Control of proteobacterial central carbon metabolism by the HexR transcriptional regulator: A case study in Shewanella oneidensis

Journal of Biological Chemistry

Volumn 286, Issue 41, 2011, Pages 35782-35794

  Leyn, Semen A ^a,b   Li, Xiaoqing ^a   Zheng, Qingxiang ^c   Novichkov, Pavel S ^d   Reed, Samantha ^e   Romine, Margaret F ^e   Fredrickson, James K ^e   Yang, Chen ^c   Osterman, Andrei L ^a   Rodionov, Dmitry A ^a,b  

^a BURNHAM INSTITUTE   (United States)

^b INSTITUTE FOR INFORMATION TRANSMISSION PROBLEMS   (Russian Federation)

^c Shanghai Jiao Tong University Affiliated Sixth People s Hospital   (China)

^d LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^e PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATIC ANALYSIS; CARBON METABOLISM; CATABOLIC PATHWAY; COMPARATIVE GENOMIC; COMPLEX FORMATIONS; DUAL MODES; EXPERIMENTAL ANALYSIS; EXPERIMENTAL DATA; GAMMAPROTEOBACTERIA; GC-MS ANALYSIS; GENE CONTENT; GENE EXPRESSION PATTERNS; GLUCONEOGENIC GENES; IN-VITRO; MASTER REGULATORS; METABOLIC FLUX ANALYSIS; MODEL SYSTEM; MUTANT STRAIN; PHOSPHOENOLPYRUVATES; PROTEOBACTERIA; PYRUVATES; REGULATORY NETWORK; SHEWANELLA ONEIDENSIS; SYNTHASES; TRANSCRIPTIONAL ACTIVATIONS; TRANSCRIPTIONAL FACTORS; TRANSCRIPTIONAL REGULATOR; WILD TYPES;

ACTIVATION ANALYSIS; BACTERIA; BIOINFORMATICS; CARBON; METABOLISM; PHYSIOLOGY;

GENE EXPRESSION;

ACETATE KINASE; ALCOHOL DEHYDROGENASE; CITRATE SYNTHASE; CYTIDINE DEAMINASE; EPIMERASE; GLYCOGEN PHOSPHORYLASE; LACTATE DEHYDROGENASE; LACTIC ACID; LACTOSE PERMEASE; METHYLGLYOXAL; NICOTINAMIDE ADENINE DINUCLEOTIDE; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE; PYRUVIC ACID; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR HEXR; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; CARBOHYDRATE METABOLISM; CARBON METABOLISM; CARBON SOURCE; CATABOLISM; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; ENTEROBACTERIALES; GENE REPRESSION; GLUCONEOGENESIS; MASS FRAGMENTOGRAPHY; NONHUMAN; OPERON; PHENOTYPE; PHYLOGENY; PREDICTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEOBACTERIA; PSEUDOMONAS PUTIDA; REGULON; SHEWANELLA ONEIDENSIS; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

BACTERIAL PROTEINS; CARBON; GENE EXPRESSION REGULATION, BACTERIAL; GLUCONEOGENESIS; MUTATION; PHOSPHOTRANSFERASES (PAIRED ACCEPTORS); PYRUVIC ACID; RESPONSE ELEMENTS; SHEWANELLA; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

AEROMONADALES; ENTEROBACTERIALES; GAMMAPROTEOBACTERIA; PROTEOBACTERIA; SHEWANELLA ONEIDENSIS;

EID: 80053915498     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.267963     Document Type: Article

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