-
1
-
-
78650320370
-
Dindel: Accurate indel calls from short-read data
-
October
-
Albers, C.A., et al.: Dindel: Accurate indel calls from short-read data. Genome Research (October 2010)
-
(2010)
Genome Research
-
-
Albers, C.A.1
-
3
-
-
77956193448
-
ProgressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
-
Darling, A.E., et al.: ProgressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement. PLoS ONE 5(6), e11147 (2010)
-
(2010)
PLoS ONE
, vol.5
, Issue.6
-
-
Darling, A.E.1
-
4
-
-
85030321143
-
MapReduce: Simplified data processing on large clusters
-
USENIX Association
-
Dean, J., Ghemawat, S.: MapReduce: Simplified data processing on large clusters. In: Proc. OSDI 2004, pp. 137-150. USENIX Association (2004)
-
(2004)
Proc. OSDI 2004
, pp. 137-150
-
-
Dean, J.1
Ghemawat, S.2
-
5
-
-
71449088969
-
Compressing and indexing labeled trees, with applications
-
article 4
-
Ferragina, P., et al.: Compressing and indexing labeled trees, with applications. Journal of the ACM 57(1), article 4 (2009)
-
(2009)
Journal of the ACM
, vol.57
, Issue.1
-
-
Ferragina, P.1
-
7
-
-
70449701942
-
Sense from sequence reads: Methods for alignment and assembly
-
Flicek, P., Birney, E.: Sense from sequence reads: methods for alignment and assembly. Nature Methods 6, S6-S12 (2009)
-
(2009)
Nature Methods
, vol.6
-
-
Flicek, P.1
Birney, E.2
-
8
-
-
33645796213
-
Compressed suffix arrays and suffix trees with applications to text indexing and string matching
-
Grossi, R., Vitter, J.S.: Compressed suffix arrays and suffix trees with applications to text indexing and string matching. SIAM Journal on Computing 35(2), 378-407 (2005)
-
(2005)
SIAM Journal on Computing
, vol.35
, Issue.2
, pp. 378-407
-
-
Grossi, R.1
Vitter, J.S.2
-
9
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander, E.S., et al.: Initial sequencing and analysis of the human genome. Nature 409(6822), 860-921 (2001)
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
-
10
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead, B., et al.: Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology 10(3), R25 (2009)
-
(2009)
Genome Biology
, vol.10
, Issue.3
-
-
Langmead, B.1
-
11
-
-
35648976118
-
The diploid genome sequence of an individual human
-
Levy, S., et al.: The diploid genome sequence of an individual human. PLoS Biol. 5(10), e254 (2007)
-
(2007)
PLoS Biol
, vol.5
, Issue.10
-
-
Levy, S.1
-
12
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H., Durbin, R.: Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 27(14), 1754-1760 (2009)
-
(2009)
Bioinformatics
, vol.27
, Issue.14
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
13
-
-
67650711615
-
SOAP2
-
Li, R., et al.: SOAP2. Bioinformatics 25(15), 1966-1967 (2009)
-
(2009)
Bioinformatics
, vol.25
, Issue.15
, pp. 1966-1967
-
-
Li, R.1
-
14
-
-
75649124547
-
De novo assembly of human genomes with massively parallel short read sequencing
-
Li, R., et al.: De novo assembly of human genomes with massively parallel short read sequencing. Genome Res. 20(2), 265-272 (2010)
-
(2010)
Genome Res
, vol.20
, Issue.2
, pp. 265-272
-
-
Li, R.1
-
15
-
-
77950788830
-
Storage and retrieval of highly repetitive sequence collections
-
Mäkinen, V., et al.: Storage and retrieval of highly repetitive sequence collections. Journal of Computational Biology 17(3), 281-308 (2010)
-
(2010)
Journal of Computational Biology
, vol.17
, Issue.3
, pp. 281-308
-
-
Mäkinen, V.1
-
16
-
-
78650487811
-
Unified view of backward backtracking in short read mapping
-
Elomaa, T., Mannila, H., Orponen, P. (eds.) Ukkonen Festschrift 2010. Springer, Heidelberg
-
Mäkinen, V., et al.: Unified view of backward backtracking in short read mapping. In: Elomaa, T., Mannila, H., Orponen, P. (eds.) Ukkonen Festschrift 2010. LNCS, vol. 6060, pp. 182-195. Springer, Heidelberg (2010)
-
(2010)
LNCS
, vol.6060
, pp. 182-195
-
-
Mäkinen, V.1
-
17
-
-
72849144434
-
Sequencing technologies - The next generation
-
Metzker, M.L.: Sequencing technologies - the next generation. Nature Reviews Genetics 11, 31-46 (2010)
-
(2010)
Nature Reviews Genetics
, vol.11
, pp. 31-46
-
-
Metzker, M.L.1
-
18
-
-
26844482093
-
A fine-scale map of recombination rates and hotspots across the human genome
-
Myers, S., et al.: A fine-scale map of recombination rates and hotspots across the human genome. Science 310(5746), 321-324 (2005)
-
(2005)
Science
, vol.310
, Issue.5746
, pp. 321-324
-
-
Myers, S.1
-
20
-
-
34147144193
-
A taxonomy of suffix array construction algorithms
-
Puglisi, S.J., et al.: A taxonomy of suffix array construction algorithms. ACM Computing Surveys 39(2), 4 (2007)
-
(2007)
ACM Computing Surveys
, vol.39
, Issue.2
, pp. 4
-
-
Puglisi, S.J.1
-
21
-
-
0036940872
-
A novel approach to remote homology detection: Jumping alignments
-
Spang, R., et al.: A novel approach to remote homology detection: Jumping alignments. Journal of Computational Biology 9(5), 747-760 (2002)
-
(2002)
Journal of Computational Biology
, vol.9
, Issue.5
, pp. 747-760
-
-
Spang, R.1
-
22
-
-
0035895505
-
The sequence of the human genome
-
Venter, J.C., et al.: The sequence of the human genome. Science 291(5507), 1304-1351 (2001)
-
(2001)
Science
, vol.291
, Issue.5507
, pp. 1304-1351
-
-
Venter, J.C.1
-
23
-
-
42249087308
-
The complete genome of an individual by massively parallel DNA sequencing
-
Wheeler, D.A., et al.: The complete genome of an individual by massively parallel DNA sequencing. Nature 452(7189), 872-876 (2008)
-
(2008)
Nature
, vol.452
, Issue.7189
, pp. 872-876
-
-
Wheeler, D.A.1
|