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Volumn 48, Issue 3, 2011, Pages 218-227

A new method for repeated "self-Cloning" promoter replacement in Saccharomyces cerevisiae

Author keywords

PCR; Promoter replacement; Saccharomyces cerevisiae; Self cloning

Indexed keywords

DNA FRAGMENT; HOMOLOGOUS RECOMBINATION; INDUSTRIAL STRAIN; MARKER GENES; NEGATIVE SELECTION; PCR; PROMOTER REPLACEMENT; PROMOTER UPSTREAM; S.CEREVISIAE; SELF-CLONING; TARGET GENES; YEAST SACCHAROMYCES CEREVISIAE;

EID: 80054034892     PISSN: 10736085     EISSN: 15590305     Source Type: Journal    
DOI: 10.1007/s12033-010-9362-6     Document Type: Article
Times cited : (6)

References (39)
  • 1
    • 1242297984 scopus 로고    scopus 로고
    • Manipulation of cloned yeast DNA
    • F. M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, & K. Struhl (Eds.) New York: Wiley
    • Lundblad, V., Hartzog, G., & Moqtaderi, Z. (1997) Manipulation of cloned yeast DNA. In F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, & K. Struhl (Eds.), Current Protocols in Molecular Biology (pp. 13.10.1-13.10.14). New York: Wiley.
    • (1997) Current Protocols in Molecular Biology , pp. 13101-131014
    • Lundblad, V.1    Hartzog, G.2    Moqtaderi, Z.3
  • 2
    • 0032531024 scopus 로고    scopus 로고
    • Functional analysis of yeast essential genes using a promoter- substitution cassette and the tetracycline-regulatable dual expression system
    • DOI 10.1002/(SICI)1097-0061(19980915)14:12<1127::AID-YEA300>3.0. CO;2-#
    • Bellí, G., Garí, E., Aldea, M., & Herrero, E. (1998). Functional analysis of yeast essential genes using a promoter-substitution cassette and the tetracycline-regulatable dual expression system. Yeast, 14, 1127-1138. (Pubitemid 28412716)
    • (1998) Yeast , vol.14 , Issue.12 , pp. 1127-1138
    • Belli, G.1    Gari, E.2    Aldea, M.3    Herrero, E.4
  • 3
    • 70350666262 scopus 로고    scopus 로고
    • A fast and efficient translational control system for conditional expression of yeast genes
    • Kötter, P., Weigand, J. E., Meyer, B., Entian, K. D., & Suess, B. (2009). A fast and efficient translational control system for conditional expression of yeast genes. Nucleic Acids Research, 37, e120.
    • (2009) Nucleic Acids Research , vol.37
    • Kötter, P.1    Weigand, J.E.2    Meyer, B.3    Entian, K.D.4    Suess, B.5
  • 4
    • 4644262700 scopus 로고    scopus 로고
    • Controlled expression of homologous genes by genomic promoter replacement in the yeast Saccharomyces cerevisiae
    • Verstrepen, K. J., & Thevelein, J. M. (2004). Controlled expression of homologous genes by genomic promoter replacement in the yeast Saccharomyces cerevisiae. Methods in Molecular Biology, 267, 259-266.
    • (2004) Methods in Molecular Biology , vol.267 , pp. 259-266
    • Verstrepen, K.J.1    Thevelein, J.M.2
  • 5
    • 0036187741 scopus 로고    scopus 로고
    • Overproduction of pentose phosphate pathway enzymes using a new CRE-loxP expression vector for repeated genomic integration in Saccharomyces cerevisiae
    • DOI 10.1002/yea.833
    • Johansson, B., & Hahn-Hägerdal, B. (2002). Overproduction of pentose phosphate pathway enzymes using a new CRE-loxP expression vector for repeated genomic integration in Saccha-romyces cerevisiae. Yeast, 19, 225-231. (Pubitemid 34189560)
    • (2002) Yeast , vol.19 , Issue.3 , pp. 225-231
    • Johansson, B.1    Hahn-Hagerdal, B.2
  • 8
    • 3843106901 scopus 로고    scopus 로고
    • Construction of a self-cloning sake yeast that overexpresses alcohol acetyltransferase gene by a two-step gene replacement protocol
    • Hirosawa, I., Aritomi, K., Hoshida, H., Kashiwagi, S., Nishizawa, Y., & Akada, R. (2004). Construction of a self-cloning sake yeast that overexpresses alcohol acetyltransferase gene by a two-step gene replacement protocol. Applied Microbiology and Biotechnology, 65, 68-73. (Pubitemid 39044313)
    • (2004) Applied Microbiology and Biotechnology , vol.65 , Issue.1 , pp. 68-73
    • Hirosawa, I.1    Aritomi, K.2    Hoshida, H.3    Kashiwagi, S.4    Nishizawa, Y.5    Akada, R.6
  • 9
    • 0031464418 scopus 로고    scopus 로고
    • Cloning-free PCR-based allele replacement methods
    • Erdeniz, N., Mortensen, U. H., & Rothstein, R. (1997). Cloning-free PCR-based allele replacement methods. Genome Research, 7, 1174-1183. (Pubitemid 28043847)
    • (1997) Genome Research , vol.7 , Issue.12 , pp. 1174-1183
    • Erdeniz, N.1    Mortensen, U.H.2    Rothstein, R.3
  • 10
    • 0028841139 scopus 로고
    • Use of polymerase chain reaction epitope tagging for protein tagging in Saccharomyces cerevisiae
    • Schneider, B. L., Seufert, W., Steiner, B., Yang, Q. H., & Fut-cher, A. B. (1995). Use of polymerase chain reaction epitope tagging for protein tagging in Saccharomyces cerevisiae. Yeast, 11, 1265-1274.
    • (1995) Yeast , vol.11 , pp. 1265-1274
    • Schneider, B.L.1    Seufert, W.2    Steiner, B.3    Yang, Q.H.4    Fut-Cher, A.B.5
  • 12
    • 0036275447 scopus 로고    scopus 로고
    • Getting started with yeast
    • DOI 10.1016/S0076-6879(02)50954-X
    • Sherman, F. (2002). Getting started with yeast. Methods in Enzymology, 350, 3-41. (Pubitemid 34619482)
    • (2002) Methods in Enzymology , vol.350 , pp. 3-41
    • Sherman, F.1
  • 13
    • 0038207634 scopus 로고    scopus 로고
    • Introduction of DNA into yeast cells
    • F. M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, & K. Struhl (Eds.) New York: Wiley
    • Becker, D. M., & Lundblad, V. (1997) Introduction of DNA into yeast cells. In F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, & K. Struhl (Eds.), Current Protocols in Molecular Biology (pp. 13.7.1-13.7.10). New York: Wiley.
    • (1997) Current Protocols in Molecular Biology , pp. 1371-13710
    • Becker, D.M.1    Lundblad, V.2
  • 14
    • 0002004247 scopus 로고    scopus 로고
    • Preparation of yeast DNA
    • F. M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, & K. Struhl (Eds.) New York: Wiley
    • Hoffman, C. S., (1997) Preparation of yeast DNA. In F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidman, J.A. Smith, & K. Struhl (Eds.), Current Protocols in Molecular Biology (pp. 13.11.1-13.11.4). New York: Wiley.
    • (1997) Current Protocols in Molecular Biology , pp. 13111-13114
    • Hoffman, C.S.1
  • 15
    • 0029871347 scopus 로고    scopus 로고
    • PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae
    • DOI 10.1002/(SICI)1097-0061(19960315)12:3<259::AID-YEA901>3.0.CO;2- C
    • Wach, A. (1996). PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast, 12, 259-265. (Pubitemid 26077146)
    • (1996) Yeast , vol.12 , Issue.3 , pp. 259-265
    • Wach, A.1
  • 17
    • 0028953840 scopus 로고
    • Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds
    • Mumberg, D., Müller, R., & Funk, M. (1995). Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene, 156, 119-122.
    • (1995) Gene , vol.156 , pp. 119-122
    • Mumberg, D.1    Müller, R.2    Funk, M.3
  • 18
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DOI 10.1126/science.278.5338.680
    • DeRisi, J. L., Iyer, V. R., & Brown, P. O. (1997). Exploring the metabolic and genetic control of gene expression on a genomic scale. Science, 278, 680-686. (Pubitemid 27464965)
    • (1997) Science , vol.278 , Issue.5338 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 19
    • 0034213671 scopus 로고    scopus 로고
    • Simultaneous genomic overexpression of seven glycolytic enzymes in the yeast Saccharomyces cerevisiae
    • DOI 10.1016/S0141-0229(00)00160-5, PII S0141022900001605
    • Hauf, J., Zimmermann, F. K., & Müller, S. (2000). Simultaneous genomic overexpression of seven glycolytic enzymes in the yeast Saccharomyces cerevisiae. Enyzme and Microbial Technology, 26, 688-698. (Pubitemid 30345535)
    • (2000) Enzyme and Microbial Technology , vol.26 , Issue.9-10 , pp. 688-698
    • Hauf, J.1    Zimmermann, F.K.2    Muller, S.3
  • 20
    • 0021668558 scopus 로고
    • A positive selection for mutants lacking orotidine-5-phosphate decarbox-ylase activity in yeast: 5-fluoro-orotic acid resistance
    • Boeke, J. D., LaCroute, F., & Fink, G. R. (1984). A positive selection for mutants lacking orotidine-5-phosphate decarbox-ylase activity in yeast: 5-fluoro-orotic acid resistance. Molecular and General Genetics, 197, 345-346.
    • (1984) Molecular and General Genetics , vol.197 , pp. 345-346
    • Boeke, J.D.1    Lacroute, F.2    Fink, G.R.3
  • 21
    • 0023484186 scopus 로고
    • 5-Fluoroorotic acid as a selective agent in yeast molecular genetics
    • Boeke, J. D., Trueheart, J., Natsoulis, G., & Fink, G. R. (1987). 5-Fluoroorotic acid as a selective agent in yeast molecular genetics. Methods in Enzymology, 154, 164-175.
    • (1987) Methods in Enzymology , vol.154 , pp. 164-175
    • Boeke, J.D.1    Trueheart, J.2    Natsoulis, G.3    Fink, G.R.4
  • 22
    • 0023392267 scopus 로고
    • A method for gene disruption that allows repeated use of URA3 selection in the construction ofmultiply disrupted yeast strains
    • Alani, E., Cao, L., & Kleckner, N. (1987). A method for gene disruption that allows repeated use of URA3 selection in the construction ofmultiply disrupted yeast strains. Genetics, 116, 541-545.
    • (1987) Genetics , vol.116 , pp. 541-545
    • Alani, E.1    Cao, L.2    Kleckner, N.3
  • 23
    • 0029096027 scopus 로고
    • A method for performing precise alterations in the yeast genome using a recyclable selectable marker
    • Längle-Rouault, F., & Jacobs, E. (1995). A method for performing precise alterations in the yeast genome using a recyclable selectable marker. Nucleic Acids Research, 23, 3079-3081.
    • (1995) Nucleic Acids Research , vol.23 , pp. 3079-3081
    • Längle-Rouault, F.1    Jacobs, E.2
  • 24
    • 33646373653 scopus 로고    scopus 로고
    • PCR-mediated seamless gene deletion and marker recycling in Saccharomyces cerevisiae
    • Akada, R., Kitagawa, T., Kaneko, S., Toyonaga, D., Ito, S., Kakihara, Y., et al. (2006). PCR-mediated seamless gene deletion and marker recycling in Saccharomyces cerevisiae. Yeast, 23, 399-405.
    • (2006) Yeast , vol.23 , pp. 399-405
    • Akada, R.1    Kitagawa, T.2    Kaneko, S.3    Toyonaga, D.4    Ito, S.5    Kakihara, Y.6
  • 25
    • 0025278472 scopus 로고
    • Genetic and biochemical analysis of glutathione-deficient mutants of Saccharomyces cerevisiae
    • Kistler, M., Maier, K., & Eckardt-Schupp, F. (1990). Genetic and biochemical analysis of glutathione-deficient mutants of Saccharomyces cerevisiae. Mutagenesis, 5, 39-44. (Pubitemid 20102067)
    • (1990) Mutagenesis , vol.5 , Issue.1 , pp. 39-44
    • Kistler, M.1    Maier, K.2    Eckardt-Schupp, F.3
  • 26
    • 0026338492 scopus 로고
    • Molecular cloning of the gamma-glutamylcysteine synthetase gene of Saccharomyces cerevisiae
    • Ohtake, Y., & Yabuuchi, S. (1991). Molecular cloning of the gamma-glutamylcysteine synthetase gene of Saccharomyces cerevisiae. Yeast, 7, 953-961.
    • (1991) Yeast , vol.7 , pp. 953-961
    • Ohtake, Y.1    Yabuuchi, S.2
  • 27
    • 0001630848 scopus 로고
    • Isolation and characterization of glutathione biosynthesis-deficient mutants in Saccharomyces cerevisiae
    • Ohtake, Y., Satou, A., & Yabuuchi, S. (1990). Isolation and characterization of glutathione biosynthesis-deficient mutants in Saccharomyces cerevisiae. Agricultural and Biological Chemistry, 54, 3145-3150.
    • (1990) Agricultural and Biological Chemistry , vol.54 , pp. 3145-3150
    • Ohtake, Y.1    Satou, A.2    Yabuuchi, S.3
  • 28
    • 0030747207 scopus 로고    scopus 로고
    • Glutathione synthetase is dispensable for growth under both normal and oxidative stress conditions in the yeast Saccharomyces cerevisiae due to an accumulation of the dipeptide γ-glutamylcysteine
    • Grant, C. M., MacIver, F. H., & Dawes, I. W. (1997). Glutathione synthetase is dispensable for growth under both normal and oxidative stress conditions in the yeast Saccharomyces cerevisiae due to an accumulation of the dipeptide gamma-glutamylcys-teine. Molecular Biology of the Cell, 8, 1699-1707. (Pubitemid 27411135)
    • (1997) Molecular Biology of the Cell , vol.8 , Issue.9 , pp. 1699-1707
    • Grant, C.M.1    MacIver, F.H.2    Dawes, I.W.3
  • 29
    • 0032506937 scopus 로고    scopus 로고
    • Molecular identification of glutathione synthetase (GSH2) gene from Saccharomyces cerevisiae
    • DOI 10.1016/S0167-4781(97)00199-1, PII S0167478197001991
    • Inoue, Y., Sugiyama, K., Izawa, S., & Kimura, A. (1998). Molecular identification of glutathione synthetase (GSH2) gene from Saccharomyces cerevisiae. Biochimica et Biophysica Acta, 1395, 315-320. (Pubitemid 28116539)
    • (1998) Biochimica et Biophysica Acta - Gene Structure and Expression , vol.1395 , Issue.3 , pp. 315-320
    • Inoue, Y.1    Sugiyama, K.-I.2    Izawa, S.3    Kimura, A.4
  • 30
    • 0027237665 scopus 로고
    • A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae
    • Baudin, A., Ozier-Kalogeropoulos, O., Denouel, A., Lacroute, F., & Cullin, C. (1993). A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae. Nucleic Acids Research, 21, 3329-3330. (Pubitemid 23230516)
    • (1993) Nucleic Acids Research , vol.21 , Issue.14 , pp. 3329-3330
    • Baudin, A.1    Ozier-Kalogeropoulos, O.2    Denouel, A.3    Lacroute, F.4    Cullin, C.5
  • 31
    • 0028358919 scopus 로고
    • Recycling selectable markers in yeast
    • Sauer, B. (1994). Recycling selectable markers in yeast. Bio-techniques, 16, 1086-1088. (Pubitemid 24184634)
    • (1994) BioTechniques , vol.16 , Issue.6 , pp. 1086-1088
    • Sauer, B.1
  • 32
    • 0027192868 scopus 로고
    • Isogenic strain construction and gene mapping in Candida albicans
    • Fonzi, W. A., & Irwin, M. Y. (1993). Isogenic strain construction and gene mapping in Candida albicans. Genetics, 134, 717-728. (Pubitemid 23193572)
    • (1993) Genetics , vol.134 , Issue.3 , pp. 717-728
    • Fonzi, W.A.1    Irwin, M.Y.2
  • 35
    • 0037088811 scopus 로고    scopus 로고
    • A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast
    • Gueldener, U., Heinisch, J., Koehler, G. J., Voss, D., & Hege-mann, J. H. (2002). A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast. Nucleic Acids Research, 30, e23.
    • (2002) Nucleic Acids Research , vol.30
    • Gueldener, U.1    Heinisch, J.2    Koehler, G.J.3    Voss, D.4    Hege-Mann, J.H.5
  • 36
    • 0025351710 scopus 로고
    • Genetic analysis of amdS transformants of Aspergillus niger and their use in chromosome mapping
    • DOI 10.1007/BF00633830
    • Debets, A. J., Swart, K., Holub, E. F., Goosen, T., & Bos, C. J. (1990). Genetic analysis of amdS transformants of Aspergillus niger and their use in chromosome mapping. Molecular and General Genetics, 222, 284-290. (Pubitemid 20240154)
    • (1990) Molecular and General Genetics , vol.222 , Issue.2-3 , pp. 284-290
    • Debets, A.J.M.1    Swart, K.2    Holub, E.F.3    Goosen, T.4    Bos, C.J.5
  • 37
    • 0035734619 scopus 로고    scopus 로고
    • Modulating the distribution of fluxes among respiration and fermentation by overexpression of HAP4 in Saccharomyces cerevisiae
    • DOI 10.1016/S1567-1356(01)00022-8, PII S1567135601000228
    • Van Maris, A. J., Bakker, B. M., Brandt, M., Boorsma, A., Teixeira de Mattos, M. J., Grivell, L. A., et al. (2001). Modulating the distribution of fluxes among respiration and fermentation by overexpression of HAP4 in Saccharomyces cerevisiae. FEMS Yeast Research, 1, 139-149. (Pubitemid 34442283)
    • (2001) FEMS Yeast Research , vol.1 , Issue.2 , pp. 139-149
    • Van Maris, A.J.A.1    Bakker, B.M.2    Brandt, M.3    Boorsma, A.4    Teixeira De Mattos, M.J.5    Grivell, L.A.6    Pronk, J.T.7    Blom, J.8
  • 38
    • 34548254386 scopus 로고    scopus 로고
    • Acetamide selection of Kluyveromyces lactis cells transformed with an integrative vector leads to high-frequency formation of multicopy strains
    • DOI 10.1128/AEM.02253-06
    • Read, J. D., Colussi, P. A., Ganatra, M. B., & Taron, C. H. (2007). Acetamide selection of Kluyveromyces lactis cells transformed with an integrative vector leads to high-frequency formation of multicopy strains. Applied and Environmental Microbiology, 73, 5088-5096. (Pubitemid 47326637)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.16 , pp. 5088-5096
    • Read, J.D.1    Colussi, P.A.2    Ganatra, M.B.3    Taron, C.H.4
  • 39
    • 0037196945 scopus 로고    scopus 로고
    • Sets of integrating plasmids and gene disruption cassettes containing improved counter-selection markers designed for repeated use in budding yeast
    • DOI 10.1002/yea.841
    • Akada, R., Hirosawa, I., Kawahata, M., Hoshida, H., & Nishizawa, Y. (2002). Sets of integrating plasmids and gene disruption cassettes containing improved counter-selection markers designed for repeated use in budding yeast. Yeast, 19, 393-402. (Pubitemid 34284882)
    • (2002) Yeast , vol.19 , Issue.5 , pp. 393-402
    • Akada, R.1    Hirosawa, I.2    Kawahata, M.3    Hoshida, H.4    Nishizawa, Y.5


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