Dissimilarity-based classification of anatomical tree structures

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 6801 LNCS, Issue , 2011, Pages 475-485

  Sørensen, Lauge ^a   Lo, Pechin ^a   Dirksen, Asger ^b   Petersen, Jens ^a   De Bruijne, Marleen ^a,c  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b GENTOFTE UNIVERSITY HOSPITAL   (Denmark)

^c ERASMUS MEDICAL CENTER   (Netherlands)

Author keywords

dissimilarity representation; linear assignment; tree classification; tree dissimilarity measure

Indexed keywords

AIRWAY TREES; ANATOMICAL FEATURES; CHRONIC OBSTRUCTIVE PULMONARY DISEASE; CLASSIFICATION SCHEME; COMPUTED TOMOGRAPHY; DISSIMILARITY MEASURES; DISSIMILARITY REPRESENTATION; FEATURE VECTORS; LINEAR ASSIGNMENT; NOVEL METHODS; RECEIVER OPERATING CHARACTERISTIC CURVES; TREE CLASSIFICATION; TREE STRUCTURES;

COMPUTERIZED TOMOGRAPHY; DATA PROCESSING; MEDICAL IMAGING; TOMOGRAPHY; TREES (MATHEMATICS);

PLANT EXTRACTS;

ALGORITHM; ARTICLE; AUDIOVISUAL EQUIPMENT; AUTOMATED PATTERN RECOGNITION; COMPUTER ASSISTED DIAGNOSIS; COMPUTER ASSISTED TOMOGRAPHY; COMPUTER SIMULATION; HISTOLOGY; HUMAN; IMAGE ENHANCEMENT; IMAGE SUBTRACTION; INFORMATION RETRIEVAL; LUNG; METHODOLOGY; RADIOGRAPHY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY;

ALGORITHMS; COMPUTER SIMULATION; HUMANS; IMAGE ENHANCEMENT; IMAGE INTERPRETATION, COMPUTER-ASSISTED; INFORMATION STORAGE AND RETRIEVAL; LUNG; MODELS, ANATOMIC; PATTERN RECOGNITION, AUTOMATED; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SUBTRACTION TECHNIQUE; TOMOGRAPHY, X-RAY COMPUTED;

EID: 80052314901     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-22092-0_39     Document Type: Conference Paper

References (22)

1. Achenbach, T., Weinheimer, O., Biedermann, A., Schmitt, S., Freudenstein, D., Goutham, E., Kunz, R.P., Buhl, R., Dueber, C., Heussel, C.P.: MDCT assessment of airway wall thickness in COPD patients using a new method: correlations with pulmonary function tests. Eur. Radiol. 18(12), 2731-2738 (2008), http://dx.doi.org/10.1007/s00330-008-1089-4
2. Arzhaeva, Y., Hogeweg, L., de Jong, P.A., Viergever, M.A., de Ginneken, B.v.: Global and local multi-valued dissimilarity-based classification: Application to computer-aided detection of tuberculosis. In: Yang, G.-Z., Hawkes, D., Rueckert, D., Noble, A., Taylor, C. (eds.) MICCAI 2009. LNCS, vol. 5761, pp. 724-731. Springer, Heidelberg (2009)
3. Bille, P.: A survey on tree edit distance and related problems. Theor. Comput. Sci. 337, 217-239 (2005), http://dx.doi.org/10.1016/j.tcs.2004.12.030
4. DeLong, E.R., DeLong, D.M., Clarke-Pearson, D.L.: Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach. Biometrics 44(3), 837-845 (1988)
5. Feragen, A., Lauze, F., Lo, P., de Bruijne, M., Nielsen, M.: Geometries on spaces of treelike shapes. In: Kimmel, R., Klette, R., Sugimoto, A. (eds.) ACCV 2010, Part II. LNCS, vol. 6493, pp. 160-173. Springer, Heidelberg (2011)
6. Hasegawa, M., Makita, H., Nasuhara, Y., Odajima, N., Nagai, K., Ito, Y., Betsuyaku, T., Nishimura, M.: Relationship between improved airflow limitation and changes in airway calibre induced by inhaled anticholinergic agents in COPD. Thorax 64(4), 332-338 (2009), http://dx.doi.org/10.1136/thx.2008.103671
7. Hasegawa, M., Nasuhara, Y., Onodera, Y., Makita, H., Nagai, K., Fuke, S., Ito, Y., Betsuyaku, T., Nishimura, M.: Airflow limitation and airway dimensions in chronic obstructive pulmonary disease. Am J Respir Crit Care Med 173(12), 1309-1315 (2006), http://dx.doi.org/10.1164/rccm.200601-037OC
8. Heneghan, C., Flynn, J., O'Keefe, M., Cahill, M.: Characterization of changes in blood vessel width and tortuosity in retinopathy of prematurity using image analysis. Med. Image Anal. 6(4), 407-429 (2002)
9. Kasahara, K., Shiba, K., Ozawa, T., Okuda, K., Adachi, M.: Correlation between the bronchial subepithelial layer and whole airway wall thickness in patients with asthma. Thorax 57(3), 242-246 (2002)
10. Kittler, J., Alkoot, F.M.: Moderating k-NN classifiers. Pattern Analysis and Applications 5(3), 326-332 (2002)
11. Lo, P., van Ginneken, B., Reinhardt, J., de Bruijne, M.: Extraction of airways from CT (EXACT 2009). In: Brown, M., de Bruijne, M., van Ginneken, B., Kiraly, A., Kuhnigk, J.M., Lorenz, C., McClelland, J., Mori, K., Reeves, A., Reinhardt, J. (eds.) Proc. of The Second International Workshop on Pulmonary Image Analysis (2009)
12. Nakano, Y., Wong, J.C., de Jong, P.A., Buzatu, L., Nagao, T., Coxson, H.O., Elliott, W.M., Hogg, J.C.: The prediction of small airway dimensions using computed tomography. Am. J. Respir. Crit. Care Med. 171(2), 142-146 (2005), http://dx.doi.org/10.1164/rccm.200407-874OC
13. Patel, B.D., Coxson, H.O., Pillai, S.G., Agustí, A.G.N., Calverley, P.M.A., Donner, C.F., Make, B.J., Müller, N.L., Rennard, S.I., Vestbo, J., Wouters, E.F.M., Hiorns, M.P., Nakano, Y., Camp, P.G., Fauerbach, P.V.N., Screaton, N.J., Campbell, E.J., Anderson, W.H., Paré, P.D., Levy, R.D., Lake, S.L., Silverman, E.K., Lomas, D.A., Network, I.C.G.: Airway wall thickening and emphysema show independent familial aggregation in chronic obstructive pulmonary disease. Am. J. Respir. Crit. Care Med. 178(5), 500-505 (2008)
14. Pedersen, J.H., Ashraf, H., Dirksen, A., Bach, K., Hansen, H., Toennesen, P., Thorsen, H., Brodersen, J., Skov, B.G.: The Danish randomized lung cancer CT screening trial-overall design and results of the prevalence round. J. Thorac. Oncol. 4(5), 608-614 (2009), http://dx.doi.org/10.1097/JTO. 0b013e3181a0d98f
15. Pekalska, E., Duin, R.P.W.: The Dissimilarity Representation for Pattern Recognition: Foundations And Applications (Machine Perception and Artificial Intelligence). World Scientific Publishing Co., Inc., Singapore (2005)
16. Petersen, J., Nielsen, M., Lo, P., Saghir, Z., Dirksen, A., de Bruijne, M.: Optimal graph based segmentation using flow lines with application to airway wall segmentation. In: Székely, G., Hahn, H. (eds.) IPMI 2011. LNCS, vol. 6801, pp. 49-60. Springer, Heidelberg (2011)
17. Rabe, K.F., Hurd, S., Anzueto, A., Barnes, P.J., Buist, S.A., Calverley, P., Fukuchi, Y., Jenkins, C., Rodriguez-Roisin, R., van Weel, C., Zielinski, J.: Global strategy for the diagnosis, management, and prevention of chronic obstructive pulmonary disease: GOLD executive summary. Am. J. Respir. Crit. Care Med. 176(6), 532-555 (2007)
18. Roher, A.E., Esh, C., Kokjohn, T.A., Kalback, W., Luehrs, D.C., Seward, J.D., Sue, L.I., Beach, T.G.: Circle of willis atherosclerosis is a risk factor for sporadic alzheimer's disease. Arterioscler Thromb Vasc. Biol. 23(11), 2055-2062 (2003), http://dx.doi.org/10.1161/01.ATV.0000095973.42032.44
19. Sørensen, L., de Bruijne, M.: Dissimilarity representations in lung parenchyma classification. In: Karssemeijer, N., Giger, M. (eds.) Medical Imaging: Computer-Aided Diagnosis. Proceedings of SPIE, vol. 7260 (2009)
20. Sørensen, L., Loog, M., Lo, P., Ashraf, H., Dirksen, A., Duin, R.P.W., de Bruijne, M.: Image dissimilarity-based quantification of lung disease from CT. In: Jiang, T., Navab, N., Pluim, J.P.W., Viergever, M.A. (eds.) MICCAI 2010. LNCS, vol. 6361, pp. 37-44. Springer, Heidelberg (2010)
21. Washko, G.R., Dransfield, M.T., Estépar, R.S.J., Diaz, A., Matsuoka, S., Yamashiro, T., Hatabu, H., Silverman, E.K., Bailey, W.C., Reilly, J.J.: Airway wall attenuation: a biomarker of airway disease in subjects with COPD. J. Appl. Physiol. 107(1), 185-191 (2009), http://dx.doi.org/10.1152/ japplphysiol.00216.2009
22. Wolsey, L.A.: Integer Programming. Wiley Interscience, Hoboken (1998)