 , pp. 201-204
    • Ohta, T.1    Kimura, M.2
  • 34
    • 0035028399 scopus 로고    scopus 로고
    • Microsatellite variation in colonizing and paleartic populations of Drosophyla suboscura
    • Pascual M., Aquadro C.F., Soto V., Serra L. Microsatellite variation in colonizing and paleartic populations of Drosophyla suboscura. Mol. Biol. Evol. 2001, 18:731-740.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 731-740
    • Pascual, M.1    Aquadro, C.F.2    Soto, V.3    Serra, L.4
  • 36
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J.K., Stephens M., Donnely P. Inference of population structure using multilocus genotype data. Genetics 2000, 945-959.
    • (2000) Genetics , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnely, P.3
  • 37
    • 0000625869 scopus 로고
    • Analyzing tables of statistics tests
    • Rice W.R. Analyzing tables of statistics tests. Evolution 1989, 43:223-225.
    • (1989) Evolution , vol.43 , pp. 223-225
    • Rice, W.R.1
  • 38
    • 36849080837 scopus 로고    scopus 로고
    • Genepop'007: a complete re-implementation of the genepop software for Windows and Linux
    • Rousset F. Genepop'007: a complete re-implementation of the genepop software for Windows and Linux. Mol. Ecol. Resour. 2008, 8:103-106.
    • (2008) Mol. Ecol. Resour. , vol.8 , pp. 103-106
    • Rousset, F.1
  • 39
    • 0347513220 scopus 로고    scopus 로고
    • DnaSP, DNA polymorphizm analyses by the coalescent and other methods
    • Rozas J., Sanchez-Del Barrio J.C., Messeguer X., Rozas R. DnaSP, DNA polymorphizm analyses by the coalescent and other methods. Bioinformatics 2003, 19:2496-2497.
    • (2003) Bioinformatics , vol.19 , pp. 2496-2497
    • Rozas, J.1    Sanchez-Del Barrio, J.C.2    Messeguer, X.3    Rozas, R.4
  • 41
    • 3943060917 scopus 로고    scopus 로고
    • Nesting patterns, reproductive migrations, and foraging areas of loggerhead turtles
    • Smithsonian Books, Washington D. C, A.B. Bolten, B.E. Witherington (Eds.)
    • Schroeder B.A., Foley A.M., Bagley D.A. Nesting patterns, reproductive migrations, and foraging areas of loggerhead turtles. Loggerhead Sea Turtles 2003, 114-124. Smithsonian Books, Washington D. C. A.B. Bolten, B.E. Witherington (Eds.).
    • (2003) Loggerhead Sea Turtles , pp. 114-124
    • Schroeder, B.A.1    Foley, A.M.2    Bagley, D.A.3
  • 42
    • 0029853288 scopus 로고    scopus 로고
    • Evolutionary handicap for turtles
    • Schroth W., Streit B., Schierwater B. Evolutionary handicap for turtles. Nature 1996, 384:521-522.
    • (1996) Nature , vol.384 , pp. 521-522
    • Schroth, W.1    Streit, B.2    Schierwater, B.3
  • 44
    • 0021925705 scopus 로고
    • Extranuclear differentiation and gene flow in the finite island model
    • Takahata N., Palumbi S.R. Extranuclear differentiation and gene flow in the finite island model. Genetics 1985, 109:441-457.
    • (1985) Genetics , vol.109 , pp. 441-457
    • Takahata, N.1    Palumbi, S.R.2
  • 45
    • 0026662698 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III cladogram estimation
    • Templeton A.R., Crandall K.A., Sing C.F. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III cladogram estimation. Genetics 1992, 132:619-633.
    • (1992) Genetics , vol.132 , pp. 619-633
    • Templeton, A.R.1    Crandall, K.A.2    Sing, C.F.3
  • 46
    • 77956378231 scopus 로고    scopus 로고
    • Turkey. In: Casale, P., Margaritoulis, D. (Eds.), Sea Turtles in the Mediterranean: Distribution, Threats and Conservation Prioritiess. IUCN/SSC Marine Turtle Specialist Group, Gland, Switzerland
    • Türkozan, O., Kaska, Y., 2010. Turkey. In: Casale, P., Margaritoulis, D. (Eds.), Sea Turtles in the Mediterranean: Distribution, Threats and Conservation Prioritiess. IUCN/SSC Marine Turtle Specialist Group, Gland, Switzerland, pp. 257-293.
    • (2010) , pp. 257-293
    • Türkozan, O.1    Kaska, Y.2
  • 47
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • Wright S. The genetical structure of populations. Ann. Eugen 1951, 15:323-335.
    • (1951) Ann. Eugen , vol.15 , pp. 323-335
    • Wright, S.1
  • 48
    • 2042455362 scopus 로고
    • Two programs to estimate significance of X2 values using pseudo-probability tests
    • Zaykin D.V., Pudovkin A.I. Two programs to estimate significance of X2 values using pseudo-probability tests. J. Hered. 1993, 84:152.
    • (1993) J. Hered. , vol.84 , pp. 152
    • Zaykin, D.V.1    Pudovkin, A.I.2


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