Bacterial community structure analysis of sediment in the Sagami River, Japan using a rapid approach based on two-dimensional DNA gel electrophoresis mapping with selective primer pairs

Environmental Monitoring and Assessment

Volumn 182, Issue 1-4, 2011, Pages 187-195

  Liu, Guo Hua ^a   Rajendran, Narasimmalu ^a   Amemiya, Takashi ^a   Itoh, Kiminori ^a  

^a YOKOHAMA NATIONAL UNIVERSITY   (Japan)

Author keywords

16S rDNA; 2 DGE mapping; Bacterial community structure; River sediment

Indexed keywords

16S RDNA; 2-DGE MAPPING; BACTERIAL COMMUNITY; BACTERIAL COMMUNITY STRUCTURE; BACTERIAL POPULATION; DENATURING GRADIENT GEL ELECTROPHORESIS; ENVIRONMENTAL PRESSURES; GEL ELECTROPHORESIS; GINI COEFFICIENTS; HIGH RESOLUTION; LORENZ CURVES; MAPPING DATA; RIVER SEDIMENT; RIVER SEDIMENTS; SEDIMENT POLLUTION;

ANOXIC SEDIMENTS; BACTERIOLOGY; ELECTROPHORESIS; EXPONENTIAL FUNCTIONS; GELS; MAPPING; POPULATION STATISTICS; RIVER POLLUTION; SEDIMENTOLOGY; SOCIAL SCIENCES; TWO DIMENSIONAL;

RIVERS;

DNA 16S; NITROGEN; PHOSPHORUS;

BACTERIUM; COMMUNITY STRUCTURE; DNA; ELECTROKINESIS; FLUVIAL DEPOSIT; GEOMICROBIOLOGY; MAPPING; POLLUTION MONITORING; SEDIMENT POLLUTION;

ALPHAPROTEOBACTERIA; AQUATIC FLORA; ARTICLE; BETAPROTEOBACTERIA; COMMUNITY STRUCTURE; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DELTAPROTEOBACTERIA; DNA BASE COMPOSITION; FLEXIBACTERACEAE; GAMMAPROTEOBACTERIA; GINI COEFFICIENT; GRAM POSITIVE BACTERIUM; JAPAN; LORENZ CURVE; MATHEMATICAL PARAMETERS; MICROBIAL BIOMASS; MICROBIAL COMMUNITY; NONHUMAN; POPULATION ABUNDANCE; POPULATION DISTRIBUTION; POPULATION STRUCTURE; RIVER; SEDIMENT; SPECIES RICHNESS; TWO DIMENSIONAL DNA GEL ELECTROPHORESIS; TWO DIMENSIONAL GEL ELECTROPHORESIS;

BACTERIA; BACTERIAL TYPING TECHNIQUES; DNA PRIMERS; ECOSYSTEM; ENVIRONMENTAL MONITORING; GEOLOGIC SEDIMENTS; JAPAN; RIVERS; TWO-DIMENSIONAL DIFFERENCE GEL ELECTROPHORESIS;

HONSHU; JAPAN; KANAGAWA; KANTO; SAGAMI RIVER;

BACTERIA (MICROORGANISMS); DELTAPROTEOBACTERIA; PROTEOBACTERIA;

EID: 80054737347     PISSN: 01676369     EISSN: 15732959     Source Type: Journal    
DOI: 10.1007/s10661-010-1868-7     Document Type: Article

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