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Volumn 82, Issue 9, 2011, Pages

A robotics platform for automated batch fabrication of high density, microfluidics-based DNA microarrays, with applications to single cell, multiplex assays of secreted proteins

(7) Ahmad, Habib a Sutherland, Alex a Shin, Young Shik a Hwang, Kiwook a Qin, Lidong a,b Krom, Russell John a Heath, James R a

a California Institute of Technology (United States)

b HOUSTON METHODIST RESEARCH INSTITUTE (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BATCH FABRICATION; BROAD APPLICATION; CHIP-SCALE; DNA MICRO-ARRAY; HIGH DENSITY; MACROPHAGE CELLS; MULTIPLEX ASSAYS; PARALLEL ASSAYS; REPRODUCIBILITIES; ROBOTICS PLATFORMS; SECRETED PROTEIN; SINGLE CELLS; SMALL SAMPLE SIZE;

BAR CODES; BIOASSAY; BIOCHIPS; CELLS; DNA; MICROFLUIDICS; ROBOTICS; SUBSTRATES;

PROTEINS;

PROTEIN;

ARTICLE; AUTOMATION; CELL LINE; COMPUTER PROGRAM; DNA MICROARRAY; GENETICS; HUMAN; INSTRUMENTATION; MACROPHAGE; METABOLISM; MICROFLUIDIC ANALYSIS; ROBOTICS; SECRETION; SINGLE CELL ANALYSIS;

AUTOMATION; CELL LINE; HUMANS; MACROPHAGES; MICROFLUIDIC ANALYTICAL TECHNIQUES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEINS; ROBOTICS; SINGLE-CELL ANALYSIS; SOFTWARE;

EID: 80053517292 PISSN: 00346748 EISSN: None Source Type: Journal
DOI: 10.1063/1.3636077 Document Type: Article

Times cited : (12)

References (30)

1
- 0001996513
- (Eaton Publishing Co., Natick)
- D. Rose, Microfluidic Technologies and Instrumentation for Printing DNA Microarrays (Eaton Publishing Co., Natick, 2000), pp. 19-38.
- (2000) Microfluidic Technologies and Instrumentation for Printing DNA Microarrays , pp. 19-38
- Rose, D.¹

2
- 0032703889
- 10.1016/S0142-9612(99)00165-9
- R. S. Kane, S. Takayama, E. Ostuni, D. E. Ingber, and G. M. Whitesides, Biomaterials 20, 2363 (1999). 10.1016/S0142-9612(99)00165-9
- (1999) Biomaterials , vol.20 , pp. 2363
- Kane, R.S.¹ Takayama, S.² Ostuni, E.³ Ingber, D.E.⁴ Whitesides, G.M.⁵

3
- 0030948781
- Patterned delivery of immunoglobulins to surfaces using microfluidic networks
- DOI 10.1126/science.276.5313.779
- E. Delamarche, A. Bernard, H. Schmid, B. Michel, and H. Biebuyck, Science 276, 779 (1997). 10.1126/science.276.5313.779 (Pubitemid 27199854)
- (1997) Science , vol.276 , Issue.5313 , pp. 779-781
- Delamarche, E.¹ Bernard, A.² Schmid, H.³ Michel, B.⁴ Biebuyck, H.⁵

4
- 64649092975
- 10.1109/JMEMS.2008.916312
- C.-E. Ho, C.-C. Chieng, M.-H. Chen, and F.-G. Tseng, J. Microelectromech. Syst. 17, 309 (2008). 10.1109/JMEMS.2008.916312
- (2008) J. Microelectromech. Syst. , vol.17 , pp. 309
- Ho, C.-E.¹ Chieng, C.-C.² Chen, M.-H.³ Tseng, F.-G.⁴

5
- 33748555610
- A novel PDMS microfluidic spotter for fabrication of protein chips and microarrays
- DOI 10.1109/JMEMS.2006.880289
- D. A. Chang-Yen, D. G. Myszka, and B. K. Gale, J. Microelectromech. Syst. 15, 1145 (2006). 10.1109/JMEMS.2006.880289 (Pubitemid 44566932)
- (2006) Journal of Microelectromechanical Systems , vol.15 , Issue.5 , pp. 1145-1151
- Chang-Yen, D.A.¹ Myszka, D.G.² Gale, B.K.³

6
- 10544256600
- 10.1038/nbt1296-1675
- D. J. Lockhart, H. Dong, M. C. Byrne, M. T. Follettie, M. V. Gallo, M. S. Chee, M. Mittmann, C. Wang, M. Kobayashi, H. Norton, and E. L. Brown, Nat. Biotechnol. 14, 1675 (1996). 10.1038/nbt1296-1675
- (1996) Nat. Biotechnol. , vol.14 , pp. 1675
- Lockhart, D.J.¹ Dong, H.² Byrne, M.C.³ Follettie, M.T.⁴ Gallo, M.V.⁵ Chee, M.S.⁶ Mittmann, M.⁷ Wang, C.⁸ Kobayashi, M.⁹ Norton, H.¹⁰ Brown, E.L.¹¹

7
- 0032846163
- Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array
- DOI 10.1038/13664
- S. Singh-Gasson, R. D. Green, Y. Yue, C. Nelson, F. Blattner, M. R. Sussman, and F. Cerrina, Nat. Biotechnol. 17, 974 (1999). 10.1038/13664 (Pubitemid 29474852)
- (1999) Nature Biotechnology , vol.17 , Issue.10 , pp. 974-978
- Singh-Gasson, S.¹ Green, R.D.² Yue, Y.³ Nelson, C.⁴ Blattner, F.⁵ Sussman, M.R.⁶ Cerrina, F.⁷

8
- 33847673624
- Applications of dip-pen nanolithography
- DOI 10.1038/nnano.2007.39, PII NNANO200739
- K. Salaita, Y. H. Wang, and C. A. Mirkin, Nat. Nanotechnol. 2, 145 (2007). 10.1038/nnano.2007.39 (Pubitemid 46364506)
- (2007) Nature Nanotechnology , vol.2 , Issue.3 , pp. 145-155
- Salaita, K.¹ Wang, Y.² Mirkin, C.A.³

9
- 1542723110
- Microcontact printing of DNA molecules
- DOI 10.1021/ac035127w
- S. A. Lange, V. Benes, D. P. Kern, J. K. H. Hrber, and A. Bernard, Anal. Chem. 76, 1641 (2004). 10.1021/ac035127w (Pubitemid 38338408)
- (2004) Analytical Chemistry , vol.76 , Issue.6 , pp. 1641-1647
- Lange, S.A.¹ Benes, V.² Kern, D.P.³ Horber, J.K.H.⁴ Bernard, A.⁵

10
- 73349117840
- 10.1002/smll.200900862
- M. Geissler, E. Roy, J.-S. Deneault, M. Arbour, G. A. Diaz-Quijada, A. Nantel, and T. Veres, Small 5, 2514 (2009). 10.1002/smll.200900862
- (2009) Small , vol.5 , pp. 2514
- Geissler, M.¹ Roy, E.² Deneault, J.-S.³ Arbour, M.⁴ Diaz-Quijada, G.A.⁵ Nantel, A.⁶ Veres, T.⁷

11
- 33750926847
- Bio-microarray fabrication techniques - A review
- DOI 10.1080/07388550600978358, PII H3814724178612LW
- I. Barbulovic-Nad, M. Lucente, Y. Sun, M. Zhang, A. R. Wheeler, and M. Bussmann, Crit. Rev. Biotechnol. 26, 237 (2006). 10.1080/07388550600978358 (Pubitemid 44729815)
- (2006) Critical Reviews in Biotechnology , vol.26 , Issue.4 , pp. 237-259
- Barbulovic-Nad, I.¹ Lucente, M.² Sun, Y.³ Zhang, M.⁴ Wheeler, A.R.⁵ Bussmann, M.⁶

12
- 0035875553
- 10.1093/nar/29.12.2549
- G. C. Tseng, M.-K. Oh, L. Rohlin, J. C. Liao, and W. H. Wong, Nucleic Acids Res. 29, 2549 (2001). 10.1093/nar/29.12.2549
- (2001) Nucleic Acids Res. , vol.29 , pp. 2549
- Tseng, G.C.¹ Oh, M.-K.² Rohlin, L.³ Liao, J.C.⁴ Wong, W.H.⁵

13
- 79958122357
- 10.1038/nm.2375
- C. Ma, R. Fan, H. Ahmad, Q. Shi, B. Comin-Anduix, T. Chodon, R. C. Koya, C. Liu, G. A. Kwong, C. G. Radu, A. Ribas, and J. R. Heath, Nat. Med. 17, 738 (2011). 10.1038/nm.2375
- (2011) Nat. Med. , vol.17 , pp. 738
- Ma, C.¹ Fan, R.² Ahmad, H.³ Shi, Q.⁴ Comin-Anduix, B.⁵ Chodon, T.⁶ Koya, R.C.⁷ Liu, C.⁸ Kwong, G.A.⁹ Radu, C.G.¹⁰ Ribas, A.¹¹ Heath, J.R.¹²

14
- 33749624177
- Cancer regression in patients after transfer of genetically engineered lymphocytes
- DOI 10.1126/science.1129003
- R. A. Morgan, M. E. Dudley, J. R. Wunderlich, M. S. Hughes, J. C. Yang, R. M. Sherry, R. E. Royal, S. L. Topalian, U. S. Kammula, N. P. Restifo, Z. Zheng, A. Nahvi, C. R. de Vries, L. J. Rogers-Freezer, S. A. Mavroukakis, and S. A. Rosenberg, Science 314, 126 (2006). 10.1126/science.1129003 (Pubitemid 44547756)
- (2006) Science , vol.314 , Issue.5796 , pp. 126-129
- Morgan, R.A.¹ Dudley, M.E.² Wunderlich, J.R.³ Hughes, M.S.⁴ Yang, J.C.⁵ Sherry, R.M.⁶ Royal, R.E.⁷ Topalian, S.L.⁸ Kammula, U.S.⁹ Restifo, N.P.¹⁰ Zheng, Z.¹¹ Nahvi, A.¹² De Vries, C.R.¹³ Rogers-Freezer, L.J.¹⁴ Mavroukakis, S.A.¹⁵ Rosenberg, S.A.¹⁶

15
- 78349260412
- 10.1002/cphc.201000528
- Y. S. Shin, H. Ahmad, Q. Shi, H. Kim, T. A. Pascal, R. Fan, W. A. Goddard III, and J. R. Heath, ChemPhysChem 11, 3063 (2010). 10.1002/cphc.201000528
- (2010) ChemPhysChem , vol.11 , pp. 3063
- Shin, Y.S.¹ Ahmad, H.² Shi, Q.³ Kim, H.⁴ Pascal, T.A.⁵ Fan, R.⁶ Goddard III, W.A.⁷ Heath, J.R.⁸

16
- 34347249220
- Array feature size influences nucleic acid surface capture in DNA microarrays
- DOI 10.1073/pnas.0606054104
- D. S. Dandy, P. Wu, and D. W. Granger, Proc. Natl. Acad. Sci. U.S.A. 104, 8223 (2007). 10.1073/pnas.0606054104 (Pubitemid 47175469)
- (2007) Proceedings of the National Academy of Sciences of the United States of America , vol.104 , Issue.20 , pp. 8223-8228
- Dandy, D.S.¹ Wu, P.² Grainger, D.W.³

17
- 33847299488
- 10.1021/ja065930i
- R. C. Bailey, G. A. Kwong, C. G. Radu, O. N. Witte, and J. R. Heath, J. Am. Chem. Soc. 129, 1959 (2007). 10.1021/ja065930i
- (2007) J. Am. Chem. Soc. , vol.129 , pp. 1959
- Bailey, R.C.¹ Kwong, G.A.² Radu, C.G.³ Witte, O.N.⁴ Heath, J.R.⁵

18
- 34347256054
- Microfluidic large-scale integration: The evolution of design rules for biological automation
- DOI 10.1146/annurev.biophys.36.040306.132646
- J. Melin and S. R. Quake, Annu. Rev. Biophys. Biomol. Struct. 36, 213 (2007). 10.1146/annurev.biophys.36.040306.132646 (Pubitemid 46998117)
- (2007) Annual Review of Biophysics and Biomolecular Structure , vol.36 , pp. 213-231
- Melin, J.¹ Quake, S.R.²

19
- 24144463795
- Characterization of interconnects used in PDMS microfluidic systems
- DOI 10.1088/0960-1317/15/5/005
- A. M. Christensen, D. A. Chang-Yen, and B. K. Gale, J. Micromech. Microeng. 15, 928 (2005). 10.1088/0960-1317/15/5/005 (Pubitemid 41237421)
- (2005) Journal of Micromechanics and Microengineering , vol.15 , Issue.5 , pp. 928-934
- Christensen, A.M.¹ Chang-Yen, D.A.² Gale, B.K.³

20
- 67651049971
- 10.1586/erd.09.11
- C. M. Klapperich, Expert Rev. Med. Devices 6, 211 (2009). 10.1586/erd.09.11
- (2009) Expert Rev. Med. Devices , vol.6 , pp. 211
- Klapperich, C.M.¹

21
- 18544410036
- Art#. 10.1186/gb-2003-4-1-r5
- H. Y. Wang, R. L. Malek, A. E. Kwitek, A. S. Greene, T. V. Luu, B. Behbahani, B. Frank, J. Quackenbush, and N. H. Lee, Genome Biol. 4, Art# R5 (2003). 10.1186/gb-2003-4-1-r5
- (2003) Genome Biol. , vol.4 , pp. 5
- Wang, H.Y.¹ Malek, R.L.² Kwitek, A.E.³ Greene, A.S.⁴ Luu, T.V.⁵ Behbahani, B.⁶ Frank, B.⁷ Quackenbush, J.⁸ Lee, N.H.⁹

22
- 80053513247
- See supplementary material at E-RSINAK-82-037109 for a listing of oligonucleotide reagents used in the assays, calibration curves for multiplex protein assays, morphological changes in THP-1 cells following exposure to PMALPS, and scatter plots for selected proteins from different SCBC chiexperiments
- See supplementary material at http://dx.doi.org/10.1063/1.3636077 E-RSINAK-82-037109 for a listing of oligonucleotide reagents used in the assays, calibration curves for multiplex protein assays, morphological changes in THP-1 cells following exposure to PMALPS, and scatter plots for selected proteins from different SCBC chip experiments.

23
- 78049295628
- 10.1039/c0lc00132e
- J. Wang, H. Ahmad, C. Ma, Q. Shi, O. Vermesh, U. Vermesh, and J. R. Heath, Lab Chip 10, 3157 (2010). 10.1039/c0lc00132e
- (2010) Lab Chip , vol.10 , pp. 3157
- Wang, J.¹ Ahmad, H.² Ma, C.³ Shi, Q.⁴ Vermesh, O.⁵ Vermesh, U.⁶ Heath, J.R.⁷

24
- 51249106861
- 10.1016/j.clim.2008.06.009
- E. M. Bradshaw, S. C. Kent, V. Tripuraneni, T. Orban, H. L. Ploegh, D. A. Hafler, and J. C. Love, Clin. Immunol. 129, 10 (2008). 10.1016/j.clim.2008.06. 009
- (2008) Clin. Immunol. , vol.129 , pp. 10
- Bradshaw, E.M.¹ Kent, S.C.² Tripuraneni, V.³ Orban, T.⁴ Ploegh, H.L.⁵ Hafler, D.A.⁶ Love, J.C.⁷

25
- 70349617709
- 10.1021/ac901390j
- H. Zhu, G. Stybayeva, J. Silangcruz, J. Yan, E. Ramanculov, S. Dandekar, M. D. George, and A. Revzin, Anal. Chem. 81, 8150 (2009). 10.1021/ac901390j
- (2009) Anal. Chem. , vol.81 , pp. 8150
- Zhu, H.¹ Stybayeva, G.² Silangcruz, J.³ Yan, J.⁴ Ramanculov, E.⁵ Dandekar, S.⁶ George, M.D.⁷ Revzin, A.⁸

26
- 17744371331
- TNF-α induction by LPS is regulated posttranscriptionally via a Tpl2/ERK-dependent pathway
- DOI 10.1016/S0092-8674(00)00210-5
- C. D. Dumitru, J. D. Ceci, C. Tsatsanis, D. Kontoyiannis, K. Stamatakis, J. H. Lin, C. Patriotis, N. A. Jenkins, N. G. Copeland, G. Kollias, and P. N. Tsichlis, Cell 103, 1071 (2000). 10.1016/S0092-8674(00)00210-5 (Pubitemid 32040907)
- (2000) Cell , vol.103 , Issue.7 , pp. 1071-1083
- Dumitru, C.D.¹ Ceci, J.D.² Tsatsanis, C.³ Kontoyiannis, D.⁴ Stamatakis, K.⁵ Lin, J.-H.⁶ Patriotis, C.⁷ Jenkins, N.A.⁸ Copeland, N.G.⁹ Kollias, G.¹⁰ Tsichlis, P.N.¹¹

27
- 0034680145
- 10.1038/35021228
- A. Aderem and R. J. Ulevitch, Nature (London) 406, 782 (2000). 10.1038/35021228
- (2000) Nature (London) , vol.406 , pp. 782
- Aderem, A.¹ Ulevitch, R.J.²

28
- 79959677297
- 10.1016/j.bpj.2011.04.025
- Y. S. Shin, F. Remacle, R. Fan, K. Huang, W. Wei, H. Ahmad, R. D. Levine, and J. R. Heath, Biophys. J. 100, 2378 (2011). 10.1016/j.bpj.2011.04.025
- (2011) Biophys. J. , vol.100 , pp. 2378
- Shin, Y.S.¹ Remacle, F.² Fan, R.³ Huang, K.⁴ Wei, W.⁵ Ahmad, H.⁶ Levine, R.D.⁷ Heath, J.R.⁸

29
- 34848838673
- High-resolution electrohydrodynamic jet printing
- DOI 10.1038/nmat1974, PII NMAT1974
- J.-U. Park, M. Hardy, S. J. Kang, K. Barton, K. Adair, D. K. Mukhopadhyay, C. Y. Lee, M. S. Strano, A. G. Alleyne, J. G. Georgiadis, P. M. Ferreira, and J. A. Rogers, Nature Mater. 6, 782 (2007). 10.1038/nmat1974 (Pubitemid 47511280)
- (2007) Nature Materials , vol.6 , Issue.10 , pp. 782-789
- Park, J.-U.¹ Hardy, M.² Kang, S.J.³ Barton, K.⁴ Adair, K.⁵ Mukhopadhyay, D.K.⁶ Lee, C.Y.⁷ Strano, M.S.⁸ Alleyne, A.G.⁹ Georgiadis, J.G.¹⁰ Ferreira, P.M.¹¹ Rogers, J.A.¹²

30
- 79960903160
- 10.1002/anie.201102249
- U. Vermesh, O. Vermesh, C. Ma, G. A. Kwong, K. Hwang, and J. R. Heath, Angew. Chem., Int. Ed. 50, 7378 (2011). 10.1002/anie.201102249
- (2011) Angew. Chem., Int. Ed. , vol.50 , pp. 7378
- Vermesh, U.¹ Vermesh, O.² Ma, C.³ Kwong, G.A.⁴ Hwang, K.⁵ Heath, J.R.⁶

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