Asanoa hainanensis sp. nov., isolated from rhizosphere soil of acrostichum speciosum in a mangrove, and emended description of the genus Asanoa

International Journal of Systematic and Evolutionary Microbiology

Volumn 61, Issue 10, 2011, Pages 2384-2388

  Xu, Xiao Xiong ^a   Qu, Zhi ^a   Wang, Hailong ^b   Lin, Hai Peng ^a   Wang, Cheng ^a   Xie, Qing Yi ^a   Ruan, Ji Sheng ^a   Hong, Kui ^a  

^a INSTITUTE OF TROPICAL BIOSCIENCE AND BIOTECHNOLOGY   (China)

^b FUJIAN INSTITUTE OF MICROBIOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; DNA; DOUBLE STRANDED DNA; FATTY ACID; GLUCOSAMINE; GLUCOSE; GLUTAMIC ACID; GLYCINE; MANNOSE; MANNOSIDE; MENAQUINONE; PEPTIDOGLYCAN; PHOSPHATIDYLETHANOLAMINE; RIBOSE; RIBOSOME RNA; RNA 16S; XYLOSE;

ARTICLE; ASANOA HAINANENSIS; BACTERIAL STRAIN; BACTERIUM ISOLATION; GENE SEQUENCE; GENOTYPE; MANGROVE; MICROMONOSPORACEAE; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; RHIZOSPHERE;

AMINO ACIDS; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CARBOHYDRATES; CELL WALL; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; MICROMONOSPORACEAE; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHOSPHOLIPIDS; PHYLOGENY; PTERIDACEAE; RHIZOSPHERE; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; VITAMIN K 2;

ACROSTICHUM; ASANOA; BACTERIA (MICROORGANISMS); FILICOPHYTA;

EID: 80053931284     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.025825-0     Document Type: Article

References (35)

1. Arai, T. (1975). Culture Media for Actinomycetes. Tokyo: The Society for Actinomycetes Japan.
2. Asano, K. & Kawamoto, I. (1986). Catellatospora, a new genus of the Actinomycetales. Int J Syst Bacteriol 36, 512-517.
3. Castiglione, F., Lazzarini, A., Carrano, L., Corti, E., Ciciliato, I., Gastaldo, L., Candiani, P., Losi, D., Marinelli, F. & other authors (2008). Determining the structure and mode of action of microbisporicin, a potent lantibiotic active against multiresistant pathogens. Chem Biol 15, 22-31.
4. Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
5. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
6. Goodfellow, M., Kumar, Y., Labeda, D. P. & Sembiring, L. (2007). The Streptomyces violaceusniger clade: a home for streptomycetes with rugose ornamented spores. Antonie van Leeuwenhoek 92, 173-199.
7. Hatano, K. (1997). Actinomycete populations in mangrove rhizospheres. Inst Ferment Osaka Res Commun 18, 26-31.
8. Hong, K., Gao, A. H., Xie, Q. Y., Gao, H., Zhuang, L., Lin, H. P., Yu, H. P., Li, J., Yao, X. S. & other authors (2009). Actinomycetes for marine drug discovery isolated from mangrove soils and plants in China. Mar Drugs 7, 24-44.
9. Janssen, P. H., Yates, P. S., Grinton, B. E., Taylor, P. M. & Sait, M. (2002). Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl Environ Microbiol 68, 2391-2396.
10. Kelly, K. L. (1964). Inter-Society Color Council - National Bureau of Standards Color Name Charts Illustrated with Centroid Colors. Washington, DC: US Government Printing Office.
11. King, L. & Hurst, A. (1963). A note on the survival of some bacteria in different diluents. J Appl Microbiol 26, 504-506.
12. Kluge, A. G. & Farris, J. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
13. Kroppenstedt, R. M. (1985). Fatty acid and menaquinone analysis of actinomycetes and related organisms. In Chemical Methods in Bacterial Systematics, pp. 173-199. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
14. Lechevalier, M. P. & Lechevalier, H. A. (1980). The chemotaxonomy of actinomycetes. In Actinomycete Taxonomy (Special Publication no. 6), pp. 227-291. Edited by A. Dietz & J. Thayer. Arlington, VA: Society for Industrial Microbiology.
15. Lechevalier, M. P., De Bie vre, C. & Lechevalier, H. A. (1977). Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249-260.
16. Lee, S. D. & Hah, Y. C. (2002). Proposal to transfer Catellatospora ferruginea and 'Catellatospora ishikariense' to Asanoa gen. nov. as Asanoa ferruginea comb. nov. and Asanoa ishikariensis sp. nov., with emended description of the genus Catellatospora. Int J Syst Evol Microbiol 52, 967-972.
17. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
18. Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241.
19. Oliver, J. D. & Colwell, R. R. (1973). Extractable lipids of Gramnegative marine bacteria: fatty-acid composition. Int J Syst Bacteriol 23, 442-458.
20. Pospiech, A. & Neumann, B. (1995). A versatile quick-prep of genomic DNA from Gram-positive bacteria. Trends Genet 11, 217-218.
21. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
22. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 101. Newark, DE: MIDI Inc.
23. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
24. Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
25. Takahashi, Y., Matsumoto, A., Seino, A., Iwai, Y. & Omura, S. (1996). Rare actinomycetes isolated from desert soils. Actinomycetologica 10, 91-97.
26. Takeuchi, M. & Hatano, K. (1998). Gordonia rhizosphera sp. nov. isolated from the mangrove rhizosphere. Int J Syst Bacteriol 48, 907-912.
27. Takeuchi, M. & Hatano, K. (1999). Phylogenetic analysis of actinobacteria in the mangrove rhizosphere. Inst Ferment Osaka Res Commun 19, 47-62.
28. Tamura, T. & Sakane, T. (2005). Asanoa iriomotensis sp. nov., isolated from mangrove soil. Int J Syst Evol Microbiol 55, 725-727.
29. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
30. Uchida, K. & Aida, K. (1984). An improved method for the glycolate test for simple identification of acyl type of bacterial cell walls. J Gen Appl Microbiol 30, 131-134.
31. Wang, C., Xu, X.-X., Qu, Z., Wang, H.-L., Lin, H.-P., Xie, Q.-Y., Ruan, J.-S. & Hong, K. (2011). Micromonospora rhizosphaerae sp. nov., isolated from mangrove rhizosphere soil. Int J Syst Evol Microbiol 61, 320-324.
32. Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. &other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
33. Wellington, E. M. H. & Williams, S. T. (1978). Preservation of actinomycete inoculum in frozen glycerol. Microbios Lett 6, 151-157.
34. Williams, S. T. & Cross, T. (1971). Actinomycetes. In Methods in Microbiology, vol. 4, pp. 295-334. Edited by C. Booth. London: Academic Press.
35. Williams, S. T., Goodfellow, M., Alderson, G., Wellington, E. M. H., Sneath, P. H. A. & Sackin, M. J. (1983). Numerical classification of Streptomyces and related genera. J Gen Microbiol 129, 1743-1813.