Genome-wide transcriptional analysis of genes associated with acute desiccation stress in Anopheles gambiae

PLoS ONE

Volumn 6, Issue 10, 2011, Pages

  Wang, Mei Hui ^a   Marinotti, Osvaldo ^a   Vardo Zalik, Anne ^b   Boparai, Rajni ^a   Yan, Guiyun ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

OXYGEN RADICAL; TRANSCRIPTOME; MESSENGER RNA;

ADAPTATION; ANIMAL EXPERIMENT; ANOPHELES GAMBIAE; ARTICLE; CHEMICAL STRESS; CHROMOSOME INVERSION; CONTROLLED STUDY; DESICCATION; DNA REPAIR; FEMALE; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GENOTYPE; INSECT GENOME; MALARIA; METABOLIC RATE; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITE VECTOR; PHENOTYPIC PLASTICITY; PHYSICAL TOLERANCE; SEASON; TRANSCRIPTION REGULATION; ANIMAL; DNA MICROARRAY; GENE; GENE EXPRESSION PROFILING; GENETICS; HUMIDITY; METABOLISM; PHYSIOLOGICAL STRESS; PHYSIOLOGY; REPRODUCIBILITY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SURVIVAL; TIME;

ANOPHELES GAMBIAE;

ANIMALS; ANOPHELES GAMBIAE; CHROMOSOME INVERSION; DESICCATION; FEMALE; GENE EXPRESSION PROFILING; GENES, INSECT; HUMIDITY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; STRESS, PHYSIOLOGICAL; SURVIVAL ANALYSIS; TIME FACTORS; TRANSCRIPTION, GENETIC; TRANSCRIPTOME;

EID: 80053555169     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0026011     Document Type: Article

References (64)

1. World Health Organization (WHO) (2008) World Malaria Report 2008. Geneva World Health Organization.
2. Hamad A, El Hassan I, El Khalifa A, Ahmed G, Abdelrahim S, et al. (2000) Chronic Plasmodium falciparum infections in an area of low intensity malaria transmission in the Sudan. Parasitology 120: 447-456.
3. Paaijmans K, Blanford S, Bell A, Blanford J, Read A, et al. (2010) Influence of climate on malaria transmission depends on daily temperature variation. Proc Natl Acad Sci U S A 107: 15135-15139.
4. Parham P, Michael E, (2010) Modelling climate change and malaria transmission. Adv Exp Med Biol 673: 184-199.
5. Paaijmans K, Read A, Thomas M, (2009) Understanding the link between malaria risk and climate. Proc Natl Acad Sci U S A 106: 13844-13849.
6. Sama W, Owusu-Agyei S, Felger I, Dietz K, Smith T, (2006) Age and seasonal variation in the transition rates and detectability of Plasmodium falciparum malaria. Parasitology 132: 13-21.
7. Coluzzi M, Sabatini A, Petrarca V, Di Deco M, (1979) Chromosomal differentiation and adaptation to human environments in the Anopheles gambiae complex. Trans R Soc Trop Med Hyg 73: 483-497.
8. Charlwood JD, Kihonda J, Sama S, Billingsley PF, Hadji H, et al. (1995) The rise and fall of Anopheles arabiensis (Diptera: Culicidae) in a Tanzanian village. Bull Entomol Res 85: 37-44.
9. Yakob L, Yan G, (2010) A network population model of the dynamics and control of African malaria vectors. Trans R Soc Trop Med Hyg 104: 669-675.
10. Jawara M, Pinder M, Drakeley CJ, Nwakanma DC, Jallow E, et al. (2008) Dry season ecology of Anopheles gambiae complex mosquitoes in The Gambia. Malar J 7: 156.
11. Afrane Y, Zhou G, Lawson B, Githeko A, Yan G, (2006) Effects of microclimatic changes caused by deforestation on the survivorship and reproductive fitness of Anopheles gambiae in western Kenya highlands. Am J Trop Med Hyg 74: 772-778.
12. Lehmann T, Hawley WA, Grebert H, Collins FH, (1998) The effective population size of Anopheles gambiae in Kenya: implications for population structure. Mol Biol Evol 15: 264-276.
13. Midega J, Mbogo C, Mwambi H, Wilson M, Ojwang G, et al. (2007) Estimating dispersal and survival for Anopheles gambiae and Anopheles funestus along the Kenyan Coast using mark-release-recapture methods. J Med Entomol 44: 923-929.
14. Ibrahima B, Keita M, Sogoba N, Konate M, Diallo MB, et al. (2010) Population size and migration of Anopheles gambiae in the Bancoumana Region of Mali and their significance for efficient vector control. PloS One 5: e10270.
15. Charlwood JD, Vij R, Billingsley PF, (2000) Dry season refugia of malaria-transmitting mosquitoes in a dry savannah zone of east Africa Am J Trop Med Hyg 62: 726-732.
16. Omer SM, (1970) Survival of female Anopheles gambiae Giles through a nine-month dry season in Sudan. Bull WHO 42: 319-330.
17. Omer SM, Cloudsley-Thompson JL, (1968) Dry season biology of Anopheles gambiae in the Sudan. Nature 217: 879-880.
18. Lehmann T, Dao A, Yaro AS, Adamou A, Kassogue Y, et al. (2010) Aestivation of the African Malaria Mosquito, Anopheles gambiae in the Sahel. Am J Trop Med Hyg 83: 601-606.
19. Gray E, Bradley T, (2005) Physiology of desiccation resistance in Anopheles gambiae and Anopheles arabiensis. Am J Trop Med Hyg 73: 553-559.
20. White B, Cheng C, Sangaré D, Lobo N, Collins F, et al. (2009) The population genomics of trans-specific inversion polymorphisms in Anopheles gambiae. Genetics 183: 275-288.
21. Dobzhansky T, (1970) Genetics of the Evolutionary Process. New York Columbia University Press.
22. Hoffmann A, Sgrò C, Weeks A, (2004) Chromosomal inversion polymorphisms and adaptation. Trends Ecol Evol 19: 482-488.
23. Coluzzi M, Sabatini A, della Torre A, Di Deco M, Tetrarca V, (2002) A Polytene Chromosome Analysis of the Anopheles gambiae Species Complex Science 298: 1415-1418.
24. Xia A, Sharakhova MV, Leman SC, Tu Z, Bailey JA, et al. (2010) Genome landscape and evolutionary plasticity of chromosomes in malaria mosquitoes. PloS One 5: e10592.
25. Sharakhova MV, Xia A, Leman SC, Sharakhov IV, (2011) Arm-specific dynamics of chromosome evolution in malaria mosquitoes. BMC Evolutionary Biology 11: 91.
26. Gray E, Rocca K, Costantini C, Besansky N, (2009) Inversion 2La is associated with enhanced desiccation resistance in Anopheles gambiae. Malar J 8: 215.
27. Mitelman F, Johansson B, Mertens F, (2007) The impact of translocations and gene fusions on cancer causation. Nat Rev Cancer 7: 233-245.
28. Puig M, Caceres M, Ruiz A, (2004) Silencing of a gene adjacent to the breakpoint of a widespread Drosophila inversion by a transposon-induced antisense RNA. Proceedings of the National Academy of Sciences of the United States of America 101: 9013-9018.
29. Perez-Ortin JE, Querol A, Puig S, Barrio E, (2002) Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains. Genome Research 12: 1533-1539.
30. Kirkpatrick M, Barton N, (2006) Chromosome inversions, local adaptation and speciation. Genetics 173: 419-434.
31. Crews-Oyen A, Kumar V, Collins F, (1993) Association of two esterase genes, a chromosomal inversion, and susceptibility to Plasmodium cynomolgi in the African malaria vector Anopheles gambiae. Am J Trop Med Hyg 49: 341-347.
32. Lighton JRB, (1996) Discontinuous gas exchange in insects. Annu Rev Entomol 41: 309-324.
33. Hadley NF, (1979) Wax secretion and color phases of the desert Tenebrionid beetle Cryptoglossa verrucosa (LeConte). Science 203: 367-369.
34. Watanabe M, (2006) Anhydrobiosis in invertebrates. Appl Entomol Zool 41: 15-31.
35. White B, Hahn M, Pombi M, Cassone B, Lobo N, et al. (2007) Localization of candidate regions maintaining a common polymorphic inversion (2La) in Anopheles gambiae. PLoS Genet 3: e217.
36. Willis JH, Iconomidou VA, Smith RF, Hamodrakas SJ, (2005) Cuticular proteins. In: Gilbert LI, Iatrou K, Gill SS, editors. Comprehensive Molecular Insect Science Oxford: Elsevier pp. 79-110.
37. Rebers JE, Riddiford LM, (1988) Structure and expression of a Manduca sexta larval cuticle gene homologous to Drosophila cuticle genes. J Mol Biol 203: 411-423.
38. Ito C, Goto S, Shiga S, Tomioka K, Numata H, (2008) Peripheral circadian clock for the cuticle deposition rhythm in Drosophila melanogaster. Proc Natl Acad Sci U S A 105: 8446-8451.
39. Le Trionnaire G, Francis F, Jaubert-Possamai S, Bonhomme J, De Pauw E, et al. (2009) Transcriptomic and proteomic analyses of seasonal photoperiodism in the pea aphid. BMC Genomics 10: 456.
40. Cortés T, Tagu D, Simon J, Moya A, Martínez-Torres D, (2008) Sex versus parthenogenesis: a transcriptomic approach of photoperiod response in the model aphid Acyrthosiphon pisum (Hemiptera: Aphididae). Genetica 408: 146-156.
41. Le Trionnaire G, Jaubert S, Sabater-Muñoz B, Benedetto A, Bonhomme J, et al. (2007) Seasonal photoperiodism regulates the expression of cuticular and signalling protein genes in the pea aphid. Insect Biochem Mol Biol 37: 1094-1102.
42. Benoit J, Denlinger D, (2007) Suppression of water loss during adult diapause in the northern house mosquito, Culex pipiens. J Exp Biol 210: 217-226.
43. Marinotti O, Calvo E, Nguyen Q, Dissanayake S, Ribeiro J, et al. (2006) Genome-wide analysis of gene expression in adult Anopheles gambiae. Insect Mol Biol 15: 1-12.
44. França M, Panek A, Eleutherio E, (2007) Oxidative stress and its effects during dehydration. Comp Biochem Physiol A Mol Integr Physiol 146: 621-631.
45. Hansen JM, Go YM, Jones DP, (2006) Nuclear and mitochondrial compartmentation of oxidative stress and redox signaling. Annu Rev Pharmacol Toxicol 46: 215-234.
46. Lupu A, Pechkovskaya A, Rashkovetsky E, Nevo E, Korol A, (2004) DNA repair efficiency and thermotolerance in Drosophila melanogaster from "Evolution Canyon". Mutagenesis 19: 383-390.
47. Boubriak I, Kargiolaki H, Lyne L, Osborne D, (1997) The requirement for DNA repair in desiccation tolerance of germinating embryos. Seed Science Research 7: 97-105.
48. Huang Z, Boubriak I, Osborne D, Dong M, Gutterman Y, (2008) Possible role of pectin-containing mucilage and dew in repairing embryo DNA of seeds adapted to desert conditions. Ann Bot 101: 277-283.
49. Boubriak I, Grodzinsky D, Polischuk V, Naumenko V, Gushcha N, et al. (2008) Adaptation and impairment of DNA repair function in pollen of Betula verrucosa and seeds of Oenothera biennis from differently radionuclide-contaminated sites of Chernobyl. Ann Bot 101: 267-276.
50. Mahajan A, Yuan C, Lee H, Chen E, Wu P, et al. (2008) Structure and function of the phosphothreonine-specific FHA domain. Sci Signal 1: re12.
51. Morris E, Chevalier D, Walker J, (2006) DAWDLE, a forkhead-associated domain gene, regulates multiple aspects of plant development. Plant Physiol 141: 932-941.
52. Hoepfner D, Schildknegt D, Braakman I, Philippsen P, Tabak H, (2005) Contribution of the Endoplasmic Reticulum to Peroxisome Formation Cell 122: 85-95.
53. Yoshida H, (2009) ER stress response, peroxisome proliferation, mitochondrial unfolded protein response and Golgi stress response. IUBMB Life 61: 871-879.
54. Benoit JB, Lopez-Martinez G, Phillips ZP, Patrick KR, Denlinger DL, (2010) Heat shock proteins contribute to mosquito dehydration tolerance. Journal of Insect Physiology 56: 151-115.
55. Somvanshi V, Koltai H, Glazer I, (2008) Expression of different desiccation-tolerance related genes in various species of entomopathogenic nematodes. Mol Biochem Parasitol 158: 65-71.
56. Katoh H, Asthana R, Ohmori M, (2004) Gene expression in the cyanobacterium Anabaena sp. PCC7120 under desiccation. Microb Ecol 47: 164-174.
57. Colinet H, Lee S, Hoffmann A, (2009) Temporal expression of heat shock genes during cold stress and recovery from chill coma in adult Drosophila melanogaster. FEBS Journal 277: 174-185.
58. Djawdan M, Chippindale A, Rose M, Bradley T, (1998) Metabolic reserves and evolved stress resistance in Drosophila melanogaster. Physiol Zool 71: 584-594.
59. Toure Y, Petrarca V, Traore S, Coulibaly A, Maiga H, et al. (1998) The distribution and inversion polymorphism of chromosomally recognized taxa of the Anopheles gambiae complex in Mali, West Africa. Parassitologia 40: 477-511.
60. Wang M-H, Marinotti O, James AA, Walker E, Githure J, et al. (2010) Genome-Wide Patterns of Gene Expression during Aging in the African Malaria Vector Anopheles gambiae. PLoS ONE 5: e13359.
61. Benjamini Y, Hochberg Y, (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society, Series B (Methodological) 57: 289-300.
62. Venn J, (1880) On the Diagrammatic and Mechanical Representation of Propositions and Reasonings. Dublin Philosophical Magazine and Journal of Science 10: 1-18.
63. Ribeiro J, Topalis P, Louis C, (2004) AnoXcel: an Anopheles gambiae protein database. Insect Mol Biol 13: 449-457.
64. Livak K, Schmittgen T, (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25: 402-408.