Phylogenetic analysis of S1 gene of infectious bronchitis virus isolates from China

Avian Diseases

Volumn 55, Issue 3, 2011, Pages 451-458

  Yan, Fang ^a   Zhao, Yujun ^a   Yue, Wenbin ^a   Yao, J ^b   Lv, Lihua ^a   Ji, Wenhui ^a   Li, Xuying ^a   Liu, Fengbo ^a   Wu, Qian ^a  

^a SHANXI AGRICULTURAL UNIVERSITY   (China)

^b WEST VIRGINIA UNIVERSITY   (United States)

Author keywords

infectious bronchitis virus; phylogenetic analysis; S1 gene

Indexed keywords

AVIAN INFECTIOUS BRONCHITIS VIRUS; GALLUS GALLUS;

EID: 80053264093     PISSN: 00052086     EISSN: None     Source Type: Journal    
DOI: 10.1637/9446-070510-ResNote.1     Document Type: Article

References (31)

1. Bing, G. X., X. Liu, J. Pu, Q. F. Liu, Q. M. Wu, and J. H. Liu. Different genotypes of nephropathogenic infectious bronchitis viruses cocirculating in chicken population in China. Virus Genes 35:333-337. 2007. (Pubitemid 47087554)
2. Bochkov, Y. A., G. V. Batchenko, L. O. Shcherbakova, A. V. Borisov, and V. V. Drygin. Molecular epizootiology of avian infectious bronchitis in Russia. Avian Pathol. 35:379-393. 2006.
3. Casais, R., B. Dove, D. Cavanagh, and P. Britton. Recombinant avian infectious bronchitis virus expressing a heterologous spike gene demonstrates that the spike protein is a determinant of cell tropism. J. Virol. 77:9084-9089. 2003. (Pubitemid 36936117)
4. Cavanagh, D., and P. J. Davis. Coronavirus IBV: Removal of spike glycopolypeptide S1 by urea abolishes infectivity and haemagglutination but not attachment to cells. J. Gen. Virol. 67:1443-1448. 1986.
5. Cavanagh, D., P. J. Davis, J. H. Darbyshire, and R. W. Peters. Coronavirus IBV: Virus retaining spike glycopolypeptide S2 but not S1 is unable to induce virus-neutralizing or hemagglutination-inhibiting antibody, or induce chicken tracheal protection. J. Gen. Virol. 67:1435-1442. 1986.
6. Cavanagh, D., P. J. Davis, D. J. Pappin, M. M. Binns, M. E. Boursnell, and T. D. Brown. Coronavirus IBV: Partial amino terminal sequencing of spike polypeptide S2 identifies the sequence Arg-Arg-Phe-Arg- Arg at the cleavage site of the spike precursor propolypeptide of IBV strains Beaudette and M41. Virus Res. 4:133-143. 1986. (Pubitemid 16136556)
7. Cowen, B. S., and S. B. Hitchner. Serotyping of avian infectious bronchitis viruses by the virus-neutralization test. Avian Dis. 19:583-595. 1975.
8. Gelb, J. Jr, J. B. Wolff, and C. A. Moran. Variant serotypes of infectious bronchitis virus isolated from commercial layer and broiler chickens. Avian Dis. 35:82-87. 1991.
9. Gough, R. E., W. J. Cox, D. de B. Welchman, K. J. Worthington, and R. C. Jones. Chinese QX strain of infectious bronchitis virus isolated in the UK. Vet. Rec. 162:99-100. 2008. (Pubitemid 351268705)
10. Jackwood, M. W., D. A. Hilt, S. A. Callison, C. W. Lee, H. Plaza, and E. Wade. Spike glycoprotein cleavage recognition site analysis of infectious bronchitis virus. Avian Dis. 45:366-372. 2001. (Pubitemid 32540772)
11. Jones, R. C., K. J. Worthington, I. Capua, and C. J. Naylor. Efficacy of live infectious bronchitis vaccines against a novel European genotype, Italy 02. Vet. Rec. 156:646-647. 2005. (Pubitemid 40753937)
12. Kant, A., G. Koch, D. J. van Roozelaar, J. G. Kusters, F. A. Poelwijk, and B. A. van der Zeijst. Location of antigenic sites defined by neutralizing monoclonal antibodies on the S1 avian infectious bronchitis virus glycopolypeptide. J. Gen. Virol. 73:591-596. 1992.
13. Lee, C. W., D. A. Hilt, and M. W. Jackwood. Typing of field isolates of infectious bronchitis virus based on the sequence of the hypervariable region in the S1 gene. J. Vet. Diagn. Invest. 15:344-348. 2003. (Pubitemid 37481049)
14. Lee, E. K., W. J. Jeon, Y. J. Lee, O. M. Jeong, J. G. Choi, J. H. Kwon, and K. S. Choi. Genetic diversity of avian infectious bronchitis virus isolates in Korea between 2003 and 2006. Avian Dis. 52:332-337. 2008.
15. Li, L., C. Xue, F. Chen, J. Qin, Q. Xie, Y. Bi, and Y. Cao. Isolation and genetic analysis revealed no predominant new strains of avian infectious bronchitis virus circulating in South China during 2004-2008. Vet. Microbiol. 143:145-154. 2010.
16. Liu, S., and X. Kong. A new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and non-vaccinated flocks in China. Avian Pathol. 33:321-327. 2004. (Pubitemid 38940894)
17. Liu, S., Y. Wang, Y. Ma, Z. Han, Q. Zhang, Y. Shao, J. Chen, and X. Kong. Identification of a newly isolated avian infectious bronchitis coronavirus variant in China exhibiting affinity for the respiratory tract. Avian Dis. 52:306-314. 2008. (Pubitemid 351883747)
18. Liu, S. W., Q. X. Zhang, J. D. Chen, Z. X. Han, X. Liu, L. Feng, Y. H. Shao, J. G. Rong, X. G. Kong, and G. Z. Tong. Genetic diversity of avian infectious bronchitis coronavirus strains isolated in China between 1995 and 2004. Arch. Virol. 151:1133-1148. 2006. (Pubitemid 43806815)
19. Mase, M., K. Tsukamoto, K. Imai, and S. Yamaguchi. Phylogenetic analysis of avian infectious bronchitis virus strains isolated in Japan. Arch. Virol. 149:2069-2078. 2004. (Pubitemid 39415421)
20. Mondal, S. P., and C. J. Cardona. Genotypic and phenotypic characterization of the California 99 (Cal99) variant of infectious bronchitis virus. Virus Genes 34:327-341. 2007. (Pubitemid 46474925)
21. Moore, K. M., M. W. Jackwood, and D. A. Hilt. Identification of amino acids involved in a serotype and neutralization specific epitope within the S1 subunit of avian infectious bronchitis virus. Arch. Virol. 142:2249-2256. 1997. (Pubitemid 27518838)
22. Pohuang, T., N. Chansiripornchai, A. Tawatsin, and J. Sasipreeyajan. Detection and molecular characterization of infectious bronchitis virus isolated from recent outbreaks in broiler flocks in Thailand. J. Vet. Sci. 10:219-223. 2009.
23. Shimazaki, Y., Y. Watanabe, M. Harada, Y. Seki, Y. Kuroda, M. Fukuda, E. Honda, S. Suzuki, and S. Nakamura. Genetic analysis of the S1 gene of 4/91 type infectious bronchitis virus isolated in Japan. J. Vet. Med. Sci. 71:583-588. 2009.
24. Tamura, K., J. Dudley, M. Nei, and S. Kumar. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599. 2007. (Pubitemid 47236692)
25. Wang, C. H., and Y. C. Huang. Relationship between serotypes and genotypes based on the hypervariable region of the S1 gene of infectious bronchitis virus. Arch. Virol. 145:291-300. 2000.
26. Wei, Z. J., P. Wei, M. L. Mo, M. Li, T. C. Wei, and K. R. Li. Genetic variation of S1 gene hypervariable region I of infectious bronchitis viruses isolated in different periods in Guangxi. Bing Du Xue Bao. 24:126-132. 2008.
27. Xu, C., J. Zhao, X. Hu, and G. Zhang. Isolation and identification of four infectious bronchitis virus strains in China and analyses of their S1 glycoprotein gene. Vet. Microbiol. 122:61-71. 2007. (Pubitemid 46589910)
28. Yan, F., W. B. Yue, J. Liu, X. Y. Li, and Y. J. Zhao. Isolation and biological properties of avian infectious bronchitis virus isolated from Shanxi province. Chin. J. Vet. Sci. 2:845-848. 2009.
29. Yin, Z., and J. Liu. Animal virology, 2nd ed. Science Press, Beijing, China. 1997.
30. Yu, L., Z. Wang, Y. Jiang, S. Low, and J. Kwang. Molecular epidemiology of infectious bronchitis virus isolates from China and Southeast Asia. Avian Dis. 45:201-209. 2001. (Pubitemid 32285788)
31. Zou, N. L., F. F. Zhao, Y. P. Wang, P. Liu, S. J. Cao, X. T. Wen, and Y. Huang. Genetic analysis revealed LX4 genotype strains of avian infectious bronchitis virus became predominant in recent years in Sichuan area, China. Virus Genes 41:202-209. 2010.