AtNG1 encodes a protein that is required for seed germination

Plant Science

Volumn 181, Issue 4, 2011, Pages 457-464

  Yang, Libo ^a   Peng, Xiongbo ^a   Sun, Meng xiang ^a  

^a WUHAN UNIVERSITY   (China)

Author keywords

Arabidopsis; Embryo root; Mitochondria; PPR protein; Seed germination

Indexed keywords

ARABIDOPSIS PROTEIN; MITOCHONDRIAL PROTEIN; NG1 PROTEIN, ARABIDOPSIS;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CELL FRACTIONATION; CHEMISTRY; CYTOLOGY; GENE EXPRESSION REGULATION; GENETIC COMPLEMENTATION; GENETICS; GERMINATION; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR GENETICS; MUTATION; ONION; PHYSIOLOGY; PLANT GENE; PLANT SEED;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GENETIC COMPLEMENTATION TEST; GERMINATION; MITOCHONDRIAL PROTEINS; MOLECULAR SEQUENCE DATA; MUTATION; ONIONS; REPETITIVE SEQUENCES, AMINO ACID; SEEDS; SUBCELLULAR FRACTIONS;

ARABIDOPSIS; EUKARYOTA;

EID: 80052326479     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2011.07.011     Document Type: Article

References (37)

1. Lurin C., Andrés C., Aubourg S., Bellaoui M., Bitton F., Bruyère C., Caboche M., Debast C., Gualberto J., Hoffmann B., et al. Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis. Plant Cell 2004, 16(8):2089-2103.
2. Small I.D., Peeters N. The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem. Sci. 2000, 25(2):46-47.
3. Schmitz-Linneweber C., Small I.D. Pentatricopeptide repeat proteins: a socket set for organelle gene expression. Trends Plant Sci. 2008, 13(12):663-670.
4. O'Toole N., Hattori M., Andres C., Iida K., Lurin C., Schmitz-Linneweber C., Sugita M., Small I.D. On the expansion of the pentatricopeptide repeat gene family in plants. Mol. Biol. Evol. 2008, 25(6):1120-1128.
5. Desloire S., Gherbi H., Laloui W., Marhadour S., Clouet V., Cattolico L., Falentin C., Giancola S., Renard M., Budar F., et al. Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide-repeat protein family. EMBO Rep. 2003, 4(6):588-594.
6. Klein R.R, Klein P.E., Mullet J.E., Minx P., Rooney W.L., Schertz K.F. Fertility restorer locus Rf1 of sorghum (Sorghum bicolor L.) encodes a pentatricopeptide repeat protein not present in the colinear region of rice chromosome 12. Theor. Appl. Genet. 2005, 111(6):994-1012.
7. Bentolila S., Alfonso A.A., Hanson M.R. A pentatricopeptide repeat-containing gene restores fertility to cytoplasmic male-sterile plants. Proc. Natl. Acad. Sci. U.S.A. 2002, 99(16):10887-10892.
8. Wang Z., Zou Y., Li X., Zhang Q., Chen L., Wu H., Su D., Chen Y., Guo J., Luo D., et al. Cytoplasmic male sterility of rice with boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing. Plant Cell 2006, 18(3):676-687.
9. Akagi H., Nakamura A., Yokozeki-Misono Y., Inagaki A., Takahashi H., Mori K., Fujimura T. Positional cloning of the rice Rf-1 gene, a restorer of BT-type cytoplasmic male sterility that encodes a mitochondria-targeting PPR protein. Theor. Appl. Genet. 2004, 108(8):1449-1457.
10. Cushing D.A., Forsthoefel N.R., Gestaut D.R., Vernon D.M. Arabidopsis emb175 and other ppr knockout mutants reveal essential roles for pentatricopeptide repeat (PPR) proteins in plant embryogenesis. Planta 2005, 221(3):424-436.
11. Ding Y.H., Liu N.Y., Tang Z.S., Liu J., Yang W.C. Arabidopsis GLUTAMINE-RICH PROTEIN23 is essential for early embryogenesis and encodes a novel nuclear PPR motif protein that interacts with RNA polymerase II subunit III. Plant Cell 2006, 18(4):815-830.
12. Bryant N., Lloyd J., Sweeney C., Myouga F., Meinke D. Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. Plant Physiol. 2011, 155:1678-1689.
13. McElver J., Tzafrir I., Aux G., Rogers R., Ashby C., et al. Insertional mutagenesis of genes required for seed development in Arabidopsis thaliana. Plant Physiol. 2001, 159:1751-1763.
14. Meinke D., Muralla R., Sweeney C., Dickerman A. Identifying essential genes in Arabidopsis thaliana. Trends Plant Sci. 2008, 13(9):483-491.
15. Tzafrir I., Pena-Muralla R., Dickerman A., Berg M., Rogers R., et al. Identification of genes required for embryo development in Arabidopsis. Plant Physiol. 2004, 135:1206-1220.
16. Meinke D.W., Meinke L.K., Showalter T.C., Schissel A.M., Mueller L.A., Tzafrir I. A sequence-based map of Arabidopsis genes with mutant phenotypes. Plant Physiol. 2004, 13:409-418.
17. de Longevialle A.F., Meyer E.H., Andrés C., Taylor N.L., Lurin C., Millar A.H., Small I.D. The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana. Plant Cell 2007, 19(10):3256-3265.
18. Kim S.R., Yang J.I., Moon S., Ryu C.H., An K., Kim K.M., Yim J., An G. Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria. Plant J. 2009, 59(5):738-749.
19. Zsigmond L., Rigo G., Szarka A., Szekely G., Otvos K., Darula Z., Medzihradszky K.F., Koncz C., Koncz Z., Szabados L. Arabidopsis PPR40 connects abiotic stress responses to mitochondrial electron transport. Plant Physiol. 2008, 146(4):1721-1737.
20. Finch-Savage W.E., Leubner-Metzger G. Seed dormancy and the control of germination. New Phytol. 2006, 171(3):501-523.
21. Santos-Mendoza M., Dubreucq B., Baud S., Parcy F., Caboche M., Lepiniec L. Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis. Plant J. 2008, 54:608-620.
22. Bewley J.D. Seed germination and dormancy. Plant Cell 1997, 9(7):1055-1066.
23. Murashige T., Skoog F. A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol. Plantarum 1962, 15(3):473-497.
24. Bechtold N., Pelletier G. In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration. Meth. Mol. Biol. (Clifton, NJ) 1998, 82:259-266.
25. Liu Y.G., Mitsukawa N., Oosumi T., Whittier R.F. Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 1995, 8(3):457-463.
26. Campbell R.E., Tour O., Palmer A.E., Steinbach P.A., Baird G.S., Zacharias D.A., Tsien R.Y. A monomeric red fluorescent protein. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:7877-7882.
27. Matsushima R., Hamamura Y., Higashiyama T., Arimura S., Sodmergen, Tsutsumi N., Sakamoto W. Mitochondrial dynamics in plant male gametophyte visualized by fluorescent live imaging. Plant Cell Physiol. 2008, 49(7):1074-1083.
28. Yang N.S., Burkholder J., Roberts B., Martinell B., McCabe D. In vivo and in vitro gene transfer to mammalian somatic cells by particle bombardment. Proc. Natl. Acad. Sci. U.S.A. 1990, 87(24):9568-9572.
29. Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22(22):4673-4680.
30. Brown G.G, Formanova N., Jin H., Wargachuk R., Dendy C., Patil P., Lafores M., Zhang J., Cheung W.Y., Landry B.S. The radish Rfo restorer gene of Ogura cytoplasmic male sterility encodes a protein with multiple pentatricopeptide repeats. Plant J. 2003, 35(2):262-272.
31. Koizuka N., Imai R., Fujimoto H., Hayakawa T., Kimura Y., Kohno-Murase J., Sakai T., Kawasaki S., Imamura J. Genetic characterization of a pentatricopeptide repeat protein gene, orf687, that restores fertility in the cytoplasmic male-sterile Kosena radish. Plant J. 2003, 34(4):407-415.
32. Christian J., Joachim F., Angela H., Sabine T., Stefan B. RNA PROCESSING FACTOR2 is required for 5' end processing of nad9 and cox3 mRNAs in mitochondria of Arabidopsis thaliana. Plant Cell 2010, 22:443-453.
33. Bewley J.D., Black M. Seeds Physiology of Development and Germination 1994, Plenum Press, New York.
34. Finch-Savage W.E., Leubner-Metzger G. Seed dormancy and the control of germination. New Phytol. 2006, 171:501-523.
35. Bettey M., Finch-Savage W.E. Respiratory enzyme activities during germination in Brassica seeds of different vigour. Seed Sci. Res. 1996, 6:165-173.
36. Benamar A., Tallon C., Macherel D. Membrane integrity and oxidation properties of mitochondria isolated from imbibing pea seeds after priming or accelerated aging. Seed Sci. Res. 2003, 13:35-45.
37. Catusse J., Strub J., Job C., Dorsselaer A.V., Job D. Proteome-wide characterization of sugarbeet seed vigor and its tissue specific expression. Proc. Natl. Acad. Sci. U.S.A. 2008, 105:10262-10267.