-
1
-
-
67651115832
-
Enrichment of a K-strategist microbial population able to biodegrade p-nitrophenol in a sequencing batch reactor
-
Martín-Hernández M, Carrera J, Pérez J and Suárez-Ojeda ME, Enrichment of a K-strategist microbial population able to biodegrade p-nitrophenol in a sequencing batch reactor. Water Res 43: 3871-3883 (2009).
-
(2009)
Water Res
, vol.43
, pp. 3871-3883
-
-
Martín-Hernández, M.1
Carrera, J.2
Pérez, J.3
Suárez-Ojeda, M.E.4
-
2
-
-
3542998144
-
Biodegradation of nitroaromatics and other nitrogen-containing xenobiotics
-
Ye J, Singh A and Ward O, Biodegradation of nitroaromatics and other nitrogen-containing xenobiotics. World J Microbiol Biotechnol 20: 117-135 (2004).
-
(2004)
World J Microbiol Biotechnol
, vol.20
, pp. 117-135
-
-
Ye, J.1
Singh, A.2
Ward, O.3
-
3
-
-
0043126887
-
Kinetics of 4-nitrophenol biodegradation in a sequencing batch reactor
-
Tomei MC, Annesini MC, Luberti R, Cento G and Senia A, Kinetics of 4-nitrophenol biodegradation in a sequencing batch reactor. Water Res 37: 3803-3814 (2003).
-
(2003)
Water Res
, vol.37
, pp. 3803-3814
-
-
Tomei, M.C.1
Annesini, M.C.2
Luberti, R.3
Cento, G.4
Senia, A.5
-
4
-
-
22044450346
-
4-Nitrophenol biodegradation in a sequencing batch reactor operating with aerobic-anoxic cycles
-
Tomei MC and Annesini MC, 4-Nitrophenol biodegradation in a sequencing batch reactor operating with aerobic-anoxic cycles. Environ Sci Technol 39: 5059-5065 (2005).
-
(2005)
Environ Sci Technol
, vol.39
, pp. 5059-5065
-
-
Tomei, M.C.1
Annesini, M.C.2
-
5
-
-
33645771482
-
Biodegradation of p-nitrophenol by aerobic granules in a sequencing batch reactor
-
Yi S, Zhuang W, Wu B, Tay S and Tay J, Biodegradation of p-nitrophenol by aerobic granules in a sequencing batch reactor. Environ Sci Technol 40: 2396-2401 (2006).
-
(2006)
Environ Sci Technol
, vol.40
, pp. 2396-2401
-
-
Yi, S.1
Zhuang, W.2
Wu, B.3
Tay, S.4
Tay, J.5
-
6
-
-
33646526483
-
Microbial and kinetic characterization of pure and mixed cultures aerobically degrading 4-nitrophenol
-
Tomei MC, Rossetti S and Annesini MC, Microbial and kinetic characterization of pure and mixed cultures aerobically degrading 4-nitrophenol. Chemosphere 63: 1801-1808 (2006).
-
(2006)
Chemosphere
, vol.63
, pp. 1801-1808
-
-
Tomei, M.C.1
Rossetti, S.2
Annesini, M.C.3
-
7
-
-
0344734165
-
Growth kinetics of the 4-nitrophenol degrading strain Pseudomonas putida PNP1
-
Löser C, Ait Ouebelli M and Hertel T, Growth kinetics of the 4-nitrophenol degrading strain Pseudomonas putida PNP1. Acta Biotechnol 18: 29-41 (1998).
-
(1998)
Acta Biotechnol
, vol.18
, pp. 29-41
-
-
Löser, C.1
Ait Ouebelli, M.2
Hertel, T.3
-
8
-
-
31344481058
-
Biodegradation of p-nitrophenol by P. putida
-
Kulkarni M and Chaudhari A, Biodegradation of p-nitrophenol by P. putida. Bioresource Technol 97: 982-988 (2006).
-
(2006)
Bioresource Technol
, vol.97
, pp. 982-988
-
-
Kulkarni, M.1
Chaudhari, A.2
-
9
-
-
0036087794
-
Difference in degrading p-nitrophenol between indigenous bacteria in a reactor
-
Shinozaki Y, Kimura K and Nakahara T, Difference in degrading p-nitrophenol between indigenous bacteria in a reactor. J Biosci Bioeng 93: 512-514 (2002).
-
(2002)
J Biosci Bioeng
, vol.93
, pp. 512-514
-
-
Shinozaki, Y.1
Kimura, K.2
Nakahara, T.3
-
10
-
-
0027930350
-
Biodegradation of p-nitrophenol via 1,2,4-benzenetriol by an Arthrobacter sp
-
Jain R, Dreisbach J and Spain J, Biodegradation of p-nitrophenol via 1, 2, 4-benzenetriol by an Arthrobacter sp. Appl Environ Microbiol 60: 3030-3032 (1994).
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 3030-3032
-
-
Jain, R.1
Dreisbach, J.2
Spain, J.3
-
11
-
-
0034696780
-
Plasmid-encoded degradation of p-nitrophenol and 4-nitrocatechol by Arthrobacter protophormiae
-
Chauhan A, Chakraborti A and Jain R, Plasmid-encoded degradation of p-nitrophenol and 4-nitrocatechol by Arthrobacter protophormiae. Biochem Biophys Res Commun 270: 733-740 (2000).
-
(2000)
Biochem Biophys Res Commun
, vol.270
, pp. 733-740
-
-
Chauhan, A.1
Chakraborti, A.2
Jain, R.3
-
12
-
-
35649004922
-
Cloning of a gene cluster involved in the catabolism of p-nitrophenol by Arthrobacter sp. strain JS443 and characterization of the p-nitrophenol monooxygenase
-
Perry LL and Zylstra GJ, Cloning of a gene cluster involved in the catabolism of p-nitrophenol by Arthrobacter sp. strain JS443 and characterization of the p-nitrophenol monooxygenase. J Bacteriol 189: 7563-7572 (2007).
-
(2007)
J Bacteriol
, vol.189
, pp. 7563-7572
-
-
Perry, L.L.1
Zylstra, G.J.2
-
13
-
-
0034102893
-
Degradation of 4-nitrocatechol by Burkholderia cepacia: a plasmid-encoded novel pathway
-
Chauhan A, Samanta SK and Jain RK, Degradation of 4-nitrocatechol by Burkholderia cepacia: a plasmid-encoded novel pathway. J Appl Microbiol 88: 764-772 (2000).
-
(2000)
J Appl Microbiol
, vol.88
, pp. 764-772
-
-
Chauhan, A.1
Samanta, S.K.2
Jain, R.K.3
-
15
-
-
23844508206
-
A microcosm study on bioremediation of p-nitrophenol-contaminated soil using Arthrobacter protophormiae RKJ100
-
Labana S, Singh OV, Basu A, Pandey G and Jain RK, A microcosm study on bioremediation of p-nitrophenol-contaminated soil using Arthrobacter protophormiae RKJ100. Appl Microbiol Biotechnol 68: 417-424 (2005).
-
(2005)
Appl Microbiol Biotechnol
, vol.68
, pp. 417-424
-
-
Labana, S.1
Singh, O.V.2
Basu, A.3
Pandey, G.4
Jain, R.K.5
-
17
-
-
3242807396
-
A novel p-nitrophenol degradation gene cluster from a gram-positive bacterium, Rhodococcus opacus SAO101
-
Kitagawa W, Kimura N and Kamagata Y, A novel p-nitrophenol degradation gene cluster from a gram-positive bacterium, Rhodococcus opacus SAO101. J Bacteriol 186: 4894-4902 (2004).
-
(2004)
J Bacteriol
, vol.186
, pp. 4894-4902
-
-
Kitagawa, W.1
Kimura, N.2
Kamagata, Y.3
-
18
-
-
0025777419
-
Pathway for biodegradation of p-nitrophenol in Moxarella sp
-
Spain J and Gibson D, Pathway for biodegradation of p-nitrophenol in Moxarella sp. Appl Environ Microbiol 57: 812-819 (1991).
-
(1991)
Appl Environ Microbiol
, vol.57
, pp. 812-819
-
-
Spain, J.1
Gibson, D.2
-
19
-
-
80054091974
-
Introduction
-
ed. by Nielsen H, Daims H and Lemmer H. IWA Publishing, London - ().
-
Nielsen H, Daims H and Lemmer H, Introduction, in FISH Handbook for Biological Wastewater Treatment: Identification and Quantification of Microorganisms in Activated Sludge and Biofilms by FISH, ed. by Nielsen H, Daims H and Lemmer H. IWA Publishing, London, pp. 1-7 (2010).
-
(2010)
FISH Handbook for Biological Wastewater Treatment: Identification and Quantification of Microorganisms in Activated Sludge and Biofilms by FISH
, pp. 1-7
-
-
Nielsen, H.1
Daims, H.2
Lemmer, H.3
-
20
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann RI, Ludwig W and Schleifer KH, Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59: 143-69 (1995).
-
(1995)
Microbiol Rev
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
21
-
-
57349161731
-
Practical considerations in the selection and application of fluorescent probes
-
rd edn, ed. by Pawley JB. Springer, New York - ().
-
rd edn, ed. by Pawley JB. Springer, New York, pp. 353-367 (2006).
-
(2006)
Handbook of Biological Confocal Microscopy
, pp. 353-367
-
-
Johnson, I.D.1
-
23
-
-
79953784455
-
Protocol for fluorescent in situ hybridization (FISH) with rRNA-targeted oligonucleotides
-
ed. by Nielsen H, Daims H and Lemmer H. IWA Publishing, London - ().
-
Nielsen JP, Protocol for fluorescent in situ hybridization (FISH) with rRNA-targeted oligonucleotides, in FISH Handbook for Biological Wastewater Treatment: Identification and Quantification of Microorganisms in Activated Sludge and Biofilms by FISH, ed. by Nielsen H, Daims H and Lemmer H. IWA Publishing, London, pp. 72-84 (2010).
-
(2010)
FISH Handbook for Biological Wastewater Treatment: Identification and Quantification of Microorganisms in Activated Sludge and Biofilms by FISH
, pp. 72-84
-
-
Nielsen, J.P.1
-
24
-
-
0000622269
-
In situ identification of microorganisms by whole cell hybridization with rRNA-targeted nucleic acid probes
-
ed. by Akkerman ADL, van Elsas DJ and de Bruijn FJD. Kluwer Academic Publishers, London - ().
-
Amann RI, In situ identification of microorganisms by whole cell hybridization with rRNA-targeted nucleic acid probes, in Molecular Microbial Ecology Manual, ed. by Akkerman ADL, van Elsas DJ and de Bruijn FJD. Kluwer Academic Publishers, London, pp. 1-15 (1995).
-
(1995)
Molecular Microbial Ecology Manual
, pp. 1-15
-
-
Amann, R.I.1
-
25
-
-
0027068041
-
Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions
-
Manz W, Amann R, Ludwig W, Wagner M and Schleifer KH, Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions. Syst Appl Microbiol 15: 593-600 (1992).
-
(1992)
Syst Appl Microbiol
, vol.15
, pp. 593-600
-
-
Manz, W.1
Amann, R.2
Ludwig, W.3
Wagner, M.4
Schleifer, K.H.5
-
26
-
-
21244484895
-
Sensitive multicolour fluorescence in situ hybridization for the identification of environmental microorganisms
-
nd edn, ed. by Kowalchuk G, de Bruijn FJ, Head IM, Akkermans ADL and van Elsas JD. Kluwer Academic Publishers, London - ().
-
nd edn, ed. by Kowalchuk G, de Bruijn FJ, Head IM, Akkermans ADL and van Elsas JD. Kluwer Academic Publishers, London, pp. 711-726 (2004).
-
(2004)
Molecular Microbial Ecology Manual
, pp. 711-726
-
-
Pernthaler, A.1
Pernthaler, J.2
Amann, R.3
-
27
-
-
0033980096
-
Specific and rapid detection by fluorescent in situ hybridization of bacteria in clinical samples obtained from cystic fibrosis patients
-
Hogardt M, Trebesius K, Geiger AM, Hornef M, Rosenecker J and Heesemann J, Specific and rapid detection by fluorescent in situ hybridization of bacteria in clinical samples obtained from cystic fibrosis patients. J Clin Microbiol 38: 818-825 (2000).
-
(2000)
J Clin Microbiol
, vol.38
, pp. 818-825
-
-
Hogardt, M.1
Trebesius, K.2
Geiger, A.M.3
Hornef, M.4
Rosenecker, J.5
Heesemann, J.6
-
28
-
-
17044386980
-
Design and application of an oligonucleotide microarray for the investigation of compost microbial communities
-
Franke-Whittle I, Klammer S and Insam H, Design and application of an oligonucleotide microarray for the investigation of compost microbial communities. J Microbiol Meth 62: 37-56 (2005).
-
(2005)
J Microbiol Meth
, vol.62
, pp. 37-56
-
-
Franke-Whittle, I.1
Klammer, S.2
Insam, H.3
-
29
-
-
0028271364
-
Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge
-
Wagner M, Erhart R, Manz W, Amann R, Lemmer H, Wedi D, et al, Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge. Appl Environ Microbiol 60: 792-800 (1994).
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 792-800
-
-
Wagner, M.1
Erhart, R.2
Manz, W.3
Amann, R.4
Lemmer, H.5
Wedi, D.6
-
30
-
-
0002297064
-
Nucleic acid probes for the identification and in situ detection of pseudomonads
-
ed. by Galli E, Silver S, Witholt B. American Society for Microbiology, Washington - ().
-
Schleifer K-H, Amann R, Ludwig W, Rothemund C, Springer N and Dorn S, Nucleic acid probes for the identification and in situ detection of pseudomonads, in Pseudomonas: Molecular Biology and Biotechnology, ed. by Galli E, Silver S, Witholt B. American Society for Microbiology, Washington, pp. 127-134 (1992).
-
(1992)
Pseudomonas: Molecular Biology and Biotechnology
, pp. 127-134
-
-
Schleifer, K.-H.1
Amann, R.2
Ludwig, W.3
Rothemund, C.4
Springer, N.5
Dorn, S.6
-
31
-
-
0344172842
-
The domain-specific probe EUB338 is insufficient for the detection of all bacteria: development and evaluation of a more comprehensive probe set
-
Daims H, Bruehl A, Amann R, Schleifer KH and Wagner M, The domain-specific probe EUB338 is insufficient for the detection of all bacteria: development and evaluation of a more comprehensive probe set. Syst Appl Microbiol 22: 434-444 (1999).
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 434-444
-
-
Daims, H.1
Bruehl, A.2
Amann, R.3
Schleifer, K.H.4
Wagner, M.5
-
32
-
-
0029859948
-
Characterization of universal small-subunit rRNA hybridization probes for quantitative molecular microbial ecology studies
-
Zheng D, Alm EW, Stahl DA and Raskin L, Characterization of universal small-subunit rRNA hybridization probes for quantitative molecular microbial ecology studies. Appl Environ Microbiol 62: 4504-4513 (1996).
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 4504-4513
-
-
Zheng, D.1
Alm, E.W.2
Stahl, D.A.3
Raskin, L.4
-
33
-
-
33846102841
-
probeBase: an online resource for rRNA-targeted oligonucleotide probes: new features 2007
-
Loy A, Maixner F, Wagner M and Horn M, probeBase: an online resource for rRNA-targeted oligonucleotide probes: new features 2007. Nucleic Acids Res 35: D800-D804 (2007).
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Loy, A.1
Maixner, F.2
Wagner, M.3
Horn, M.4
-
34
-
-
66149174811
-
Automated thresholding method (ATM) for biomass fraction determination using FISH and confocal microscopy
-
Jubany I, Lafuente J, Carrera J and Baeza JA, Automated thresholding method (ATM) for biomass fraction determination using FISH and confocal microscopy. J Chem Technol Biotechnol 84: 1140-1145 (2009).
-
(2009)
J Chem Technol Biotechnol
, vol.84
, pp. 1140-1145
-
-
Jubany, I.1
Lafuente, J.2
Carrera, J.3
Baeza, J.A.4
-
35
-
-
46549086126
-
Improved detection of soil microorganisms using fluorescence in situ hybridization (FISH) and catalyzed reporter deposition (CARD-FISH)
-
Eickhorst T and Tippkötter R, Improved detection of soil microorganisms using fluorescence in situ hybridization (FISH) and catalyzed reporter deposition (CARD-FISH). Soil Biol Biochem 40: 1883-1891 (2008).
-
(2008)
Soil Biol Biochem
, vol.40
, pp. 1883-1891
-
-
Eickhorst, T.1
Tippkötter, R.2
-
36
-
-
8344250319
-
An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments
-
Ishii K, Mußmann M, MacGregor BJ and Amann R, An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments. FEMS Microbiol Ecol 50: 203-212 (2004).
-
(2004)
FEMS Microbiol Ecol
, vol.50
, pp. 203-212
-
-
Ishii, K.1
Mußmann, M.2
MacGregor, B.J.3
Amann, R.4
-
37
-
-
0036239238
-
Identification of bacteria associated with dinoflagellates (dinophyceae) Alexandrium spp. using tyramide signal amplification-fluorescent in situ hybridization and confocal microscopy
-
Biegala IC, Kennaway G, Alverca E, Lennon J-F, Vaulot D and Simon N, Identification of bacteria associated with dinoflagellates (dinophyceae) Alexandrium spp. using tyramide signal amplification-fluorescent in situ hybridization and confocal microscopy. J Phycol 38: 404-411 (2002).
-
(2002)
J Phycol
, vol.38
, pp. 404-411
-
-
Biegala, I.C.1
Kennaway, G.2
Alverca, E.3
Lennon, J.-F.4
Vaulot, D.5
Simon, N.6
-
38
-
-
33646400266
-
Characterisation of the fluorescence from freshwater, planktonic bacteria
-
Elliot S, Lead JR and Baker A, Characterisation of the fluorescence from freshwater, planktonic bacteria. Water Res 40: 2075-2083 (2006).
-
(2006)
Water Res
, vol.40
, pp. 2075-2083
-
-
Elliot, S.1
Lead, J.R.2
Baker, A.3
-
39
-
-
21844468237
-
Rapid identification of microorganisms by intrinsic fluorescence
-
ed. by Nicolau DV, Enderlein J, Leif RC, Farkas DL and Raghavachari R, Proc. SPIE 5699 - ().
-
Bhattaa H, Goldysa EM and Learmonthb R, Rapid identification of microorganisms by intrinsic fluorescence, in Imaging, Manipulation, and Analysis of Biomolecules and Cells: Fundamentals and Applications III, ed. by Nicolau DV, Enderlein J, Leif RC, Farkas DL and Raghavachari R, Proc. SPIE 5699, pp. 9-18 (2005).
-
(2005)
Imaging, Manipulation, and Analysis of Biomolecules and Cells: Fundamentals and Applications III
, pp. 9-18
-
-
Bhattaa, H.1
Goldysa, E.M.2
Learmonthb, R.3
-
40
-
-
0001401638
-
pH effects on fluorescence of umbelliferone
-
Fink DW and Koehler WR, pH effects on fluorescence of umbelliferone. Anal Chem 42: 990-993 (1970).
-
(1970)
Anal Chem
, vol.42
, pp. 990-993
-
-
Fink, D.W.1
Koehler, W.R.2
-
41
-
-
0033140479
-
Study of the effect of pH, salinity, and DOC on the fluorescence of synthetic mixtures of freshwater and marine salts
-
Esteves VI, Santos EBH and Duarte AC, Study of the effect of pH, salinity, and DOC on the fluorescence of synthetic mixtures of freshwater and marine salts. J Environ Monitor 1: 251-254 (1999).
-
(1999)
J Environ Monitor
, vol.1
, pp. 251-254
-
-
Esteves, V.I.1
Santos, E.B.H.2
Duarte, A.C.3
-
42
-
-
77958591229
-
The effect of solvent and pH on the fluorescence excitation and emission spectra of solutions containing fluorescein
-
Cook A and Le A, The effect of solvent and pH on the fluorescence excitation and emission spectra of solutions containing fluorescein. J Phys Chem Lab 10: 44-49 (2006).
-
(2006)
J Phys Chem Lab
, vol.10
, pp. 44-49
-
-
Cook, A.1
Le, A.2
-
43
-
-
0343192453
-
Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms
-
Moter A and Göbel UB, Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms. J Microbiol Meth 41: 85-112 (2000).
-
(2000)
J Microbiol Meth
, vol.41
, pp. 85-112
-
-
Moter, A.1
Göbel, U.B.2
-
44
-
-
33645798851
-
The fluorescent toolbox for assessing protein location and function
-
Giepmans BN, Adams SR, Ellisman MH and Tsien RY, The fluorescent toolbox for assessing protein location and function. Science 312: 217-224 (2006).
-
(2006)
Science
, vol.312
, pp. 217-224
-
-
Giepmans, B.N.1
Adams, S.R.2
Ellisman, M.H.3
Tsien, R.Y.4
|