-
1
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
Bailey, T. L. & Elkan, C. (1994). Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 2, 28-36.
-
(1994)
Proc Int Conf Intell Syst Mol Biol
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
2
-
-
1442299471
-
Streptococcus pneumoniae colonisation: The key to pneumococcal disease
-
Bogaert, D., De Groot, R. & Hermans, P. W. (2004). Streptococcus pneumoniae colonisation: the key to pneumococcal disease. Lancet Infect Dis 4, 144-154.
-
(2004)
Lancet Infect Dis
, vol.4
, pp. 144-154
-
-
Bogaert, D.1
de Groot, R.2
Hermans, P.W.3
-
3
-
-
49649116071
-
Revisiting the host as a growth medium
-
Brown, S. A., Palmer, K. L. & Whiteley, M. (2008). Revisiting the host as a growth medium. Nat Rev Microbiol 6, 657-666.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 657-666
-
-
Brown, S.A.1
Palmer, K.L.2
Whiteley, M.3
-
4
-
-
33845626641
-
How phospho- transferase system-related protein phosphorylation regulates carbohyd- rate metabolism in bacteria
-
Deutscher, J., Francke, C. & Postma, P. W. (2006). How phospho- transferase system-related protein phosphorylation regulates carbohyd- rate metabolism in bacteria. Microbiol Mol Biol Rev 70, 939-1031.
-
(2006)
Microbiol Mol Biol Rev
, vol.70
, pp. 939-1031
-
-
Deutscher, J.1
Francke, C.2
Postma, P.W.3
-
5
-
-
33846966329
-
A new integrative reporter plasmid for Streptococcus pneumoniae
-
Halfmann, A., Hakenbeck, R. & Bruckner, R. (2007). A new integrative reporter plasmid for Streptococcus pneumoniae. FEMS Microbiol Lett 268, 217-224.
-
(2007)
FEMS Microbiol Lett
, vol.268
, pp. 217-224
-
-
Halfmann, A.1
Hakenbeck, R.2
Bruckner, R.3
-
6
-
-
0036047758
-
Large-scale identification of serotype 4 Streptococcus pneumoniae virulence factors
-
Hava, D. L. & Camilli, A. (2002). Large-scale identification of serotype 4 Streptococcus pneumoniae virulence factors. Mol Microbiol 45, 1389-1406.
-
(2002)
Mol Microbiol
, vol.45
, pp. 1389-1406
-
-
Hava, D.L.1
Camilli, A.2
-
7
-
-
40949162838
-
The role of Streptococcus pneumoniae virulence factors in host respiratory colonization and disease
-
Kadioglu, A., Weiser, J. N., Paton, J. C. & Andrew, P. W. (2008). The role of Streptococcus pneumoniae virulence factors in host respiratory colonization and disease. Nat Rev Microbiol 6, 288-301.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 288-301
-
-
Kadioglu, A.1
Weiser, J.N.2
Paton, J.C.3
Andrew, P.W.4
-
8
-
-
0031473543
-
Wild-type Escherichia coli grows on the chitin disaccharide, N,N9-diacetylchitobiose, by expressing the cel operon
-
Keyhani, N. O. & Roseman, S. (1997). Wild-type Escherichia coli grows on the chitin disaccharide, N,N9-diacetylchitobiose, by expressing the cel operon. Proc Natl Acad Sci U S A 94, 14367-14371.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 14367-14371
-
-
Keyhani, N.O.1
Roseman, S.2
-
9
-
-
3042558397
-
Involvement of Streptococcus gordonii beta-glucoside metabolism systems in adhesion, biofilm formation, and in vivo gene expression
-
Kilic,A.O,Tao,L.,Zhang,Y.,Lei,Y.,Khammanivong,A.& Herzberg, M. C. (2004). Involvement of Streptococcus gordonii beta-glucoside metabolism systems in adhesion, biofilm formation, and in vivo gene expression. J Bacteriol 186, 4246-4253.
-
(2004)
J Bacteriol
, vol.186
, pp. 4246-4253
-
-
Herzberg, M.C.1
-
10
-
-
76149123543
-
Pneumococcal modification of host sugars: A major contributor to colonization of the human airway?
-
King, S. J. (2010). Pneumococcal modification of host sugars: a major contributor to colonization of the human airway? Mol Oral Microbiol 25, 15-24.
-
(2010)
Mol Oral Microbiol
, vol.25
, pp. 15-24
-
-
King, S.J.1
-
11
-
-
32244436337
-
To have neighbour's fare: Extending the molecular toolbox for Streptococcus pneumoniae
-
Kloosterman, T. G., Bijlsma, J. J. E., Kok, J. & Kuipers, O. P. (2006a). To have neighbour's fare: extending the molecular toolbox for Streptococcus pneumoniae. Microbiology 152, 351-359.
-
(2006)
Microbiology
, vol.152
, pp. 351-359
-
-
Kloosterman, T.G.1
Bijlsma, J.J.E.2
Kok, J.3
Kuipers, O.P.4
-
12
-
-
33748741110
-
Regulation of glutamine and glutamate metabolism by GlnR and GlnA in Streptococcus pneumoniae
-
Kloosterman, T. G., Hendriksen, W. T., Bijlsma, J. J., Bootsma, H. J., van Hijum, S. A., Kok, J., Hermans, P. W. & Kuipers, O. P. (2006b). Regulation of glutamine and glutamate metabolism by GlnR and GlnA in Streptococcus pneumoniae. J Biol Chem 281, 25097-25109.
-
(2006)
J Biol Chem
, vol.281
, pp. 25097-25109
-
-
Kloosterman, T.G.1
Hendriksen, W.T.2
Bijlsma, J.J.3
Bootsma, H.J.4
van Hijum, S.A.5
Kok, J.6
Hermans, P.W.7
Kuipers, O.P.8
-
13
-
-
33845957666
-
Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsu- lated laboratory strain R6
-
Lanie, J. A., Ng, W. L., Kazmierczak, K. M., Andrzejewski, T. M., Davidsen, T. M., Wayne, K. J., Tettelin, H., Glass, J. I. & Winkler, M. E. (2007). Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsu- lated laboratory strain R6. J Bacteriol 189, 38-51.
-
(2007)
J Bacteriol
, vol.189
, pp. 38-51
-
-
Lanie, J.A.1
Ng, W.L.2
Kazmierczak, K.M.3
Andrzejewski, T.M.4
Davidsen, T.M.5
Wayne, K.J.6
Tettelin, H.7
Glass, J.I.8
Winkler, M.E.9
-
14
-
-
0034999527
-
A functional genomic analysis of type 3 Streptococcus pneumoniae virulence
-
Lau, G. W., Haataja, S., Lonetto, M., Kensit, S. E., Marra, A., Bryant, A. P., McDevitt, D., Morrison, D. A. & Holden, D. W. (2001). A functional genomic analysis of type 3 Streptococcus pneumoniae virulence. Mol Microbiol 40, 555-571.
-
(2001)
Mol Microbiol
, vol.40
, pp. 555-571
-
-
Lau, G.W.1
Haataja, S.2
Lonetto, M.3
Kensit, S.E.4
Marra, A.5
Bryant, A.P.6
McDevitt, D.7
Morrison, D.A.8
Holden, D.W.9
-
15
-
-
0029908131
-
A general system for generating unlabelled gene replacements in bacterial chromosomes
-
Leenhouts, K., Buist, G., Bolhuis, A., ten Berge, A., Kiel, J., Mierau, I., Dabrowska, M., Venema, G. & Kok, J. (1996). A general system for generating unlabelled gene replacements in bacterial chromosomes. Mol Gen Genet 253, 217-224.
-
(1996)
Mol Gen Genet
, vol.253
, pp. 217-224
-
-
Leenhouts, K.1
Buist, G.2
Bolhuis, A.3
Ten, B.A.4
Kiel, J.5
Mierau, I.6
Dabrowska, M.7
Venema, G.8
Kok, J.9
-
16
-
-
0034653873
-
Structural basis of hyaluronan degradation by Streptococcus pneumo- niae hyaluronate lyase
-
Li, S., Kelly, S. J., Lamani, E., Ferraroni, M. & Jedrzejas, M. J. (2000). Structural basis of hyaluronan degradation by Streptococcus pneumo- niae hyaluronate lyase. EMBO J 19, 1228-1240.
-
(2000)
EMBO J
, vol.19
, pp. 1228-1240
-
-
Li, S.1
Kelly, S.J.2
Lamani, E.3
Ferraroni, M.4
Jedrzejas, M.J.5
-
17
-
-
0035827588
-
Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis of global gene expression in Escherichia coli K12
-
Long, A. D., Mangalam, H. J., Chan, B. Y., Tolleri, L., Hatfield, G. W. & Baldi, P. (2001). Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis of global gene expression in Escherichia coli K12. J Biol Chem 276, 19937-19944.
-
(2001)
J Biol Chem
, vol.276
, pp. 19937-19944
-
-
Long, A.D.1
Mangalam, H.J.2
Chan, B.Y.3
Tolleri, L.4
Hatfield, G.W.5
Baldi, P.6
-
18
-
-
33845765190
-
Transcriptome analysis of temporal regulation of carbon metabolism by CcpA in Bacillus subtilis reveals additional target genes
-
Lulko, A. T., Buist, G., Kok, J. & Kuipers, O. P. (2007). Transcriptome analysis of temporal regulation of carbon metabolism by CcpA in Bacillus subtilis reveals additional target genes. J Mol Microbiol Biotechnol 12, 82-95.
-
(2007)
J Mol Microbiol Biotechnol
, vol.12
, pp. 82-95
-
-
Lulko, A.T.1
Buist, G.2
Kok, J.3
Kuipers, O.P.4
-
19
-
-
33846897127
-
The two-component regulatory system TCS08 is involved in cellobiose metabolism of Streptococcus pneumoniae R6
-
McKessar, S. J. & Hakenbeck, R. (2007). The two-component regulatory system TCS08 is involved in cellobiose metabolism of Streptococcus pneumoniae R6. J Bacteriol 189, 1342-1350.
-
(2007)
J Bacteriol
, vol.189
, pp. 1342-1350
-
-
McKessar, S.J.1
Hakenbeck, R.2
-
20
-
-
1842456932
-
The pathogenesis of streptococcal infections: From tooth decay to meningitis
-
Mitchell, T. J. (2003). The pathogenesis of streptococcal infections: from tooth decay to meningitis. Nat Rev Microbiol 1, 219-230.
-
(2003)
Nat Rev Microbiol
, vol.1
, pp. 219-230
-
-
Mitchell, T.J.1
-
21
-
-
0036171847
-
The pneumococcus: Carriage, disease and conjugate vaccines
-
Obaro, S. & Adegbola, R. (2002). The pneumococcus: carriage, disease and conjugate vaccines. J Med Microbiol 51, 98-104.
-
(2002)
J Med Microbiol
, vol.51
, pp. 98-104
-
-
Obaro, S.1
Adegbola, R.2
-
22
-
-
33645075213
-
Genomic variation in Streptococcus mutans: Deletions affecting the multiple pathways of b- glucoside metabolism
-
Old, L. A., Lowes, S. & Russell, R. R. (2006). Genomic variation in Streptococcus mutans: deletions affecting the multiple pathways of b- glucoside metabolism. Oral Microbiol Immunol 21, 21-27.
-
(2006)
Oral Microbiol Immunol
, vol.21
, pp. 21-27
-
-
Old, L.A.1
Lowes, S.2
Russell, R.R.3
-
25
-
-
80051937057
-
The cop operon is required for copper homeostasis and contributes to virulence in Streptococcus pneumoniae
-
doi:10.1016/S1473-3099(04)00938-7
-
Shafeeq, S., Yesilkaya, H., Kloosterman, T. G., Narayanan, G., Andrew, P. W., Kuipers, O. P. & Morrissey, J. A. (2011b). The cop operon is required for copper homeostasis and contributes to virulence in Streptococcus pneumoniae. Mol Microbiol [Epub ahead of print]. doi:10.1016/S1473-3099(04)00938-7.
-
(2011)
Mol Microbiol [Epub Ahead of Print]
-
-
Shafeeq, S.1
Yesilkaya, H.2
Kloosterman, T.G.3
Narayanan, G.4
Andrew, P.W.5
Kuipers, O.P.6
Morrissey, J.A.7
-
26
-
-
46049089600
-
The role of complex carbohydrate catabolism in the pathogenesis of invasive streptococci
-
Shelburne, S. A., Davenport, M. T., Keith, D. B. & Musser, J. M. (2008). The role of complex carbohydrate catabolism in the pathogenesis of invasive streptococci. Trends Microbiol 16, 318-325.
-
(2008)
Trends Microbiol
, vol.16
, pp. 318-325
-
-
Shelburne, S.A.1
Davenport, M.T.2
Keith, D.B.3
Musser, J.M.4
-
27
-
-
57949087585
-
The growth phase-dependent regulation of the pilus locus genes by two-component system TCS08 in Streptococcus pneumoniae
-
Song, X. M., Connor, W., Hokamp, K., Babiuk, L. A. & Potter, A. A. (2009). The growth phase-dependent regulation of the pilus locus genes by two-component system TCS08 in Streptococcus pneumoniae. Microb Pathog 46, 28-35.
-
(2009)
Microb Pathog
, vol.46
, pp. 28-35
-
-
Song, X.M.1
Connor, W.2
Hokamp, K.3
Babiuk, L.A.4
Potter, A.A.5
-
28
-
-
0016686551
-
Improved medium for lactic streptococci and their bacteriophages
-
Terzaghi, B. E. & Sandine, W. E. (1975). Improved medium for lactic streptococci and their bacteriophages. Appl Microbiol 29, 807-813.
-
(1975)
Appl Microbiol
, vol.29
, pp. 807-813
-
-
Terzaghi, B.E.1
Sandine, W.E.2
-
29
-
-
0033952304
-
A genomic analysis of two-component signal transduction in Streptococcus pneumoniae
-
Throup, J. P., Koretke, K. K., Bryant, A. P., Ingraham, K. A., Chalker, A. F., Ge, Y., Marra, A., Wallis, N. G., Brown, J. R. & other authors (2000). A genomic analysis of two-component signal transduction in Streptococcus pneumoniae. Mol Microbiol 35, 566-576.
-
(2000)
Mol Microbiol
, vol.35
, pp. 566-576
-
-
Throup, J.P.1
Koretke, K.K.2
Bryant, A.P.3
Ingraham, K.A.4
Chalker, A.F.5
Ge, Y.6
Marra, A.7
Wallis, N.G.8
Brown, J.R.9
-
30
-
-
2642533798
-
MicroPreP: A cDNA microarray data pre- processing framework
-
van Hijum, S. A. F. T., Garci ́a de la Nava, J., Trelles, O., Kok, J. & Kuipers, O. P. (2003). MicroPreP: a cDNA microarray data pre- processing framework. Appl Bioinformatics 2, 241-244.
-
(2003)
Appl Bioinformatics
, vol.2
, pp. 241-244
-
-
van Hijum, S.A.F.T.1
Trelles, O.2
Kok, J.3
Kuipers, O.P.4
-
31
-
-
0035695915
-
Structural insights into the regulation of bacterial signalling proteins containing PRDs
-
van Tilbeurgh, H. & Declerck, N. (2001). Structural insights into the regulation of bacterial signalling proteins containing PRDs. Curr Opin Struct Biol 11, 685-693.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 685-693
-
-
van Tilbeurgh, H.1
Declerck, N.2
-
32
-
-
64049112629
-
Transcriptional regulation of the cellobiose operon of Streptococcus mutans
-
Zeng, L. & Burne, R. A. (2009). Transcriptional regulation of the cellobiose operon of Streptococcus mutans. J Bacteriol 191, 2153-2162.
-
(2009)
J Bacteriol
, vol.191
, pp. 2153-2162
-
-
Zeng, L.1
Burne, R.A.2
-
33
-
-
33846916395
-
Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363
-
Zomer, A. L., Buist, G., Larsen, R., Kok, J. & Kuipers, O. P. (2007). Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363. J Bacteriol 189, 1366-1381.
-
(2007)
J Bacteriol
, vol.189
, pp. 1366-1381
-
-
Zomer, A.L.1
Buist, G.2
Larsen, R.3
Kok, J.4
Kuipers, O.P.5
|