Analysis of interaction partners for eukaryotic translation elongation factor 1A M-domain by functional proteomics

Biochimie

Volumn 93, Issue 10, 2011, Pages 1738-1746

  Lamberti, Annalisa ^a   Sanges, Carmen ^a   Chambery, Angela ^b   Migliaccio, Nunzia ^a   Rosso, Francesco ^b   Di Maro, Antimo ^b   Papale, Ferdinando ^b   Marra, Monica ^b   Parente, Augusto ^b   Caraglia, Michele ^b   Abbruzzese, Alberto ^b   Arcari, Paolo ^a,c  

^a UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^b SECOND UNIVERSITY OF NAPLES   (Italy)

^c CEINGE BIOTECNOLOGIE AVANZATE   (Italy)

Author keywords

ARGBP2; Interactome; Mass spectrometry; Sorbin; Translation elongation factor 1A

Indexed keywords

ADAPTOR PROTEIN; ELONGATION FACTOR 1; EUKARYOTIC TRANSLATION ELONGATION FACTOR 1A; GLUTATHIONE TRANSFERASE; HYBRID PROTEIN; RECOMBINANT PROTEIN; SORBS2 PROTEIN; UNCLASSIFIED DRUG;

AFFINITY CHROMATOGRAPHY; AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ANIMAL TISSUE; ARTICLE; CANCER CELL CULTURE; CARBOXY TERMINAL SEQUENCE; CELL LYSATE; CELL MEMBRANE; CONFOCAL MICROSCOPY; CONTROLLED STUDY; EMBRYO; FLUORESCENCE RESONANCE ENERGY TRANSFER; FUNCTIONAL PROTEOMICS; HUMAN; HUMAN CELL; INTRACELLULAR SIGNALING; MOUSE; NONHUMAN; PEPTIDE ANALYSIS; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN DOMAIN; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION; WESTERN BLOTTING;

ANIMALS; BLOTTING, WESTERN; CELL LINE, TUMOR; CHROMATOGRAPHY, AFFINITY; EUKARYOTIC INITIATION FACTOR-1; FLUORESCENCE RESONANCE ENERGY TRANSFER; HOMEODOMAIN PROTEINS; HUMANS; IMMUNOPRECIPITATION; MICE; MICROSCOPY, CONFOCAL; MODELS, BIOLOGICAL; PROTEIN BINDING; PROTEOMICS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EUKARYOTA;

EID: 80052094527     PISSN: 03009084     EISSN: 61831638     Source Type: Journal    
DOI: 10.1016/j.biochi.2011.06.006     Document Type: Article

References (54)

1. M. Kjeldgaard, P. Nissen, S. Thirup, and J. Nyborg The crystal structure of elongation factor EF-Tu from Thermus aquaticus in the GTP conformation Curr. Biol. 1 1993 35 50
2. H. Berchtold, L. Reshetnikova, C.O.A. Reiser, N.K. Schirmer, M. Sprinzl, and R. Hilgenfield Crystal structure of active elongation factor Tu reveals major domain rearrangements Nature 365 1993 126 132 (Pubitemid 23282057)
3. G.R. Andersen, L. Valente, L. Pedersen, T.G. Kinzy, and J. Nyborg Crystal structures of nucleotide exchange intermediates in the eEF1A-eEF1B complex Nat. Struct. Biol. 8 2001 531 534 (Pubitemid 32525013)
4. T.E. Dever, M.J. Glynias, and W.C. Merrick GTP-binding domain: three consensus sequence elements with distinct spacing Proc. Natl. Acad. Sci. USA 84 1987 1814 1818 (Pubitemid 17054103)
5. B.S. Negrutskii, and A.V. El'skaya Eukaryotic translation elongation factor 1 alpha: structure, expression, functions, and possible role in aminoacyl-tRNA channelling Prog. Nucleic Acid Res. Mol. Biol. 60 1998 47 78
6. G.R. Andersen, L. Pedersen, L. Valente, I. Chatterjee, T.G. Kinzy, M. Kjeldgaard, and J. Nyborg Structural basis for nucleotide exchange and competition with tRNA in the yeast elongation factor complex eEF1A:eEF1Balpha Mol. Cell. 6 2000 1261 1266
7. Y. Kaziro, H. Itoh, T. Kozasa, M. Nakafuku, and T. Satoh Structure and function of signal-transducing GTP-binding proteins Annu. Rev. Biochem. 60 1991 349 400
8. S.I.S. Rattan, J. Cavallius, and B.C.F. Clark Heat shock-related decline in activity and amounts of active elongation factor 1 alpha in ageing and immortal human cells Biochim. Biophys. Res. Commun. 152 1988 169 176
9. J.W.B. Hershey Translational control in mammalia cells Annu. Rev. Biochem. 60 1991 717 755
10. G. Thomas, and G.J. Thomas Translational control of mRNA expression during the early mitogenic response in Swiss mouse 3T3 cells: identification of specific proteins Cell. Biol. 103 1986 2137 2144 (Pubitemid 17216641)
11. J. Cavallius, S.I.S. Rattan, and B.C.F. Clark Changes in activity and amount of active elongation factor 1 in aging and immortal human fibroblast cultures Exp. Gerontol. 21 1986 149 157 (Pubitemid 17211323)
12. A. Ayala, J. Parrado, M. Bougria, and A. Machado Effects of oxidative stress, produced by cumene hydroperoxide, on the various steps of protein synthesis J. Biol. Chem. 271 1996 23105 23110 (Pubitemid 26314744)
13. J. Sanders, A. Maassen, and W. Möller Elongation factor-1 messenger-RNA levels in cultured cells are high compared to tissue and are not drastically affected further by oncogenic transformation Nucleic Acids Res. 20 1992 5907 5910
14. K. Chi, D.V. Jones, and M.L. Frazier Expression of an elongation factor 1 gamma-related sequence in adenocarcinomas of the colon Gasteroenterology 103 1992 98 102
15. Y. Lew, D.V. Jones, W.M. Mars, D. Evans, D. Byrd, and M.L. Frazier Expression of elongation factor-1-related sequence in human pancreatic cancer Pancreas 7 1992 144 152
16. M. Tatsuka, H. Mitsui, M. Wada, A. Nagata, H. Nojima, and H. Okayama Elongation factor-1 alpha gene determines susceptibility to transformation Nature 359 1992 333 336
17. J.C.W. Shepherd, U. Walldorf, P. Hug, and W.J. Gehring Fruit flies with additional expression of the elongation factor EF1a live longer Proc. Nat. Acad. Sci. U S A 86 1989 7520 7521 (Pubitemid 19254487)
18. S.D. Pencil, Y. Toh, and G.L. Nicolson Candidate metastasis associated genes of the rat 13762NF mammary adenocarcinoma Breast Cancer Res. Treat. 25 1993 165 174 (Pubitemid 23170615)
19. S. Taniguchi, S. Miyamoto, H. Sadano, and H. Kobayashi Rat elongation factor 1 alpha: sequence of cDNA from highly metastatic fos-transferred cell line Nucleic Acids Res. 19 1991 6949
20. B.T. Edmonds, J. Murray, and J. Condeelis pH regulation of the factin binding properties of dictyostelium elongation factor-1a J. Biol. Chem. 270 1995 15222 15230
21. W. Yang, W. Burkhart, J. Cavallius, W.C. Merrick, and W.F. Boss Purification and characterization of a phosphatidylinositol-4-kinase activator in carrot cells J. Biol. Chem. 268 1993 393 398
22. D.A. Collings, G.O. Wasteneys, M. Miyazaki, and R.E. Williamson Elongation factor 1a is a component of the subcortical actin bundles of characean algae Cell. Biol. Int. 18 1994 1019 1024
23. Y. Kurasawa, K. Hanyu, Y. Watanabe, and O. Numata F-actin bundling activity of Tetrahymena elongation factor 1a is regulated by Ca2+/calmodulin J. Biochem. 119 1996 791 798
24. M. Bektas, R. Nurten, Z. Gürel, Z. Sayers, and E. Bermek Interactions of eukaryotic elongation factor 2 with actin: a possible link between protein synthetic machinery and cytoskeleton FEBS Lett. 356 1994 89 93 (Pubitemid 24374039)
25. G. Liu, B.T. Edmonds, and J. Condeelis pH, EF1a and the cytoskeleton Trends Cell. Biol. 6 1996 168 171
26. 2+-actin: some peculiarities Biochim. Biophys. Acta 1426 1999 32 42 (Pubitemid 29027866)
27. K. Okazaki, and S. Yumura Differential association of three actin bundling proteins with microfilaments in dictyostelium amoebae Eur. J. Cell. Biol. 66 1995 75 81
28. G. Liu, J. Tang, B.T. Edmonds, J. Murray, S. Levin, and J. Condeelis F-actin sequesters elongation factor 1alpha from interaction with aminoacyl-tRNA in a pH-dependent reaction J. Cell. Biol. 135 1996 953 963 (Pubitemid 26403771)
29. A. Lamberti, C. Sanges, O. Longo, A. Chambery, A. Di Maro, A. Parente, M. Masullo, and P. Arcari Analysis of nickel-binding peptides in a human hepidermoid cancer cell line by Ni-NTA affinity chromatography and mass spectrometry Protein Pept. Lett. 15 2008 1126 1131
30. J. Vandekerckhove, and K. Weber Actin typing on total cellular extracts. A highly sensitive protein-chemical procedure able to distinguish different actins Nature 284 1980 475
31. S.R. Gross, and T.G. Kinzy Translation elongation factor 1A is essential for regulation of the actin cytoskeleton and cell morphology Nat. Struct. Mol. Biol. 12 2005 772 778 (Pubitemid 43086251)
32. B. Riis, S.I.S. Rattan, B.F.C. Clark, and W.C. Merrick Eukaryotic protein elongation factors TIBS 15 1990 420 424
33. F. Mansilla, C.A.G. Dominguez, J.E. Yeadon, T.J. Corydon, S.J. Burden, and C.R. Knudsen Translation elongation factor eEF1A binds to a novel myosin binding protein-C-like protein J. Cell. Biochem. 105 2008 847 858
34. G. Panasyuk, I. Nemazanyy, V. Filonenko, B. Negrutskii, and A.V. El'skaya A2 isoform of mammalian translation factor eEF1A displays increased tyrosine phosphorylation and ability to interact with different signalling molecules Int. J. Biochem. Cell. Biol. 40 2008 63 71 (Pubitemid 350052666)
35. S.I. Ejiri Moonlighiting function of polypeptide elongation factor 1: from actin bundling to zinc finger protein R1-associeted nuclear localization Biosci. Biotechnol. Biochem. 66 2002 1 21
36. C.J. Jeffery Moonlighting proteins Trends Biotechnol. Sci. 24 1999 8 11 (Pubitemid 29074455)
37. W.C. Merrick Mechanism and regulation of eukaryotic protein synthesis Microbiol. Rev. 56 1992 291 315
38. G. Caratù, D. Allegra, M. Bimonte, G.G. Schiattarella, C. D'Ambrosio, A. Scaloni, M. Napolitano, T. Russo, and N. Zambrano Identification of the ligands of protein interaction domains through a functional approach Mol. Cell. Proteomics 6 2007 333 345 (Pubitemid 46359520)
39. T. Uetsuki, A. Naito, S. Nagata, and Y. Kaziro Isolation and characterization of the human chromosomal gene for polypeptide chain elongation factor-1 alpha J. Biol. Chem. 264 1989 5791 5798 (Pubitemid 19098044)
40. M. Hachet-Haas, N. Converset, O. Marchal, H. Matthes, S. Gioria, J.L. Galzi, and S. Lecat FRET and colocalization analyzer-a method to validate measurements of sensitized emission FRET acquired by confocal microscopy and available as an ImageJ plug-in Microsc. Res. Tech. 69 2006 941 956 (Pubitemid 44888237)
41. A. Lamberti, M. Caraglia, O. Longo, M. Marra, A. Abbruzzese, and P. Arcari The translation elongation factor 1A in tumorigenesis, signal transduction and apoptosis: review article Amino Acids 26 2004 443 448 (Pubitemid 39093149)
42. H.T. Li, Y.P. Su, T.M. Cheng, J.M. Xu, J. Liao, J.C. Chen, C.Y. Ji, G.P. Ai, and J.P. Wang The interaction between interferon-induced protein with tetratricopeptide repeats-1 and eukaryotic elongation factor-1A Mol. Cell. Biochem. 337 2010 101 110
43. R.M. Clegg X.F. Wang, B. Herman, Fluorescence Imaging Spectroscopy and Microscopy 1996 Wiley New York 179 252
44. P. Konig, G. Krasteva, C. Tag, I.R. Konig, C. Arens, and W. Kummer FRET-CLSM and double-labeling indirect immunofluorescence to detect close association of proteins in tissue sections Lab. Invest. 86 2006 853 864 (Pubitemid 44100483)
45. M. Vagne-Descroix, D. Pansu, H. Jörnvall, M. Carlquist, H. Guignard, G. Jourdan, A. Desvigne, M. Collinet, C. Caillet, and V. Mutt Isolation and characterisation of porcine sorbin Eur. J. Biochem. 201 1991 53 59
46. F. Abou, E.l. Fadil-Nicol, F. Berger, M. Descroix-Vagne, and D. Pansu Presence of sorbin in human digestive tract and endocrine digestive tumours Gut 46 2000 182 190 (Pubitemid 30305843)
47. K. Whahbi, J.P. Magaud, D. Pansu, and M. Descroix-Vagne Coding region of the sorbin gene in different species Peptides 22 2001 2045 2053
48. D. Hand, and L.E. Eiden Human sorbin is generated via splicing of an alternative transcript from the ArgBP2 gene locus Peptides 26 2005 1278 1282 (Pubitemid 40798086)
49. G. Charpin, A.R. Chikh-Isaa, H. Guignard, G. Jourdan, C. Dumas, D. Pansu, and V. Descroix Effect of sorbin on duodenal absorption of water and electrolyte in the rat Gastroenterology 103 1992 1568 1573
50. N. Kioka, K. Ueda, and T. Amachi Vinexin, CAP/ponsin, ArgBP2: a novel adaptor protein family regulating cytoskeletal organization and signal transduction Cell Struct. Funct. 27 2002 1 7 (Pubitemid 34498349)
51. A. Kimura, C.A. Baumann, S. Chiang, and A.R. Saltiel The sorbin homology domain: a motif for the targeting of proteins to lipid rafts Proc. Natl. Acad. Sci. U S A 98 2001 9098 9113
52. J.M. Lee The role of protein elongation factor eEF1A2 in ovarian cancer Reprod. Biol. Endocrinol. 1 2003 69
53. A. Amiri, F. Noei, S. Jeganathan, G. Kulkarni, D.E. Pinke, and J.M. Lee eEF1A2 activates Akt and stimulates Akt dependent actin remodeling, invasion and migration Oncogene 26 2007 3027 3040 (Pubitemid 46733638)
54. A. Lamberti, O. Longo, M. Marra, P. Tagliaferri, E. Bismuto, A. Fiengo, C. Viscomi, A. Budillon, U.R. Rapp, E. Wang, S. Venuta, A. Abbruzzese, P. Arcari, and M. Caraglia C-Raf antagonizes apoptosis induced by IFN-alpha in human lung cancer cells by phosphorylation and increase of the intracellular content of elongation factor 1A Cell Death Differ. 14 2007 952 962 (Pubitemid 46629834)