Profiling of cucumber mosaic virus responsive mRNAs in tomato using μ paraflo microfluidics microarrays

Journal of Nanoscience and Nanotechnology

Volumn 11, Issue 4, 2011, Pages 3115-3125

  Lang, QiuLei ^a,b   Jin, ChunZhi ^b   Gao, Xiaolian ^c   Feng, JunLi ^b   Chen, ShaoNing ^b   Lai, LeiYu ^b   Chen, JiShuang ^a,b  

^a ZHEJIANG UNIVERSITY   (China)

^b ZHEJIANG SCI TECH UNIVERSITY   (China)

^c LC Sciences   (United States)

Author keywords

Cucumber Mosaic Virus; Disease Development; Gene Regulation; Microarray; Tomato

Indexed keywords

CUCUMBER MOSAIC VIRUS; DEFENSE RELATED GENES; DISEASE DEVELOPMENT; FUNCTIONAL CLASSIFICATION; MOLECULAR MECHANISM; SOLANUM LYCOPERSICUM; SUSCEPTIBILITY RESPONSE; TOMATO;

GENE EXPRESSION; MICROARRAYS; PLANTS (BOTANY); SEED; VIRUSES;

FRUITS;

MESSENGER RNA; VEGETABLE PROTEIN;

ARTICLE; ELECTRONICS; EQUIPMENT; EQUIPMENT DESIGN; GENE EXPRESSION PROFILING; GENETICS; INSTRUMENTATION; METABOLISM; MICROFLUIDIC ANALYSIS; MOSAIC VIRUS; PHYSIOLOGY; PROTEIN MICROARRAY; TOMATO; VIROLOGY;

CUCUMOVIRUS; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; GENE EXPRESSION PROFILING; LYCOPERSICON ESCULENTUM; MICROFLUIDIC ANALYTICAL TECHNIQUES; MINIATURIZATION; PLANT PROTEINS; PROTEIN ARRAY ANALYSIS; RNA, MESSENGER;

EID: 80051934894     PISSN: 15334880     EISSN: 15334899     Source Type: Journal    
DOI: 10.1166/jnn.2011.3860     Document Type: Article

References (55)

1. P. R. J. Birch and S. Kamoun, New Technologies for Life Sciences, a Trends Guide December, 77 (2000).
2. N. Benhamou, Trends Plant Sci. 1, 233 (1996).
3. A. Gibly, A. Bonshtien, V. Balaji, P. Debbie, G. B. Martin, and G. Sessa, Mol. Plant Microbe Interact. 17, 1212 (2004).
4. V. Balaji, M. Mayrose, O. Sherf, J. Jacob-Hirsch, R. Eichenlaub, N. Iraki, S. Manulis-Sasson, G. Rechavi, I. Barash, and G. Sessa, Plant Physiol. 146, 1797 (2008).
5. V. Balaji, A. Gibly, P. Debbie, and G. Sessa, Funct. Integr. Genomics 7, 305 (2007).
6. Y. Zhao, R. Thilmony, C. L. Bender, A. Schaller, S. Y. He, and G. A. Howe, Plant J. 36, 485 (2003).
7. P. Palukaitis and F. Garcia-Arenal, Adv. Virus Res. 62, 241 (2003).
8. C. Jordá, A. Alfaro, A. Aranda, E. Moriones, and F. Garcia, Plant Dis. 76, 363 (1992).
9. P. B. N. Maria, Y. Kenichi, N. Sanae, M. Masaya, N. Yasuhiro, and M. Hideaki, Adv. Sci. Lett. 3, 273 (2010).
10. R. Asmatulu, B. Zhang, and N. Nuraje, J. Nanosci. Nanotechnol. 10, 6383 (2010).
11. U. Masato, N. Hiroyuki, and M. Hideaki, J. Nanosci. Nanotechnol. 9, 577 (2009).
12. T. R. Lee, Y. S. Chang, J. B. Choi, W. K. Liu, and Y. J. Kim, J. Nanosci. Nanotechnol. 9, 7407 (2009).
13. J. Yan, D. Pan, C. Zhu, L. Wang, S. Song, and C. Fan, J. Nanosci. Nanotechnol. 9, 1194 (2009).
14. S. S. Hwa, J. K. Hyung, J. S. Sang, and L. J. Noo, J. Nanosci. Nanotechnol. 9, 7330 (2009).
15. L. Cheng, Q. Ge, B. Sun, P. Yu, X. Ke, and Z. Lu, J. Biomed. Nanotechnol. 5, 542 (2009).
16. L. Tian, S. Li, H. Liu, Z. Wang, and N. He, J. Biomed. Nanotechnol. 5, 511 (2009).
17. S. Li, H. Liu, and N. He, J. Nanosci. Nanotechnol. 10, 4875 (2010).
18. H. Liu, S. Li, L. Tian, L. Liu, and N. He, J. Nanosci. Nanotechnol. 10, 5311 (2010).
19. S. Li, H. Liu, and N. He, J. Nanosci. Nanotechnol. 10, 4875 (2010).
20. H. Liu, S. Li, L. Liu, L. Tian, and N. He, Anal. Biochem. 386, 126 (2009).
21. H. Liu, S. Li, M. Ji, L. Nie, J. Chen, Y. Miao, and N. He, J. Nanosci. Nanotechnol. 8, 405 (2008).
22. H. Liu, S. Li, Z. Wang, Z. Li, Y. Deng, H. Wang, Z. Shi, and N. He, Appl. Surf. Sci. 255, 600 (2008).
23. S. Li, M. Ji, N. He, and Z. Lu, J. Nanosci. Nanotechnol. 7, 3245 (2007).
24. H. Liu, S. Li, Z. Wang, M. Ji, L. Nie, and N. He, J. Biotechnol. 131, 217 (2007).
25. S. Li, H. Liu, Z. Wang, P. Hou, Y. Guo, Q. He, and N. He, Anal. Biochem. 359, 277 (2006).
26. S. Moore, P. Payton, and J. Giovannoni, Comp. Funct. Genomics. 3, 164 (2002).
27. M. R. Kant, K. Ament, M. W. Sabelis, M. A. Haring, and R. C. Schuurink, Plant Physiol. 135, 483 (2004).
28. X. Gao, E. Gulari, and X. Zhou, Biopolymers 73, 579 (2004).
29. B. M. Bolstad, R. A. Irizarry, M. Astrand, and T. P. Speed, Bioinformatics 19, 185 (2003).
30. J. Vandesompele, K. De Preter, F. Pattyn, B. Poppe, N. Van Roy, A. De Paepe, and F. Speleman, Genome Biol. 3, research 0034.1 (2002).
31. K. Maleck, A. Levine, T. Eulgem, A. Morgan, J. Schmid, K. A. Lawton, J. L. Dangl, and R. A. Dietrich, Nat. Genet. 26, 403 (2000).
32. P. M. Schenk, K. Kazan, I. Wilson, J. P. Anderson, T. Richmond, S. C. Somerville, and J. M. Manners, Proc. Natl. Acad. Sci. 97, 11655 (2000).
33. S. Golem and J. N. Culver, Mol. Plant Microbe Interact 16, 681 (2003).
34. S. A. Whitham, S. Quan, H. S. Chang, B. Cooper, B. Estes, T. Zhu, X. Wang, and Y. M. Hou, Plant J. 33, 271 (2003).
35. R. Marathe, Z. Guan, R. Anandalakshmi, H. Zhao, and S. P. Dinesh-Kumar, Plant Mol. Biol. 55, 501 (2004).
36. R. Van der Hoeven, C. Ronning, J. Giovannoni, G. Martin, and S. Tanksley, Plant Cell 14, 1441 (2002).
37. F. Ross, Virology 14, 340 (1961).
38. M. E. Alvarez, Plant Mol. Biol. 44, 429 (2000).
39. M. C. Verberne, R. Verpoorte, J. F. Bol, J. Mercado-Blanco, and H. J. Linthorst, Nat. Biotechnol 18, 779 (2000).
40. J. Catinot, A. Buchala, E. Abou-Mansour, and J. P. Metraux, FEBS Lett. 582, 473 (2008).
41. B. P. Thomma, K. Eggermont, I. A. Penninckx, B. Mauch-Mani, R. Vogelsang, B. P. Cammue, and W. F. Broekaert, Proc. Natl. Acad. Sci. 95, 15107 (1998).
42. M. A. Aranda, M. Escaler, C. L. Thomas, and A. J. Maule, Plant J. 20, 153 (1999).
43. M. Escaler, M. A. Aranda, C. L. Thomas, and A. J. Maule, Virology 267, 318 (2000).
44. J. B. Glotzer, M. Saltik, S. Chiocca, A. I. Michou, P. Moseley, and M. Cotten, Nature 407, 207 (2000).
45. Z. Havelda and A. J. Maule, Plant Cell 12, 1975 (2000).
46. G. B. Martin, A. J. Bogdanove, and G. Sessa, Annu. Rev. Plant Biol. 54, 23 (2003).
47. S. Zhang and D. F. Klessig, Trends Plant Sci. 6, 520 (2001).
48. T. Asai, G. Tena, J. Plotnikova, M. R. Willmann, W. L. Chiu, L. Gomez-Gomez, T. Boller, F. M. Ausubel, and J. Sheen, Nature 415, 977 (2002).
49. F. Bent, Proc. Natl. Acad. Sci. 98, 784 (2001).
50. F. Cardinale, I. Meskiene, F. Ouaked, and H. Hirt, Plant Cell 14, 703 (2002).
51. C. A. Frye, D. Tang, and R. W. Innes, Proc. Natl. Acad. Sci. 98, 373 (2001).
52. R. Desikan, S. A-H-Mackerness, J. T. Hancock, and S. J. Neill, Plant Physiol. 127, 159 (2001).
53. M. A. Torres, J. L. Dangl, and J. D. Jones, Proc. Natl. Acad. Sci. 99, 517 (2002).
54. P. N. Maruša, G. Kristina, B. Špela, K. S. Hana, K. Maja, J. Maarten, and R. Maja, Physiol. Mol. Plant Pathol. 67, 237 (2006).
55. M. Wissenbach, B. Uberlacker, F. Vogt, D. Becker, F. Salamini, and W. Rohde, Plant J. 4, 411 (1993).