-
1
-
-
21444448621
-
Strategies for compound selection
-
Olah, M. M.; Bologa, C. G.; Oprea, T. I. Strategies for compound selection Curr. Drug Discov. Technol. 2004, 1, 211-220
-
(2004)
Curr. Drug Discov. Technol.
, vol.1
, pp. 211-220
-
-
Olah, M.M.1
Bologa, C.G.2
Oprea, T.I.3
-
2
-
-
33644861784
-
Diversity in medicinal chemistry space
-
Gorse, A. D. Diversity in medicinal chemistry space Curr. Top. Med. Chem. 2006, 6, 3-18
-
(2006)
Curr. Top. Med. Chem.
, vol.6
, pp. 3-18
-
-
Gorse, A.D.1
-
3
-
-
13844312649
-
ZINC - A free database of commercially available compounds for virtual screening
-
DOI 10.1021/ci049714+
-
Irwin, J. J.; Shoichet, B. K. ZINC-A Free Database of Commercially Available Compounds for Virtual Screening J. Chem. Inf. Model. 2005, 45, 177-182 (Pubitemid 40736970)
-
(2005)
Journal of Chemical Information and Modeling
, vol.45
, Issue.1
, pp. 177-182
-
-
Irwin, J.J.1
Shoichet, B.K.2
-
4
-
-
67649619336
-
970 Million Druglike Small Molecules for Virtual Screening in the Chemical Universe Database GDB-13
-
Blum, L. C.; Reymond, J.-L. 970 Million Druglike Small Molecules for Virtual Screening in the Chemical Universe Database GDB-13 J. Am. Chem. Soc. 2009, 131, 8732-8733
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 8732-8733
-
-
Blum, L.C.1
Reymond, J.-L.2
-
5
-
-
79960275000
-
Accelerating Two Algorithms for Large-Scale Compound Selection on GPUs
-
Liao, Q.; Wang, J.; Watson, I. A. Accelerating Two Algorithms for Large-Scale Compound Selection on GPUs J. Chem. Inf. Model. 2011, 51, 1017-1024
-
(2011)
J. Chem. Inf. Model.
, vol.51
, pp. 1017-1024
-
-
Liao, Q.1
Wang, J.2
Watson, I.A.3
-
6
-
-
72449199553
-
PAPER - Accelerating parallel evaluations of ROCS
-
Haque, I. S.; Pande, V. S. PAPER - Accelerating parallel evaluations of ROCS J. Comput. Chem. 2009, 31, 117-132
-
(2009)
J. Comput. Chem.
, vol.31
, pp. 117-132
-
-
Haque, I.S.1
Pande, V.S.2
-
7
-
-
77952004390
-
SIML: A Fast SIMD Algorithm for Calculating LINGO Chemical Similarities on GPUs and CPUs
-
Haque, I. S.; Pande, V. S.; Walters, W. P. SIML: A Fast SIMD Algorithm for Calculating LINGO Chemical Similarities on GPUs and CPUs J. Chem. Inf. Model. 2010, 50, 560-564
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 560-564
-
-
Haque, I.S.1
Pande, V.S.2
Walters, W.P.3
-
8
-
-
79953166860
-
Using Inverted Indices for Accelerating LINGO Calculations
-
Kristensen, T. G.; Nielsen, J.; Pedersen, C. N. S. Using Inverted Indices for Accelerating LINGO Calculations J. Chem. Inf. Model. 2011, 51, 597-600
-
(2011)
J. Chem. Inf. Model.
, vol.51
, pp. 597-600
-
-
Kristensen, T.G.1
Nielsen, J.2
Pedersen, C.N.S.3
-
9
-
-
77954037387
-
SCISSORS: A Linear-Algebraical Technique to Rapidly Approximate Chemical Similarities
-
Haque, I. S.; Pande, V. S. SCISSORS: A Linear-Algebraical Technique to Rapidly Approximate Chemical Similarities J. Chem. Inf. Model. 2010, 50, 1075-1088
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 1075-1088
-
-
Haque, I.S.1
Pande, V.S.2
-
10
-
-
34247228558
-
Bounds and algorithms for fast exact searches of chemical fingerprints in linear and sublinear time
-
DOI 10.1021/ci600358f
-
Swamidass, S. J.; Baldi, P. Bounds and Algorithms for Fast Exact Searches of Chemical Fingerprints in Linear and Sublinear Time J. Chem. Inf. Model. 2007, 47, 302-317 (Pubitemid 46615935)
-
(2007)
Journal of Chemical Information and Modeling
, vol.47
, Issue.2
, pp. 302-317
-
-
Swamidass, S.J.1
Baldi, P.2
-
11
-
-
10044246048
-
Accelerated K-Means Clustering in Metric Spaces
-
Smellie, A. Accelerated K-Means Clustering in Metric Spaces J. Chem. Inf. Comput. Sci. 2004, 44, 1929-1935
-
(2004)
J. Chem. Inf. Comput. Sci.
, vol.44
, pp. 1929-1935
-
-
Smellie, A.1
-
12
-
-
65249127524
-
Compressed Binary Bit Trees: A New Data Structure for Accelerating Database Searching
-
Smellie, A. Compressed Binary Bit Trees: A New Data Structure For Accelerating Database Searching J. Chem. Inf. Model. 2009, 49, 257-262
-
(2009)
J. Chem. Inf. Model.
, vol.49
, pp. 257-262
-
-
Smellie, A.1
-
13
-
-
0036827075
-
Reoptimization of MDL keys for use in drug discovery
-
DOI 10.1021/ci010132r
-
Durant, J. L.; Leland, B. A.; Henry, D. R.; Nourse, J. G. Reoptimization of MDL Keys for Use in Drug Discovery J. Chem. Inf. Comput. Sci. 2002, 42, 1273-1280 (Pubitemid 35468313)
-
(2002)
Journal of Chemical Information and Computer Sciences
, vol.42
, Issue.6
, pp. 1273-1280
-
-
Durant, J.L.1
Leland, B.A.2
Henry, D.R.3
Nourse, J.G.4
-
14
-
-
77952772341
-
Extended-connectivity fingerprints
-
Rogers, D.; Hahn, M. Extended-connectivity fingerprints J. Chem. Inf. Model 2010, 50, 742-754
-
(2010)
J. Chem. Inf. Model
, vol.50
, pp. 742-754
-
-
Rogers, D.1
Hahn, M.2
-
15
-
-
33845482367
-
-
Daylight Chemical Information Systems, Inc. (accessed May 1, 2011)
-
Fingerprints-Screening and Similarity; Daylight Chemical Information Systems, Inc.: 2008; http://www.daylight.com/dayhtml/doc/theory/theory.finger. html (accessed May 1, 2011).
-
(2008)
Fingerprints-Screening and Similarity
-
-
-
16
-
-
20444388307
-
Small molecule shape-fingerprints
-
DOI 10.1021/ci049651v
-
Haigh, J. A.; Pickup, B. T.; Grant, J. A.; Nicholls, A. Small Molecule Shape-Fingerprints J. Chem. Inf. Model 2005, 45, 673-684 (Pubitemid 40795171)
-
(2005)
Journal of Chemical Information and Modeling
, vol.45
, Issue.3
, pp. 673-684
-
-
Haigh, J.A.1
Pickup, B.T.2
Grant, J.A.3
Nicholls, A.4
-
17
-
-
30844443282
-
Molecular similarity and diversity in chemoinformatics: From theory to applications
-
DOI 10.1007/s11030-006-8697-1
-
Maldonado, A.; Doucet, J.; Petitjean, M.; Fan, B.-T. Molecular similarity and diversity in chemoinformatics: From theory to applications Mol. Divers 2006, 10, 39-79 (Pubitemid 43102376)
-
(2006)
Molecular Diversity
, vol.10
, Issue.1
, pp. 39-79
-
-
Maldonado, A.G.1
Doucet, J.P.2
Petitjean, M.3
Fan, B.-T.4
-
19
-
-
84877689037
-
-
(accessed 1 May 2011)
-
Mula, W. SSSE3: fast popcount. http://wm.ite.pl/articles/sse-popcount. html (accessed 1 May 2011), 2010.
-
(2010)
SSSE3: Fast Popcount
-
-
Mula, W.1
-
20
-
-
42149086905
-
-
1 st ed. OReilly Media: Sebastopol, CA, USA
-
In Beautiful Code: Leading Programmers Explain How They Think, 1 st ed.; Oram, A.; Wilson, G., Eds.; OReilly Media: Sebastopol, CA, USA, 2007.
-
(2007)
Beautiful Code: Leading Programmers Explain How They Think
-
-
Oram, A.1
Wilson, G.2
-
21
-
-
0024662190
-
Clustering a large number of compounds. 1. Establishing the method on an initial sample
-
Hodes, L. Clustering a large number of compounds. 1. Establishing the method on an initial sample J. Chem. Inf. Comput. Sci. 1989, 29, 66-71
-
(1989)
J. Chem. Inf. Comput. Sci.
, vol.29
, pp. 66-71
-
-
Hodes, L.1
-
22
-
-
0036870763
-
Recursive array layouts and fast matrix multiplication
-
Chatterjee, S.; Lebeck, A. R.; Patnala, P. K.; Thottethodi, M. Recursive array layouts and fast matrix multiplication IEEE Trans. Par. Distrib. Syst. 2002, 13, 1105-1123
-
(2002)
IEEE Trans. Par. Distrib. Syst.
, vol.13
, pp. 1105-1123
-
-
Chatterjee, S.1
Lebeck, A.R.2
Patnala, P.K.3
Thottethodi, M.4
-
23
-
-
78651310799
-
Database resources of the National Center for Biotechnology Information
-
Sayers, E. W. Database resources of the National Center for Biotechnology Information Nucleic Acids Res. 2011, 39, 38-51
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 38-51
-
-
Sayers, E.W.1
-
24
-
-
77952579552
-
Demystifying GPU microarchitecture through microbenchmarking
-
Wong, H.; Papadopoulou, M. M.; Sadooghi-Alvandi, M.; Moshovos, A. Demystifying GPU microarchitecture through microbenchmarking IEEE Intl. Symp. Perf. Anal. Syst. Softw. (ISPASS) 2010, 235-246
-
(2010)
IEEE Intl. Symp. Perf. Anal. Syst. Softw. (ISPASS)
, pp. 235-246
-
-
Wong, H.1
Papadopoulou, M.M.2
Sadooghi-Alvandi, M.3
Moshovos, A.4
|