Rhizosphere competent Pantoea agglomerans enhances maize (Zea mays) and chickpea (Cicer arietinum L.) growth, without altering the rhizosphere functional diversity

Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology

Volumn 100, Issue 3, 2011, Pages 405-413

  Mishra, Aradhana ^a   Chauhan, Puneet Singh ^a   Chaudhry, Vasvi ^a   Tripathi, Manisha ^a   Nautiyal, Chandra Shekhar ^a  

^a CSIR NATIONAL BOTANICAL RESEARCH INSTITUTE   (India)

Author keywords

Chickpea (Cicer arietinum L.); Functional diversity; Maize (Zea mays); Nutrient uptake; Pantoea agglomerans

Indexed keywords

CALCIUM PHOSPHATE; INDOLEACETIC ACID; NITROGEN; PHOSPHORUS; POTASSIUM; SODIUM CHLORIDE;

ARTICLE; BACTERIAL STRAIN; BIOACCUMULATION; BIOSYNTHESIS; CHICKPEA; COLONY FORMING UNIT; CONTROLLED STUDY; GROWING SEASON; GROWTH STIMULATION; IN VITRO STUDY; MAIZE; NONHUMAN; NUCLEOTIDE SEQUENCE; NUTRIENT UPTAKE; PANTOEA AGGLOMERANS; PLANT GROWTH; PRIORITY JOURNAL; RHIZOSPHERE; SPECIES DIVERSITY; SPECIES RICHNESS;

BIODIVERSITY; CICER; MOLECULAR SEQUENCE DATA; PANTOEA; PHYLOGENY; PLANT ROOTS; RHIZOSPHERE; SOIL MICROBIOLOGY; ZEA MAYS;

BACTERIA (MICROORGANISMS); CICER ARIETINUM; PANTOEA AGGLOMERANS; ZEA MAYS;

EID: 80054105124     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-011-9596-8     Document Type: Article

References (40)

1. N Amellal G Burtin F Bartoli T Heulin 1998 Colonization of wheat roots by an exopolysaccharide-producing Pantoea agglomerans strain and its effect on rhizosphere soil aggregation Appl Environ Microbiol 64 3740 3747 9758793 1:CAS:528:DyaK1cXms1ent78%3D (Pubitemid 28462966)
2. FD Andreote UN Rocha WL Araújo JL Azevedo LS van Overbeek 2010 Effect of bacterial inoculation, plant genotype and developmental stage on root-associated and endophytic bacterial communities in potato (Solanum tuberosum) Antonie van Leeuwenhoek 97 389 399 20352404 10.1007/s10482-010-9421-9
3. OO Babalola 2010 Beneficial bacteria of agricultural importance Biotechnol Lett 32 1559 1570 20635120 10.1007/s10529-010-0347-0 1:CAS:528:DC%2BC3cXht1KgsrzJ
4. A Braun-Kiewnick BJ Jacobsen DC Sands 2000 Biological control of Pseudomonas syringae pv. syringae, the causal agent of basal kernel blight of barley, by Antagonistic Pantoea agglomerans Phytopathology 90 368 375 18944586 10.1094/PHYTO.2000.90.4.368 1:STN:280:DC%2BD1cjjslyrsQ%3D%3D (Pubitemid 30172179)
5. M Brick RM Bostock SE Silverstone 1991 Rapid in situ assay for indoleacetic acid production by bacteria immobilized on nitrocellulose membrane Appl Environ Microbiol 57 535 538
6. TP Cañamás I Viñas M Abadias J Usall R Torres N Teixidó 2009 Acid tolerance response induced in the biocontrol agent Pantoea agglomerans CPA-2 and effect on its survival ability in acidic environments Microbiol Res 164 438 450 17475457 10.1016/j.micres.2007.02.007
7. PS Chauhan CS Nautiyal 2010 The purB gene controls rhizosphere colonization by Pantoea agglomerans Lett Appl Microbiol 50 205 210 20002573 10.1111/j.1472-765X.2009.02779.x 1:CAS:528:DC%2BC3cXitVSku7s%3D
8. SG Dastager CK Deepa SC Puneet CS Nautiyal A Pandey 2009 Isolation and characterization of plant growth-promoting strain Pantoea NII-186. From Western Ghat forest soil, India Lett Appl Microbiol 49 20 25 19413772 10.1111/j.1472-765X.2009.02616.x 1:CAS:528:DC%2BD1MXptVarsr4%3D
9. Egamberdiyeva D, Höflich G (2001) Influence of growth promoting bacteria from Uzbekistan and Germany on the growth and nutrient uptake of cotton and wheat on different soils. In: Horst W, Schenk MK, Bürkert A, Claassen N, Flessa H, Frommer WB, Goldbach HE, Olfs HW, Römheld V, Sattelmacher B, Schmidhalter U, Schubert S, von Wirén N, Wittenmayer L (eds) Plant nutrition: food security and sustainability of agro-ecosystems through basic and applied research (Developments in plant and soil sciences). Springer, Netherlands, pp 674-675
10. J Felsenstein 1985 Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 783 791 10.2307/2408678
11. Y Feng D Shen W Song 2006 Rice endophyte Pantoea agglomerans YS19 promotes host plant growth and affects allocations of host photosynthates J Appl Microbiol 100 938 945 16629994 10.1111/j.1365-2672.2006.02843.x 1:CAS:528:DC%2BD28XlvVamsLc%3D
12. CH Fiske Y Subbarow 1925 A colorimetric determination of phosphorus J Biol Chem 66 375 400 1:CAS:528:DyaB28XoslGn
13. JL Garland 1996 Analytical approaches to the characterization of samples of microbial communities using patterns of potential C source utilization Soil Biol Biochem 28 213 221 10.1016/0038-0717(95)00112-3 1:CAS:528: DyaK28XhtlClurs%3D (Pubitemid 2619844)
14. RK Hynes GCY Leung DLM Hirkala LM Nelson 2008 Isolation, selection, and characterization of beneficial rhizobacteria from pea, lentil, and chickpea grown in western Canada Can J Microbiol 54 248 258 18388997 10.1139/W08-008 1:CAS:528:DC%2BD1cXlvFOisL0%3D (Pubitemid 351536363)
15. Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein 242 metabolism. Academic Press, New York, pp 21-132
16. FG Loiret E Ortega D Kleiner P Ortega-Rodes R Rodés Z Dong 2004 A putative new endophytic nitrogen-fixing bacterium Pantoea sp. from sugarcane J Appl Microbiol 97 504 511 15281930 10.1111/j.1365-2672.2004.02329.x 1:CAS:528:DC%2BD2cXoslGktLc%3D (Pubitemid 39208191)
17. HH Long DD Schmidt IT Baldwin 2008 Native bacterial endophytes promote host growth in a species-specific manner; phytohormone manipulations do not result in common growth responses PLoS One 3 e2702 18628963 10.1371/journal. pone.0002702
18. BJJ Lugtenberg L Dekkers GV Bloemberg 2001 Molecular determinants of rhizosphere colonization by Pseudomonas Ann Rev Phytopathol 39 461 490 10.1146/annurev.phyto.39.1.461 1:CAS:528:DC%2BD3MXmvVygsbs%3D (Pubitemid 32965193)
19. P Marschner C-H Yang R Lieberei DE Crowley 2001 Soil and plant specific effects on bacterial community composition in the rhizosphere Soil Biol Biochem 33 1437 1445 10.1016/S0038-0717(01)00052-9 1:CAS:528:DC%2BD3MXmtFSlsrk%3D (Pubitemid 32827729)
20. S Mehta CS Nautiyal 2001 An efficient method for qualitative screening of phosphate-solubilizing bacteria Curr Microbiol 43 51 56 11375664 10.1007/s002840010259 1:CAS:528:DC%2BD3MXjslKgsLs%3D (Pubitemid 32549925)
21. A Mishra CS Nautiyal 2009 Functional diversity of the microbial community in the rhizosphere of chickpea grown in diesel fuel spiked soil amended with Trichoderma ressei using sole-carbon source utilization profiles World J Microbiol Biotechnol 25 1175 1180 10.1007/s11274-009-9998-1 1:CAS:528: DC%2BD1MXnt1Cis7g%3D
22. CS Nautiyal 1997 A method for selection and characterization of rhizosphere-competent bacteria of chickpea Curr Microbiol 34 12 17 8939795 10.1007/s002849900136 1:CAS:528:DyaK2sXhtVOrsrk%3D (Pubitemid 27009789)
23. CS Nautiyal 1999 An efficient microbiological growth medium for screening phosphate solubilizing microorganisms FEMS Microbiol Lett 170 265 720 9919677 10.1111/j.1574-6968.1999.tb13383.x 1:CAS:528:DyaK1cXotFWit7k%3D
24. CS Nautiyal 2009 Self-purificatory Ganga water facilitates death of pathogenic Escherichia coli 157:H7 Curr Microbiol 58 25 29 18810537 10.1007/s00284-008-9260-3 1:CAS:528:DC%2BD1cXhsVymt7bI
25. CS Nautiyal PS Chauhan YL Nene 2007 Medicinal smoke reduces airborne bacteria J Ethnopharmacol 114 446 451 17913417 10.1016/j.jep.2007.08.038 (Pubitemid 350027782)
26. Nautiyal CS, Srivastava S, Chauhan PS (2008) Rhizosphere colonization Molecular determinants from plant-microbe coexistence perspective. In: Nautiyal CS, Dion P (eds) Molecular mechanisms of plant, microbe coexistence soil biology series, vol 15. Springer, Berlin, pp 99-124
27. CS Nautiyal PS Chauhan CR Bhatia 2010 Changes in soil physico-chemical properties and microbial functional diversity due to 14 years of conversion of grassland to organic agriculture in semi-arid agroecosystem Soil Till Res 109 55 60 10.1016/j.still.2010.04.008
28. CS Nautiyal PS Chauhan SM DasGupta K Seem A Varma WJ Staddon 2010 Tripartite interactions among Paenibacillus lentimorbus NRRL B-30488, Piriformospora indica DSM 11827, and Cicer arietinum L World J Microbiol Biotechnol 26 1393 1399 10.1007/s11274-010-0312-z
29. CS Nautiyal A Rehman PS Chauhan 2010 Environmental Escherichia coli occur as natural plant growth-promoting soil bacterium Arch Microbiol 192 185 193 20084366 10.1007/s00203-010-0544-1 1:CAS:528:DC%2BC3cXhvV2hsLw%3D
30. Olsen SR, Sommers LE (1982) Phosphorus. In: Page AL, Miller RH, Keeney DR (eds) Methods of soil analysis: part 2. SSSA, Madison, p 403
31. Page AL, Miller RH, Keeney DR (1982) Methods of soil analysis part 2.1159 chemical and microbiological properties (2nd ed) agronomy, vol 9. ASA SSSA Publishing, Madison, p 1159
32. S Ruppel C Hecht-Buchholz R Remus U Ortmann R Schmelzer 1992 Settlement of the diazotrophic, phytoeffective bacterial strain Pantoea agglomerans on and within winter wheat: an investigation using ELISA and transmission electron microscopy Plant Soil 145 261 273 10.1007/BF00010355
33. JF Salles JA van Veen JD van Elsas 2004 Multivariate analyses of Burkholderia species in soil: effect of crop and land use history Appl Environ Microbiol 70 4012 4020 15240277 10.1128/AEM.70.7.4012-4020.2004 1:CAS:528:DC%2BD2cXmtFWnt78%3D (Pubitemid 38969742)
34. E Sergeeva DLM Hirkala LM Nelson 2007 Production of indole-3-acetic acid, aromatic amino acid aminotransferase activities and plant growth promotion by Pantoea agglomerans rhizosphere isolates Plant Soil 297 1 13 10.1007/s11104-007-9314-5 1:CAS:528:DC%2BD2sXptFegs7Y%3D (Pubitemid 47290536)
35. HJ Son GT Park MS Cha MS Heo 2006 Solubilization of insoluble inorganic phosphates by a novel salt- and pH-tolerant Pantoea agglomerans R-42 isolated from soybean rhizosphere Bioresour Technol 97 204 210 16171676 10.1016/j.biortech.2005.02.021 1:CAS:528:DC%2BD2MXhtVanurnL (Pubitemid 41317967)
36. NS Strigul LV Kravchenko 2006 Mathematical modeling of PGPR inoculation into the rhizosphere Environ Mod Soft 21 1158 1171 10.1016/j.envsoft.2005.06.003 (Pubitemid 43668389)
37. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 25 4876 4888 9396791 10.1093/nar/25.24.4876 1:CAS:528:DyaK1cXntFyntQ%3D%3D (Pubitemid 28022245)
38. SC Verma JK Ladha AK Tripathi 2001 Evaluation of plant growth promoting and colonization ability of endophytic diazotrophs from deep water rice J Biotechnol 91 127 141 11566385 10.1016/S0168-1656(01)00333-9 1:CAS:528:DC%2BD3MXmvVKltLo%3D (Pubitemid 32868776)
39. A Winding N Hendriksen 2007 Comparison of CLPP and enzyme activity assay for functional characterization of bacterial soil communities J Soils Sed 7 411 417 10.1065/jss2007.11.262 1:CAS:528:DC%2BD1cXhtVOrtrs%3D
40. SAI Wright CH Zumoff L Schneider SV Beer 2001 Pantoea agglomerans strain EH318 produces two antibiotics that inhibit Erwinia amylovora in vitro Appl Environ Microbiol 67 284 292 11133457 10.1128/AEM.67.1.284-292.2001 1:CAS:528:DC%2BD3MXjtVWnuw%3D%3D (Pubitemid 32044430)