-
1
-
-
0037158810
-
Human members of the eukaryotic protein kinase family
-
Kostich M, English J, Madison V, Gheyas F, Wang L, Qiu P, Greene J, Laz T. Human members of the eukaryotic protein kinase family. Genome Biology 2002, 3(9).
-
(2002)
Genome Biology
, vol.3
, Issue.9
-
-
Kostich, M.1
English, J.2
Madison, V.3
Gheyas, F.4
Wang, L.5
Qiu, P.6
Greene, J.7
Laz, T.8
-
3
-
-
79952383482
-
Kinase profiling: The mysteries unraveled
-
Pelech S. Kinase profiling: The mysteries unraveled. Future Pharmaceuticals 2006, 1:23-25.
-
(2006)
Future Pharmaceuticals
, vol.1
, pp. 23-25
-
-
Pelech, S.1
-
4
-
-
34247888862
-
Dimerization in protein kinase signaling
-
1414068, 16515716
-
Pelech S. Dimerization in protein kinase signaling. Journal of Biology 2006, 5(12):1-7. 1414068, 16515716.
-
(2006)
Journal of Biology
, vol.5
, Issue.12
, pp. 1-7
-
-
Pelech, S.1
-
5
-
-
34250743173
-
Systematic discovery of in vivo phosphorylation networks
-
10.1016/j.cell.2007.05.052, 2692296, 17570479
-
Linding R, Jensen LJJ, Ostheimer GJ, van Vugt MA, Jørgensen C, Miron IM, Diella F, Colwill K, Taylor L, Elder K, Metalnikov P, Nguyen V, Pasculescu A, Jin J, Park JGG, Samson LD, Woodgett JR, Russell RB, Bork P, Yaffe MB, Pawson T. Systematic discovery of in vivo phosphorylation networks. Cell 2007, 129(7):1415-1426. 10.1016/j.cell.2007.05.052, 2692296, 17570479.
-
(2007)
Cell
, vol.129
, Issue.7
, pp. 1415-1426
-
-
Linding, R.1
Jensen, L.J.J.2
Ostheimer, G.J.3
van Vugt, M.A.4
Jørgensen, C.5
Miron, I.M.6
Diella, F.7
Colwill, K.8
Taylor, L.9
Elder, K.10
Metalnikov, P.11
Nguyen, V.12
Pasculescu, A.13
Jin, J.14
Park, J.G.G.15
Samson, L.D.16
Woodgett, J.R.17
Russell, R.B.18
Bork, P.19
Yaffe, M.B.20
Pawson, T.21
more..
-
6
-
-
84860731574
-
-
http://www.phosphonet.ca
-
-
-
-
7
-
-
44849086809
-
Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites
-
10.1186/1471-2105-9-245, 2412879, 18501020
-
Saunders NFW, Brinkworth RI, Huber T, Kemp BE, Kobe B. Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites. BMC Bioinformatics 2008, 9:245+. 10.1186/1471-2105-9-245, 2412879, 18501020.
-
(2008)
BMC Bioinformatics
, vol.9
-
-
Saunders, N.F.W.1
Brinkworth, R.I.2
Huber, T.3
Kemp, B.E.4
Kobe, B.5
-
8
-
-
0042622251
-
Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs
-
10.1093/nar/gkg584, 168990, 12824383
-
Obenauer JC, Cantley LC, Yaffe MB. Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs. Nucleic acids research 2003, 31(13):3635-3641. 10.1093/nar/gkg584, 168990, 12824383.
-
(2003)
Nucleic acids research
, vol.31
, Issue.13
, pp. 3635-3641
-
-
Obenauer, J.C.1
Cantley, L.C.2
Yaffe, M.B.3
-
9
-
-
0033579464
-
Sequence and structure-based prediction of eukaryotic protein phosphorylation sites
-
10.1006/jmbi.1999.3310, 10600390
-
Blom N, Gammeltoft S, Brunak S. Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. Journal of Molecular Biology 1999, 294(5):1351-1362. 10.1006/jmbi.1999.3310, 10600390.
-
(1999)
Journal of Molecular Biology
, vol.294
, Issue.5
, pp. 1351-1362
-
-
Blom, N.1
Gammeltoft, S.2
Brunak, S.3
-
10
-
-
8844219516
-
Prediction of phosphorylation sites using SVMs
-
10.1093/bioinformatics/bth382, 15231530
-
Kim JH, Lee J, Oh B, Kimm K, Koh I. Prediction of phosphorylation sites using SVMs. Bioinformatics 2004, 20(17):3179-3184. 10.1093/bioinformatics/bth382, 15231530.
-
(2004)
Bioinformatics
, vol.20
, Issue.17
, pp. 3179-3184
-
-
Kim, J.H.1
Lee, J.2
Oh, B.3
Kimm, K.4
Koh, I.5
-
11
-
-
57249105125
-
Prediction of kinase-specific phosphorylation sites using conditional random fields
-
Dang THH, Van Leemput K, Verschoren A, Laukens K. Prediction of kinase-specific phosphorylation sites using conditional random fields. Bioinformatics (Oxford, England) 2008, 24(24):2857-2864.
-
(2008)
Bioinformatics (Oxford, England)
, vol.24
, Issue.24
, pp. 2857-2864
-
-
Dang, T.H.H.1
Van Leemput, K.2
Verschoren, A.3
Laukens, K.4
-
12
-
-
40249113353
-
Meta-prediction of phosphorylation sites with weighted voting and restricted grid search parameter selection
-
Wan J, Kang S, Tang C, Yan J, Ren Y, Liu J, Gao X, Banerjee A, Ellis LB, Li T. Meta-prediction of phosphorylation sites with weighted voting and restricted grid search parameter selection. Nucleic acids research 2008, 36(4).
-
(2008)
Nucleic acids research
, vol.36
, Issue.4
-
-
Wan, J.1
Kang, S.2
Tang, C.3
Yan, J.4
Ren, Y.5
Liu, J.6
Gao, X.7
Banerjee, A.8
Ellis, L.B.9
Li, T.10
-
14
-
-
55749111058
-
Linear motif atlas for phosphorylation-dependent signaling
-
Miller MLL, Jensen LJJ, Diella F, Jørgensen C, Tinti M, Li L, Hsiung M, Parker SA, Bordeaux J, Sicheritz-Ponten T, Olhovsky M, Pasculescu A, Alexander J, Knapp S, Blom N, Bork P, Li S, Cesareni G, Pawson T, Turk BE, Yaffe MB, Brunak S, Linding R. Linear motif atlas for phosphorylation-dependent signaling. Science signaling 2008, 1(35):ra2+.
-
(2008)
Science signaling
, vol.1
, Issue.35
-
-
Miller, M.L.L.1
Jensen, L.J.J.2
Diella, F.3
Jørgensen, C.4
Tinti, M.5
Li, L.6
Hsiung, M.7
Parker, S.A.8
Bordeaux, J.9
Sicheritz-Ponten, T.10
Olhovsky, M.11
Pasculescu, A.12
Alexander, J.13
Knapp, S.14
Blom, N.15
Bork, P.16
Li, S.17
Cesareni, G.18
Pawson, T.19
Turk, B.E.20
Yaffe, M.B.21
Brunak, S.22
Linding, R.23
more..
-
15
-
-
58149193234
-
STRING 8-a global view on proteins and their functional interactions in 630 organisms
-
Database issue, 2686466, 18940858
-
Jensen LJ, Kuhn M, Stark M, Chaffron S, Creevey C, Muller J, Doerks T, Julien P, Roth A, Simonovic M, Bork P, von Mering C. STRING 8-a global view on proteins and their functional interactions in 630 organisms. Nucleic acids research 2009, 37(Database issue):D412-416. 2686466, 18940858.
-
(2009)
Nucleic acids research
, vol.37
-
-
Jensen, L.J.1
Kuhn, M.2
Stark, M.3
Chaffron, S.4
Creevey, C.5
Muller, J.6
Doerks, T.7
Julien, P.8
Roth, A.9
Simonovic, M.10
Bork, P.11
von Mering, C.12
-
16
-
-
84860747217
-
-
http://www.phosphosite.org
-
-
-
-
17
-
-
78651320816
-
Phospho.ELM: a database of phosphorylation sites-update 2011
-
3013696, 21062810
-
Dinkel H, Chica C, Via A, Gould CM, Jensen LJ, Gibson TJ, Diella F. Phospho.ELM: a database of phosphorylation sites-update 2011. Nucleic Acids Research 2011, 39(suppl 1):D261-D267. 3013696, 21062810.
-
(2011)
Nucleic Acids Research
, vol.39
, Issue.SUPPL. 1
-
-
Dinkel, H.1
Chica, C.2
Via, A.3
Gould, C.M.4
Jensen, L.J.5
Gibson, T.J.6
Diella, F.7
-
19
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
10.1093/bioinformatics/btm404, 17846036
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG. Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23(21):2947-2948. 10.1093/bioinformatics/btm404, 17846036.
-
(2007)
Bioinformatics
, vol.23
, Issue.21
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
20
-
-
84889281816
-
Elements of Information Theory 2nd Edition
-
Wiley-Interscience, 2
-
Cover TM, Thomas JA. Elements of Information Theory 2nd Edition. 2006, Wiley-Interscience, 2.
-
(2006)
-
-
Cover, T.M.1
Thomas, J.A.2
-
21
-
-
79952401023
-
Prediction of human protein kinase substrate specificities
-
Safaei J, Manuch J, Gupta A, Stacho L, Pelech S. Prediction of human protein kinase substrate specificities. BIBM 2010, 259-264.
-
(2010)
BIBM
, pp. 259-264
-
-
Safaei, J.1
Manuch, J.2
Gupta, A.3
Stacho, L.4
Pelech, S.5
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