Changes in gene expression during adaptation of Listeria monocytogenes to the soil environment

PLoS ONE

Volumn 6, Issue 9, 2011, Pages

  Piveteau, Pascal ^a,b   Depret, Géraldine ^a,b   Pivato, Barbara ^a,b   Garmyn, Dominique ^a,b   Hartmann, Alain ^a,b  

^a UNIVERSITÉ DE BOURGOGNE   (France)

^b CEMAGREF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ABC TRANSPORTER; BETA GLUCOSIDASE; CHITINASE; PHOSPHOENOLPYRUVATE; TRANSCRIPTOME;

ARTICLE; BACTERIAL GROWTH; CONTROLLED STUDY; DNA MICROARRAY; DNA MODIFICATION; ENERGY YIELD; EVOLUTIONARY ADAPTATION; GENE CONTROL; GENE EXPRESSION; GENETIC TRANSCRIPTION; INCUBATION TIME; INOCULATION; LISTERIA MONOCYTOGENES; MICROARRAY ANALYSIS; NONHUMAN; NUTRIENT SUPPLY; POLYMERASE CHAIN REACTION; SOIL; ADAPTATION; ECOSYSTEM; ENVIRONMENT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; MICROBIOLOGY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TIME;

LISTERIA MONOCYTOGENES;

ADAPTATION, PHYSIOLOGICAL; ECOSYSTEM; ENVIRONMENT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, DEVELOPMENTAL; LISTERIA MONOCYTOGENES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SOIL; SOIL MICROBIOLOGY; TIME FACTORS; TRANSCRIPTOME;

EID: 80053106294     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0024881     Document Type: Article

References (45)

1. Vazquez-Boland JA, Kuhn M, Berche P, Chakraborty T, Dominguez-Bernal G, et al. (2001) Listeria pathogenesis and molecular virulence determinants. Clin Microbiol Rev 14: 584-640.
2. Hamon M, Bierne H, Cossart P, (2006) Listeria monocytogenes: a multifaceted model. Nat Rev Microbiol 4: 423-434.
3. Gray MJ, Freitag NE, Boor KJ, (2006) How the bacterial pathogen Listeria monocytogenes mediates the switch from environmental Dr. Jekyll to pathogenic Mr. Hyde. Infect Immun 74: 2505-2512.
4. Kathariou S, (2002) Listeria monocytogenes virulence and pathogenicity, a food safety perspective. J Food Prot 65: 1811-1829.
5. Nightingale KK, Schukken YH, Nightingale CR, Fortes ED, Ho AJ, et al. (2004) Ecology and transmission of Listeria monocytogenes infecting ruminants and in the farm environment. Appl Environ Microbiol 70: 4458-4467.
6. Garcia E, DePaz M, Rodriguez JL, Gaya P, Medina M, et al. (1996) Exogenous sources of Listeria contamination in raw ewe's milk. J Food Prot 59: 950-954.
7. Lyautey E, Hartmann A, Pagotto F, Tyler K, Lapen DR, et al. (2007) Characteristics and frequency of detection of fecal Listeria monocytogenes shed by livestock, wildlife, and humans. Can J Microbiol 53: 1158-1167.
8. Weis J, Seeliger HPR, (1975) Incidence of Listeria monocytogenes in nature. Appl Microbiol 30: 29-32.
9. Olier M, Pierre F, Rousseaux S, Lemaitre JP, Rousset A, et al. (2003) Expression of truncated internalin A is involved in impaired internalization of some Listeria monocytogenes isolates carried asymptomatically by humans. Infect Immun 71: 1217-1224.
10. Lyautey E, Lapen DR, Wilkes G, McCleary K, Pagotto F, et al. (2007) Distribution and characteristics of Listeria monocytogenes isolates from surface waters of the South Nation River watershed, Ontario, Canada. Appl Environ Microbiol 73: 5401-5410.
11. Aytac SA, Ben U, Cengiz C, Taban BM, (2010) Evaluation of Salmonella and Listeria monocytogenes contamination on leafy green vegetables. J Food Agric Environ 8: 275-279.
12. Welshimer HJ, (1968) Isolation of Listeria monocytogenes from vegetation. J Bacteriol 95 (2): 300-303.
13. Dowe MJ, Jackson ED, Mori JG, Bell CR, (1997) Listeria monocytogenes survival in soil and incidence in agricultural soils. J Food Prot 60: 1201-1207.
14. Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, et al. (2001) Comparative genomics of Listeria species. Science 294: 849-852.
15. Milohanic E, Glaser P, Coppee JY, Frangeul L, Vega Y, et al. (2003) Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA. Mol Microbiol 47: 1613-1625.
16. Hain T, Hossain H, Chatterjee SS, Machata S, Volk U, et al. (2008) Temporal transcriptomic analysis of the Listeria monocytogenes EGD-e sigmaB regulon. BMC microbiology 8: 20.
17. Abram F, Starr E, Karatzas KA, Matlawska-Wasowska K, Boyd A, et al. (2008) Identification of components of the sigma B regulon in Listeria monocytogenes that contribute to acid and salt tolerance. Appl Environ Microbiol 74: 6848-6858.
18. Nadon CA, Bowen BM, Wiedmann M, Boor KJ, (2002) Sigma B contributes to PrfA-mediated virulence in Listeria monocytogenes. Infect Immun 70: 3948-3952.
19. Garner MR, Njaa BL, Wiedmann M, Boor KJ, (2006) Sigma B contributes to Listeria monocytogenes gastrointestinal infection but not to systemic spread in the guinea pig infection model. Infect Immun 74: 876-886.
20. Bennett HJ, Pearce DM, Glenn S, Taylor CM, Kuhn M, et al. (2007) Characterization of relA and codY mutants of Listeria monocytogenes: identification of the CodY regulon and its role in virulence. Mol Microbiol 63: 1453-1467.
21. Chaturongakul S, Raengpradub S, Palmer ME, Bergholz TM, Orsi RH, et al. (2011) Transcriptomic and phenotypic analyses identify coregulated, overlapping regulons among PrfA, CtsR, HrcA, and the alternative sigma factors sigmaB, sigmaC, sigmaH, and sigmaL in Listeria monocytogenes. Appl Environ Microbiol 77: 187-200.
22. Hu Y, Oliver HF, Raengpradub S, Palmer ME, Orsi RH, et al. (2007) Transcriptomic and phenotypic analyses suggest a network between the transcriptional regulators HrcA and sigmaB in Listeria monocytogenes. Appl Environ Microbiol 73: 7981-7991.
23. Hu Y, Raengpradub S, Schwab U, Loss C, Orsi RH, et al. (2007) Phenotypic and transcriptomic analyses demonstrate interactions between the transcriptional regulators CtsR and sigma B in Listeria monocytogenes. Appl Environ Microbiol 73: 7967-7980.
24. Chan YC, Raengpradub S, Boor KJ, Wiedmann M, (2007) Microarray-Based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells. Appl Environ Microbiol 73: 6484-6498.
25. van der Veen S, Hain T, Wouters JA, Hossain H, de Vos WM, et al. (2007) The heat-shock response of Listeria monocytogenes comprises genes involved in heat shock, cell division, cell wall synthesis, and the SOS response. Microbiology-SGM 153: 3593-3607.
26. Raengpradub S, Wiedmann M, Boor KJ, (2008) Comparative analysis of the sigma(B)-dependent stress responses in Listeria monocytogenes and Listeria innocua strains exposed to selected stress conditions. Appl Environ Microbiol 74: 158-171.
27. Ledala N, Sengupta M, Muthaiyan A, Wilkinson BJ, Jayaswal RK, (2010) Transcriptomic response of Listeria monocytogenes to iron limitation and fur mutation. Appl Environ Microbiol 76: 406-416.
28. Camejo A, Buchrieser C, Couve E, Carvalho F, Reis O, et al. (2009) In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection. PLoS Pathog 5: e1000449 doi:10.1371/journal.ppat.1000449.
29. Toledo-Arana A, Dussurget O, Nikitas G, Sesto N, Guet-Revillet H, et al. (2009) The Listeria transcriptional landscape from saprophytism to virulence. Nature 459: 950-956.
30. Liu YH, Ream A, (2008) Gene expression profiling of Listeria monocytogenes strain F2365 during growth in ultrahigh-temperature-processed skim milk. Appl Environ Microbiol 74: 6859-6866.
31. Palumbo JD, Kaneko A, Nguyen KD, Gorski L, (2005) Identification of genes induced in Listeria monocytogenes during growth and attachment to cut cabbage, using differential display. Appl Environ Microbiol 71: 5236-5243.
32. Vanrenterghem B, Huysman F, Rygole R, Verstraete W, (1991) Detection and prevalence of Listeria monocytogenes in the agricultural ecosystem. J Appl Bacteriol 71: 211-217.
33. Welshimer HJ, (1960) Survival of Listeria monocytogenes in soil. J Bacteriol 80: 316-320.
34. Welshimer HJ, Donker-Voet J, (1971) Listeria monocytogenes in nature. Appl Microbiol 21: 516-519.
35. Stoll R, Goebel W, (2010) The major PEP-phosphotransferase systems (PTSs) for glucose, mannose and cellobiose of Listeria monocytogenes, and their significance for extra- and intracellular growth. Microbiology-SGM 156: 1069-1083.
36. Gopal S, Berg D, Hagen N, Schriefer EM, Stoll R, et al. (2010) Maltose and maltodextrin utilization by Listeria monocytogenes depend on an inducible ABC transporter which is repressed by glucose. PLos One 5: e10349 doi:10.1371/journal.pone.0010349.
37. Leisner JJ, Larsen MH, Jorgensen RL, Brondsted L, Thomsen LE, et al. (2008) Chitin hydrolysis by Listeria spp., including L. monocytogenes. Appl Environ Microbiol 74: 3823-3830.
38. Chaturongakul S, Boor KJ, (2006) sigma(B) activation under environmental and energy stress conditions in Listeria monocytogenes. Appl Environ Microbiol 72: 5197-5203.
39. Oliver HF, Orsi RH, Wiedmann M, Boor KJ, (2010) Listeria monocytogenes sigma(B) Has a small core regulon and a conserved role in virulence but makes differential contributions to stress tolerance across a diverse collection of strains. Appl Environ Microbiol 76: 4216-4232.
40. Gorski L, Duhe JM, Flaherty D, (2011) The Sigma B operon is a determinant of fitness for a Listeria monocytogenes Serotype 4b strain in soil. Foodborne pathogens and disease 8: 699-704.
41. Oliver HF, Orsi RH, Ponnala L, Keich U, Wang W, et al. (2009) Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs. BMC Genomics 10: 22.
42. Mandin PFH, Dussurget O, Vergassola M, Milohanic E, Toledo-Arana A, et al. (2005) VirR, a response regulator critical for Listeria monocytogenes virulence. Mol Microbiol 57: 1367-1380.
43. Park SF, Kroll RG, (1993) Expression of listeriolysin and phosphatidylinositol-specific phospholipase C is repressed by the plant-derived molecule cellobiose in Listeria monocytogenes. Mol Microbiol 8: 653-661.
44. McGann P, Ivanek R, Wiedmann M, Boor KJ, (2007) Temperature-dependent expression of Listeria monocytogenes internalin and internalin-like genes suggests functional diversity of these proteins among the listeriae. Appl Environ Microbiol 73: 2806-2814.
45. Rieu A, Weidmann S, Garmyn D, Piveteau P, Guzzo J, (2007) agr system of Listeria monocytogenes EGD-e: Role in adherence and differential expression pattern. Appl Environ Microbiol 73: 6125-6133.