Sequencing and transcriptional analysis of the biosynthesis gene cluster of putrescine-producing Lactococcus lactis

Applied and Environmental Microbiology

Volumn 77, Issue 18, 2011, Pages 6409-6418

  Ladero, Victor ^a   Rattray, Fergal P ^b   Mayo, Baltasar ^a   Martín, María Cruz ^a   Fernández, María ^a   Alvarez, Miguel A ^a  

^a DEPARTMENT OF MICROBIOLOGY AND BIOCHEMISTRY OF DAIRY PRODUCTS   (Spain)

^b CHR HANSEN A S   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

AGMATINE; BIOGENIC AMINES; BIOSYNTHESIS GENE CLUSTER; CATABOLIC ENZYMES; FLANKING REGIONS; GENOME EVOLUTION; HISTORY OF USE; LACTIC ACID BACTERIA; LACTIS STRAIN; LACTOCOCCUS LACTIS; PROKARYOTIC MICROORGANISM; REGULATORY GENES; TOXIC EFFECT; TRANSCRIPTIONAL ANALYSIS;

BIOCHEMISTRY; GENE ENCODING; LACTIC ACID;

TRANSCRIPTION;

AGMATINE; AGMATINE DEIMINASE; BACTERIAL DNA; HYDROLASE; PRIMER DNA; PUTRESCINE;

AMMONIA; BACTERIUM; CARBOXYLIC ACID; CATABOLISM; CLUSTER ANALYSIS; ENZYME ACTIVITY; FERMENTATION; GENE EXPRESSION; GENOME; IDENTIFICATION METHOD; NUMERICAL MODEL; PHENOTYPE; POLYMERASE CHAIN REACTION; TOXIC SUBSTANCE;

ARTICLE; BIOSYNTHESIS; CHEMISTRY; DNA SEQUENCE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE ORDER; GENETIC TRANSCRIPTION; GENETICS; LACTOCOCCUS LACTIS; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; MULTIGENE FAMILY; OPERON; POLYMERASE CHAIN REACTION; TRANSPOSON;

AGMATINE; BIOSYNTHETIC PATHWAYS; DNA PRIMERS; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, BACTERIAL; GENE ORDER; HYDROLASES; LACTOCOCCUS LACTIS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; MUTAGENESIS, INSERTIONAL; OPERON; POLYMERASE CHAIN REACTION; PUTRESCINE; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION, GENETIC;

LACTOCOCCUS LACTIS; PROKARYOTA;

EID: 80052815937     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.05507-11     Document Type: Article

References (36)

1. Bover-Cid, S., and W. H. Holzapfel. 1999. Improved screening procedure for biogenic amine production by lactic acid bacteria. Int. J. Food Microbiol. 53:33-41.
2. Burdychova, R., and T. Komprda. 2007. Biogenic amine-forming microbial communities in cheese. FEMS Microbiol. Lett. 276:149-155.
3. Calles-Enríquez, M., et al. 2010. Sequencing and trancriptional analysis of Streptococcus thermophilus histamine biosynthesis gene cluster: factors that affect differential hdcA expression. Appl. Environ. Microbiol. 76:6231-6238.
4. Chopin, A., M.-C. Chopin, A. Moillot-Batt, and P. Langella. 1984. Two plasmid-determined restriction and modification systems in Streptococcus lactis. Plasmid 11:260-263.
5. Costantini, A., E. Vaudano, V. D. Prete, M. Danei, and E. García-Moruno. 2009. Biogenic amine production by contaminating bacteria found in starter preparations used in winemaking. J. Agric. Food Chem. 57:10664-10669.
6. Coton, E., and M. Coton. 2009. Evidence of horizontal transfer as origin of strain to strain variation of the tyramine production trait in Lactobacillus brevis. Food Microbiol. 26:52-57.
7. Coton, M., et al. 2010. Occurrence of biogenic amine-forming lactic acid bacteria in wine and cider. Food Microbiol. 27:1078-1085.
8. Courtney, P. D. 2000. Lactococcus lactis subspecies lactis and cremoris, p. 1166-1171. In R. K. Robinson (ed.), Encyclopedia of food microbiology, 1st ed. Elsevier, Amsterdam, the Netherlands.
9. Fernández, M., D. M. Linares, B. del Río, V. Ladero, and M. A. Alvarez. 2007. HPLC quantification of biogenic amines in cheeses: correlation with PCR-detection of tyramine-producing microorganisms. J. Dairy Res. 74:276-282.
10. García-Moruno, E., A. V. Carrascosa, and R. Muñoz. 2005. A rapid and inexpensive method for the determination of biogenic amines from bacterial cultures by thin-layer chromatography. J. Food Prot. 68:625-629.
11. Gasson, M. J. 1983. Plasmid complements of Streptococcus lactis NCDO 712 and other lactic streptococci after protoplast-induced curing. J. Bacteriol. 154:1-9.
12. Griswold, A. R., Y. Y. Chen, and R. A. Burne. 2004. Analysis of an agmatine deiminase gene cluster in Streptococcus mutans UA159. J. Bacteriol. 186:1902-1904.
13. Kelly, W. J., L. J. Ward, and S. C. Leahy. 2010. Chromosomal diversity in Lactococcus lactis and the origin of dairy starter cultures. Genome Biol. Evol. 2:729-744.
14. Kok, J., G. Buist, A. L. Zomer, S. A. F. T. van Hijum, and O. P. Kuipers. 2005. Comparative and functional genomics of lactococci. FEMS Microbiol. Rev. 29:411-433.
15. Krause, I., A. Bockhardt, H. Neckermann, T. Henleand, and H. Klostermeyer. 1995. Simultaneous determination of amino acids and biogenic amines by reversed phase high-performance liquid chromatography of the dabsyl derivatives. J. Chromatogr. A 715:67-79.
16. Ladero, V., D. M. Linares, M. Fernández, and M. A. Alvarez. 2008. Real time quantitative PCR detection of histamine-producing lactic acid bacteria in cheese: relation with histamine content. Food Res. Int. 41:1015-1019.
17. Ladero, V., E. Sánchez-Llana, M. Fernández, and M. A. Alvarez. 2011. Survival of biogenic amine-producing dairy LAB strains at pasteurisation conditions. Int. J. Food Sci. Technol. 46:516-521.
18. Ladero, V., M. Calles-Enríquez, M. Fernández, and M. A. Alvarez. 2010. Toxicological effects of dietary biogenic amines. Curr. Nutr. Food Sci. 6:145-156.
19. Ladero, V., et al. 2011. Biogenic amines content in Spanish and French natural ciders: application of qPCR for quantitative detection of biogenic amine-producers. Food Microbiol. 28:554-561.
20. Ladero, V., M. Fernández, and M. A. Alvarez. 2009. Effect of post-ripening processing on the histamine and histamine-producing bacteria contents of different cheeses. Int. Dairy J. 19:759-762.
21. Ladero, V., M. Fernández, I. Cuesta, and M. A. Alvarez. 2010. Quantitative detection and identification of tyramine-producing enterococci and lactobacilli in cheese by multiplex qPCR. Food Microbiol. 27:933-939.
22. Landete, J. M., S. Ferrer, and I. Pardo. 2005. Which lactic acid bacteria are responsible for histamine production in wine? J. Appl. Microbiol. 99:580-586.
23. Lane, D. J. 1991. 16S/23S rRNA sequencing, p. 115-147. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley & Sons, New York, NY.
24. Linares, D. M., M. Martín, V. Ladero, M. A. Alvarez, and M. Fernández. 2011. Biogenic amines in dairy products. Crit. Rev. Food. Sci. Nutr. 51:691-703.
25. Linares, D. M., M. Fernández, M. C. Martín, and M. A. Alvarez. 2009. Tyramine biosynthesis in Enterococcus durans is transcriptionally regulated by the extracellular pH and tyrosine concentration. Microb. Biotechnol. 2:625-633.
26. Lucas, P. M., et al. 2007. Agmatine deiminase pathway genes in Lactobacillus brevis are linked to the tyrosine decarboxylation operon in a putative acid resistance locus. Microbiology 153:2221-2230.
27. Marcobal, A., B. de las Rivas, M. V. Moreno-Arribas, and R. Muñoz. 2004. Identification of the ornithine decarboxylase gene in the putrescine-producer Oenococcus oeni BIFI-83. FEMS Microbiol. Lett. 239:213-220.
28. Marcobal, A., B. de las Rivas, M. V. Moreno-Arribas, and R. Muñoz. 2006. Evidence for horizontal gene transfer as origin of putrescine production in Oenococcus oeni BIFI-83. Appl. Environ. Microbiol. 72:7954-7958.
29. Momany, C., S. Ernst, R. Ghosh, N. L. Chang, and M. L. Hackert. 1995. Crystallographic structure of a PLP-dependent ornithine decarboxylase from Lactobacillus 30a to 3.0 Å resolution. J. Mol. Biol. 252:643-655.
30. Novella-Rodríguez, S., M. T. Veciana-Nogués, A. Roig-Sagués, A. Trujillo- Mesa, and M. C. Vidal-Carou. 2002. Influence of starter and non starter bacteria on the formation of biogenic amines in goat cheese during ripening. J. Dairy Sci. 85:2471-2478.
31. Passerini, D., et al. 2010. Genes but not genomes reveal bacterial domestication of Lactococcus lactis. PLoS One 5:e15306.
32. Sahm, D. F., et al. 1989. In vitro susceptibility studies of vancomycin-resistant Enterococcus faecalis. Antimicrob. Agents Chemother. 33:1588-1591.
33. Salama, M. S., W. E. Sandine, and S. J. Giovannoni. 1991. Development and application of oligonucleotide probes for identification of Lactococcus lactis subsp. cremoris. Appl. Environ. Microbiol. 57:1313-1318.
34. Sambrook, J., and D. W. Russell. 2001. Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
35. Smit, G., B. A. Smit, and W. J. Engels. 2005. Flavour formation by lactic acid bacteria and biochemical flavour profiling of cheese products. FEMS Microbiol. Rev. 29:591-610.
36. Wegmann, U., et al. 2007. Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363. J. Bacteriol. 189:3256-3270.