The localization of Tic20 proteins in Arabidopsis thaliana is not restricted to the inner envelope membrane of chloroplasts

Plant Molecular Biology

Volumn 77, Issue 4-5, 2011, Pages 381-390

  Machettira, Anu B ^a   Gross, Lucia E ^a   Sommer, Maik S ^a   Weis, Benjamin L ^a   Englich, Gisela ^a   Tripp, Joanna ^a   Schleiff, Enrico ^a  

^a GOETHE UNIVERSITY   (Germany)

Author keywords

Chloroplast protein import; Membrane protein topology; Tic20

Indexed keywords

ARABIDOPSIS PROTEIN; CARRIER PROTEIN; ISOPROTEIN; TIC20 PROTEIN, ARABIDOPSIS;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CELL FRACTIONATION; CHEMISTRY; CHLOROPLAST; INTRACELLULAR MEMBRANE; METABOLISM; MOLECULAR GENETICS; SEQUENCE ALIGNMENT; ULTRASTRUCTURE;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL FRACTIONATION; CHLOROPLASTS; INTRACELLULAR MEMBRANES; MEMBRANE TRANSPORT PROTEINS; MOLECULAR SEQUENCE DATA; PROTEIN ISOFORMS; SEQUENCE ALIGNMENT;

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA;

EID: 80054026313     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-011-9818-5     Document Type: Article

References (36)

1. Bionda T, Tillmann B, Simm S, Beilstein K, Ruprecht M, Schleiff E (2010) Chloroplast import signals: the length requirement for translocation in vitro and in vivo. J Mol Biol 402: 510-523.
2. Bullmann L, Haarmann R, Mirus O, Bredemeier R, Hempel F, Maier UG, Schleiff E (2010) Filling the gap, evolutionarily conserved Omp85 in plastids of chromalveolates. J Biol Chem 285: 6848-6856.
3. Cabantous S, Terwilliger TC, Waldo GS (2005) Protein tagging and detection with engineered self-assembling fragments of green fluorescent protein. Nat Biotechnol 23: 102-107.
4. Chen X, Smith MD, Fitzpatrick L, Schnell DJ (2002) In vivo analysis of the role of atTic20 in protein import into chloroplasts. Plant Cell 14: 641-654.
5. Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol 300: 1005-1016.
6. Friso G, Giacomelli L, Ytterberg AJ, Peltier JB, Rudella A, Sun Q, Wijk KJ (2004) In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Plant Cell 16: 478-499.
7. Heins L, Mehrle A, Hemmler R, Wagner R, Kuchler M, Hormann F, Sveshnikov D, Soll J (2002) The preprotein conducting channel at the inner envelope membrane of plastids. EMBO J 21: 2616-2625.
8. Hirabayashi Y, Kikuchi S, Oishi M, Nakai M (2011) In vivo studies on the roles of two closely related Arabidopsis Tic20 proteins, AtTic20-I and AtTic20-IV. Plant Cell Physiol.
9. Inaba T, Alvarez-Huerta M, Li M, Bauer J, Ewers C, Kessler F, Schnell DJ (2005) Arabidopsis tic110 is essential for the assembly and function of the protein import machinery of plastids. Plant Cell 17: 1482-1496.
10. Kalanon M, McFadden GI (2008) The chloroplast protein translocation complexes of Chlamydomonas reinhardtii: a bioinformatic comparison of Toc and Tic components in plants, green algae and red algae. Genetics 179: 95-112.
11. Kasmati AR, Topel M, Patel R, Murtaza G, Jarvis P (2011) Molecular and genetic analyses of Tic20 homologues in Arabidopsis thaliana chloroplasts. Plant J 66: 877-889.
12. Katoh K, Toh H (2008) Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinf 9: 286-298.
13. Kessler F, Schnell D (2009) Chloroplast biogenesis: diversity and regulation of the protein import apparatus. Curr Opin Cell Biol 21: 494-500.
14. Kikuchi S, Oishi M, Hirabayashi Y, Lee DW, Hwang I, Nakai M (2009) A 1-megadalton translocation complex containing Tic20 and Tic21 mediates chloroplast protein import at the inner envelope membrane. Plant Cell 21: 1781-1797.
15. Kleffmann T, Russenberger D, von Zychlinski A, Christopher W, Sjolander K, Gruissem W, Baginsky S (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-362.
16. Kobayashi K, Nakamura Y, Ohta H (2009) Type A and type B monogalactosyldiacylglycerol synthases are spatially and functionally separated in the plastids of higher plants. Plant Physiol Biochem 47: 518-525.
17. Kouranov A, Schnell DJ (1997) Analysis of the interactions of preproteins with the import machinery over the course of protein import into chloroplasts. J Cell Biol 139: 1677-1685.
18. Kouranov A, Chen X, Fuks B, Schnell DJ (1998) Tic20 and Tic22 are new components of the protein import apparatus at the chloroplast inner envelope membrane. J Cell Biol 143: 991-1002.
19. Kouranov A, Wang H, Schnell DJ (1999) Tic22 is targeted to the intermembrane space of chloroplasts by a novel pathway. J Biol Chem 274: 25181-25186.
20. Li W, Godzik A (2006) Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22: 1658-1659.
21. Li M, Schnell DJ (2006) Reconstitution of protein targeting to the inner envelope membrane of chloroplasts. J Cell Biol 175: 249-259.
22. Lübeck J, Heins L, Soll J (1997) A nuclear-coded chloroplastic inner envelope membrane protein uses a soluble sorting intermediate upon import into the organelle. J Cell Biol 137: 1279-1286.
23. Lyck R, Harmening U, Hohfeld I, Treuter E, Scharf KD, Nover L (1997) Intracellular distribution and identification of the nuclear localization signals of two plant heat-stress transcription factors. Planta 202: 117-125.
24. Millar AH, Carrie C, Pogson B, Whelan J (2009) Exploring the function-location nexus: using multiple lines of evidence in defining the subcellular location of plant proteins. Plant Cell 21: 1625-1631.
25. Mishra SK, Tripp J, Winkelhaus S, Tschiersch B, Theres K, Nover L, Scharf KD (2002) In the complex family of heat stress transcription factors, HsfA1 has a unique role as master regulator of thermotolerance in tomato. Genes Dev 16: 1555-1567.
26. Reumann S, Keegstra K (1999) The endosymbiotic origin of the protein import machinery of chloroplastic envelope membranes. Trends Plant Sci 4: 302-307.
27. Schleiff E, Becker T (2011) Common ground for protein translocation: access control for mitochondria and chloroplasts. Nat Rev Mol Cell Biol 12: 48-59.
28. Schleiff E, Tien R, Salomon M, Soll J (2001) Lipid composition of outer leaflet of chloroplast outer envelope determines topology of OEP7. Mol Biol Cell 12: 4090-4102.
29. Schwacke R, Schneider A, van der Graaff E, Fischer K, Catoni E, Desimone M, Frommer WB, Flugge UI, Kunze R (2003) ARAMEMNON, a novel database for Arabidopsis integral membrane proteins. Plant Physiol 131: 16-26.
30. Tranel PJ, Froehlich J, Goyal A, Keegstra K (1995) A component of the chloroplastic protein import apparatus is targeted to the outer envelope membrane via a novel pathway. EMBO J 14: 2436-2446.
31. Tripp J, Inoue K, Keegstra K, Froehlich JE (2007) A novel serine/proline-rich domain in combination with a transmembrane domain is required for the insertion of AtTic40 into the inner envelope membrane of chloroplasts. Plant J 52: 824-838.
32. Tusnády GE, Simon I (2001) The HMMTOP transmembrane topology prediction server. Bioinformatics 17: 849-850.
33. van Dooren GG, Tomova C, Agrawal S, Humbel BM, Striepen B (2008) Toxoplasma gondii Tic20 is essential for apicoplast protein import. Proc Natl Acad Sci USA 105: 13574-13579.
34. von Arnim AG, Deng XW, Stacey MG (1998) Cloning vectors for the expression of green fluorescent protein fusion proteins in transgenic plants. Gene 221: 35-43.
35. von Heijne G, Gavel Y (1988) Topogenic signals in integral membrane proteins. Eur J Biochem 174: 671-678.
36. Zimmermann P, Hirsch-Hoffmann M, Hennig L, Gruissem W (2004) GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol 136: 2621-2632.