CrdS and crdA comprise a two-component system that is cooperatively regulated by the che3 chemosensory system in myxococcus xanthus

mBio

Volumn 2, Issue 4, 2011, Pages

  Willett, Jonathan W ^a   Kirby, John R ^a  

^a UNIVERSITY OF IOWA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHE3 PROTEIN; CHEA3 PROTEIN; CRDA PROTEIN; CRDS PROTEIN; PHOSPHATASE; PHOSPHOTRANSFERASE; UNCLASSIFIED DRUG;

ARTICLE; AUTOPHOSPHORYLATION; CONTROLLED STUDY; ENZYME PHOSPHORYLATION; ENZYME SPECIFICITY; EPISTASIS; IN VITRO STUDY; MYXOCOCCUS XANTHUS; NONHUMAN; PRIORITY JOURNAL; PROTEIN FUNCTION; SIGNAL TRANSDUCTION;

MYXOCOCCUS XANTHUS;

EID: 80052568134     PISSN: None     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.00110-11     Document Type: Article

References (41)

1. Stock AM, Robinson VL, Goudreau PN. 2000. Two-component signal transduction. Annu. Rev. Biochem. 69:183-215.
2. Skerker JM, Prasol MS, Perchuk BS, Biondi EG, Laub MT. 2005. Two-component signal transduction pathways regulating growth and cell cycle progression in a bacterium: a system-level analysis. PLoS Biol. 3:e334.
3. Laub MT, Biondi EG, Skerker JM. 2007. Phosphotransfer profiling: systematic mapping of two-component signal transduction pathways and phosphorelays. Methods Enzymol. 423:531-548.
4. Laub MT, Goulian M. 2007. Specificity in two-component signal transduction pathways. Annu. Rev. Genet. 41:121-145.
5. Siryaporn A, Goulian M. 2010. Characterizing cross-talk in vivo: avoiding pitfalls and overinterpretation. Methods Enzymol. 471:1-16.
6. Gao R, Stock AM. 2009. Biological insights from structures of twocomponent proteins. Annu. Rev. Microbiol. 63:133-154.
7. Russo FD, Silhavy TJ. 1991. EnvZ controls the concentration of phosphorylated OmpR to mediate osmoregulation of the porin genes. J. Mol. Biol. 222:567-580.
8. Huynh TN, Noriega CE, Stewart V. 2010. Conserved mechanism for sensor phosphatase control of two-component signaling revealed in the nitrate sensor NarX. Proc. Natl. Acad. Sci. U. S. A. 107:21140-21145.
9. Baker MD, Wolanin PM, Stock JB. 2006. Signal transduction in bacterial chemotaxis. Bioessays 28:9-22.
10. Kroos L. 2007. The Bacillus and Myxococcus developmental networks and their transcriptional regulators. Annu. Rev. Genet. 41:13-39.
11. Laub MT, Shapiro L, McAdams HH. 2007. Systems biology of Caulobacter. Annu. Rev. Genet. 41:429-441.
12. Ulrich LE, Zhulin IB. 2010. The MiST2 database: a comprehensive genomics resource on microbial signal transduction. Nucleic Acids Res. 38(Suppl. 1):D401-D407.
13. Wuichet K, Zhulin IB. 2010. Origins and diversification of a complex signal transduction system in prokaryotes. Sci. Signal. 3:ra50.
14. Kirby JR. 2009. Chemotaxis-like regulatory systems: unique roles in diverse bacteria. Annu. Rev. Microbiol. 63:45-59.
15. Porter SL, Wadhams GH, Armitage JP. 2011. Signal processing in complex chemotaxis pathways. Nat. Rev. Microbiol. 9:153-165.
16. Berleman JE, Bauer CE. 2005. Involvement of a Che-like signal transduction cascade in regulating cyst cell development in Rhodospirillum centenum. Mol. Microbiol. 56:1457-1466.
17. Hickman JW, Tifrea DF, Harwood CS. 2005. A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels. Proc. Natl. Acad. Sci. U. S. A. 102:14422-14427.
18. Kirby JR, Zusman DR. 2003. Chemosensory regulation of developmental gene expression in Myxococcus xanthus. Proc. Natl. Acad. Sci. U. S. A. 100:2008-2013.
19. Huntley S, et al. 2011. Comparative genomic analysis of fruiting body formation in Myxococcales. Mol. Biol. Evol. 28:1083-1097.
20. Magasanik B. 1989. Regulation of transcription of the glnALG operon of Escherichia coli by protein phosphorylation. Biochimie 71:1005-1012.
21. Xu Q, Black WP, Ward SM, Yang Z. 2005. Nitrate-dependent activation of the Dif signaling pathway of Myxococcus xanthus mediated by a NarXDifA interspecies chimera. J. Bacteriol. 187:6410-6418.
22. Wu SS, Kaiser D. 1997. Regulation of expression of the pilA gene in Myxococcus xanthus. J. Bacteriol. 179:7748-7758.
23. Magrini V, Creighton C, Youderian P. 1999. Site-specific recombination of temperate Myxococcus xanthus phage Mx8: genetic elements required for integration. J. Bacteriol. 181:4050-4061.
24. Smith JG, et al. 2004. A search for amino acid substitutions that universally activate response regulators. Mol. Microbiol. 51:887-901.
25. Hecht GB, Lane T, Ohta N, Sommer JM, Newton A. 1995. An essential single domain response regulator required for normal cell division and differentiation in Caulobacter crescentus. EMBO J. 14:3915-3924.
26. Noriega CE, Schmidt R, Gray MJ, Chen LL, Stewart V. 2008. Autophosphorylation and dephosphorylation by soluble forms of the nitrateresponsive sensors NarX and NarQ from Escherichia coli K-12. J. Bacteriol. 190:3869-3876.
27. Albanesi D, Mansilla MC, de Mendoza D. 2004. The membrane fluidity sensor DesK of Bacillus subtilis controls the signal decay of its cognate response regulator. J. Bacteriol. 186:2655-2663.
28. Gutu AD, Wayne KJ, Sham LT, Winkler ME. 2010. Kinetic characterization of the WalRKSpn (VicRK) two-component system of Streptococcus pneumoniae: dependence of WalKSpn (VicK) phosphatase activity on its PAS domain. J. Bacteriol. 192:2346-2358.
29. Grimshaw CE., et al. 1998. Synergistic kinetic interactions between components of the phosphorelay controlling sporulation in Bacillus subtilis. Biochemistry 37:1365-1375.
30. Forst S, Delgado J, Inouye M. 1989. Phosphorylation of OmpR by the osmosensor EnvZ modulates expression of the ompF and ompC genes in Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 86:6052-6056.
31. Black WP, Schubot FD, Li Z, Yang Z. 2010. Phosphorylation and dephosphorylation among Dif chemosensory proteins essential for exopolysaccharide regulation in Myxococcus xanthus. J. Bacteriol. 192: 4267-4274.
32. Caberoy NB, Welch RD, Jakobsen JS, Slater SC, Garza AG. 2003. Global mutational analysis of NtrC-like activators in Myxococcus xanthus: identifying activator mutants defective for motility and fruiting body development. J. Bacteriol. 185:6083-6094.
33. Lukat GS, McCleary WR, Stock AM, Stock JB. 1992. Phosphorylation of bacterial response regulator proteins by low molecular weight phosphodonors. Proc. Natl. Acad. Sci. U. S. A. 89:718-722.
34. Feng J, et al. 1992. Role of phosphorylated metabolic intermediates in the regulation of glutamine synthetase synthesis in Escherichia coli. J. Bacteriol. 174:6061-6070.
35. Keener J, Kustu S. 1988. Protein kinase and phosphoprotein phosphatase activities of nitrogen regulatory proteins NTRB and NTRC of enteric bacteria: roles of the conserved amino-terminal domain of NTRC. Proc. Natl. Acad. Sci. U. S. A. 85:4976-4980.
36. Weiss V, Magasanik B. 1988. Phosphorylation of nitrogen regulator I (NRI) of Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 85:8919-8923.
37. Porter SL, Roberts MA, Manning CS, Armitage JP. 2008. A bifunctional kinase-phosphatase in bacterial chemotaxis. Proc. Natl. Acad. Sci. U. S. A. 105:18531-18536.
38. Inclán YF, Laurent S, Zusman DR. 2008. The receiver domain of FrzE, a CheA-CheY fusion protein, regulates the CheA histidine kinase activity and downstream signalling to the A- and S-motility systems of Myxococcus xanthus. Mol. Microbiol. 68:1328-1339.
39. Giglio KM, et al. A cascade of coregulating enhancer binding proteins initiates and propagates a multicellular developmental program. Proc. Natl. Acad. Sci. U. S. A., in press.
40. Lee B, Schramm A, Jagadeesan S, Higgs PI. 2010. Two-component systems and regulation of developmental progression in Myxococcus xanthus. Methods Enzymol. 471:253-278.
41. Camacho C, et al. 2009. BLAST+: architecture and applications. BMC Bioinformatics 10:421.