Species-specific expression variation of fish MYH14, an ancient vertebrate myosin heavy chain gene orthologue

Fisheries Science

Volumn 77, Issue 5, 2011, Pages 847-853

  Kinoshita, Shigeharu ^a   Siddique, Bhuiyan Sharmin ^a   Ceyhun, Saltuk Bugrahan ^b   Asaduzzaman, Md ^a   Asakawa, Shuichi ^a   Watabe, Shugo ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b ATATÜRK UNIVERSITY   (Turkey)

Author keywords

In situ hybridization; Medaka; Muscle formation; MYH14 (MYH7b); Myosin heavy chain; Torafugu; Zebrafish

Indexed keywords

DANIO RERIO; ORYZIAS; ORYZIINAE; TAKIFUGU RUBRIPES; VERTEBRATA;

EID: 80052411553     PISSN: 09199268     EISSN: 14442906     Source Type: Journal    
DOI: 10.1007/s12562-011-0375-2     Document Type: Article

References (36)

1. Berg JS, Powell BC, Cheney RE (2001) A millennial myosin census. Mol Biol Cell 12: 780-794.
2. Weiss A, McDonough D, Wertman B, Acakpo-Satchivi L, Montgomery K, Kucherlapati R, Leinwand L, Krauter K (1999) Organization of human and mouse skeletal myosin heavy chain gene clusters is highly conserved. Proc Natl Acad Sci USA 96: 2958-2963.
3. Weiss A, Schiaffino S, Leinwand LA (1999) Comparative sequence analysis of the complete human sarcomeric myosin heavy chain family: implications for functional diversity. J Mol Biol 290: 61-75.
4. Desjardins PR, Burkman JM, Shrager JB, Allmond LA, Stedman HH (2002) Evolutionary implications of three novel members of the human sarcomeric myosin heavy chain gene family. Mol Biol Evol 19: 375-393.
5. Rossi AC, Mammucari C, Argentini C, Reggiani C, Schiaffino S (2010) Two novel/ancient myosins in mammalian skeletal muscles: MYH14/7b and MYH15 are expressed in extraocular muscles and muscle spindles. J Physiol 588: 353-364.
6. van Rooij E, Liu N, Olson EN (2008) MicroRNAs flex their muscles. Trends Genet 24: 159-166.
7. van Rooij E, Quiat D, Johnson BA, Sutherland LB, Qi X, Richardson JA, Kelm RJ Jr, Olson EN (2009) A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance. Dev Cell 17: 662-673.
8. Bell ML, Buvoli M, Leinwand LA (2010) Uncoupling of expression of an intronic microRNA and its myosin host gene by exon skipping. Mol Cell Biol 30: 1937-1945.
9. Ikeda D, Ono Y, Snell P, Edwards YJ, Elgar G, Watabe S (2007) Divergent evolution of the myosin heavy chain gene family in fish and tetrapods: evidence from comparative genomic analysis. Physiol Genomics 32: 1-15.
10. Watabe S, Ikeda D (2006) Diversity of the pufferfish Takifugu rubripes fast skeletal myosin heavy chain genes. Comp Biochem Physiol D 1: 28-34.
11. Ikeda D, Clark MS, Liang CS, Snell P, Edwards YJK, Elgar G, Watabe S (2004) Genomic structural analysis of the pufferfish (Takifugu rubripes) skeletal muscle myosin heavy chain genes. Mar Biotechnol 6: S462-S467.
12. McGuigan K, Phillips PC, Postlethwait JH (2004) Evolution of sarcomeric myosin heavy chain genes: evidence from fish. Mol Biol Evol 21: 1042-1056.
13. Akolkar DB, Kinoshita S, Yasmin L, Ono Y, Ikeda D, Yamaguchi H, Nakaya M, Erdogan O, Watabe S (2010) Fibre type-specific expression patterns of myosin heavy chain genes in adult torafugu Takifugu rubripes muscles. J Exp Biol 213: 137-145.
14. Darby IA, Bisucci T, Desmouliere A, Hewitson TD (2006) In situ hybridisation using cRNA probes: isotopic and nonisotopic detection methods. Methods Mol Biol 326: 17-31.
15. Westerfield M (1993) The zebrafish book. A guide for the laboratory use of zebrafish (Danio rerio). University of Oregon Press, Eugene.
16. Garriock RJ, Meadows SM, Krieg PA (2005) Developmental expression and comparative genomic analysis of Xenopus cardiac myosin heavy chain genes. Dev Dyn 233: 1287-1293.
17. Devoto SH, Melancon E, Eisen JS, Westerfield M (1996) Identification of separate slow and fast muscle precursor cells in vivo, prior to somite formation. Development 122: 3371-3380.
18. van Raamsdonk W, van't Veer L, Veeken K, Heyting C, Pool CW et al (1982) Differentiation of muscle fiber types in the teleost Brachiodanio rerio, the zebrafish posthaching development. Anat Embryol 164: 51-62.
19. Bryson-Richardson RJ, Currie PD (2008) The genetics of vertebrate myogenesis. Nat Rev Genet 9: 632-646.
20. Ikeda D, Nihei Y, Ono Y, Watabe S (2010) Three embryonic myosin heavy chain genes encoding different motor domain structures from common carp show distinct expression patterns in cranial muscle. Mar Genomics 3: 1-9.
21. Christoffels A, Koh EG, Chia JM, Brenner S, Aparicio S, Venkatesh B (2004) Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes. Mol Biol Evol 21: 1146-1151.
22. Vandepoele K, De Vos W, Taylor JS, Meyer A, van de Peer Y (2004) Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates. Proc Natl Acad Sci USA 101: 1638-1643.
23. Kikuchi K, Muramatsu M, Hirayama Y, Watabe S (1999) Characterization of the carp myosin heavy chain multigene family. Gene 228: 189-196.
24. Muramatsu-Uno M, Kikuchi K, Suetake H, Ikeda D, Watabe S (2005) The complete genomic sequence of the carp fast skeletal myosin heavy chain gene. Gene 349: 143-151.
25. Liang CS, Kobiyama A, Shimizu A, Sasaki T, Asakawa S, Shimizu N, Watabe S (2007) Fast skeletal muscle myosin heavy chain gene cluster of medaka Oryzias latipes enrolled in temperature adaptation. Physiol Genomics 29: 201-214.
26. Ikeda D, Toramoto T, Ochiai Y, Suetake H, Suzuki Y, Minoshima S, Shimizu N, Watabe S (2003) Identification of novel tropomyosin 1 gene of pufferfish (Fugu rubripes) on genomic sequences and tissue distribution of their transcripts. Mol Biol Rep 30: 83-90.
27. Toramoto T, Ikeda D, Ochiai Y, Minoshima S, Shimizu N, Watabe S (2004) Multiple gene organization of pufferfish Fugu rubripes tropomyosin isoforms and tissue distribution of their transcripts. Gene 331: 41-51.
28. Bryson-Richardson RJ, Daggett DF, Cortes F, Neyt C, Keenan DG, Currie PD (2005) Myosin heavy chain expression in zebrafish and slow muscle composition. Dev Dyn 233: 1018-1022.
29. Ton C, Hwang DM, Dempsey AA, Tang HC, Yoon J, Lim M, Mably JD, Fishman MC, Liew CC (2000) Identification, characterization, and mapping of expressed sequence tags from an embryonic zebrafish heart cDNA library. J Genome Res 10: 1915-1927.
30. Ono Y, Liang C, Ikeda D, Watabe S (2006) cDNA cloning of myosin heavy chain genes from medaka Oryzias latipes embryos and larvae and their expression patterns during development. Dev Dyn 235: 3092-3101.
31. Watabe S (2002) Temperature plasticity of contractile proteins in fish muscle. J Exp Biol 205: 2231-2236.
32. Johnston IA (2006) Environment and plasticity of myogenesis in teleost fish. J Exp Biol 209: 2249-2264.
33. Hagiwara N, Ma B, Ly A (1996) Slow and fast fibre isoform gene expression is systematically altered in skeletal muscle of the Sox6 mutant, p100H. Dev Dyn 234: 301-311.
34. Hagiwara N, Yeh M, Liu A (1996) Sox6 is required for normal fibre type differentiation of fetal skeletal muscle in mice. Dev Dyn 236: 2062-2076.
35. von Hofsten J, Elworthy S, Gilchrist MJ, Smith JC, Wardle FC, Ingham PW (2008) Prdm1- and Sox6-mediated transcriptional repression specifies muscle fibre type in the zebrafish embryo. EMBO Rep 9: 683-689.
36. Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH (2006) Cloning and expression of new microRNAs from zebrafish. Nucleic Acid Res 34: 2558-2569.