Altered substrate specificity of the gluco-oligosaccharide oxidase from Acremonium strictum

Biotechnology and Bioengineering

Volumn 108, Issue 10, 2011, Pages 2261-2269

  Foumani, Maryam ^a   Vuong, Thu V ^a   Master, Emma R ^a  

^a UNIVERSITY OF TORONTO   (Canada)

Author keywords

Acremonium strictum; Carbohydrate docking; Gluco oligosaccharide oxidase; Protein engineering; Substrate specificity

Indexed keywords

ACREMONIUM STRICTUM; AMINO ACID SUBSTITUTION; CATALYTIC EFFICIENCIES; CELLO-OLIGOSACCHARIDES; GLUCO-OLIGOSACCHARIDE OXIDASE; MUTANT ENZYMES; N-ACETYLGLUCOSAMINE; OXIDATIVE MODIFICATION; PICHIA PASTORIS; PROTEIN ENGINEERING; RECOMBINANT PROTEIN; SEQUENCE IDENTITY; SUBSTRATE SPECIFICITY; XYLOBIOSES; XYLOOLIGOSACCHARIDES;

AMINO ACIDS; CARBOHYDRATES; CATALYSTS; CLONING; ENZYMES; GLUCOSE; OLIGOSACCHARIDES;

SUBSTRATES;

AMINO ACID; CELLOBIOSE; GALACTOSE; GLUCO OLIGOSACCHARIDE OXIDASE; GLUCOSE; MALTOSE; MANNOSE; MONOSACCHARIDE; N ACETYLGLUCOSAMINE; OLIGOSACCHARIDE; OXIDOREDUCTASE; UNCLASSIFIED DRUG; XYLOBIOSE; XYLOSE; XYLOTRIOSE; ALCOHOL DEHYDROGENASE; FUNGAL PROTEIN; GLUCOOLIGOSACCHARIDE OXIDASE;

ACREMONIUM; ACREMONIUM STRICTUM; AMINO ACID SUBSTITUTION; ARTICLE; ENZYME SPECIFICITY; FUNGAL STRAIN; NONHUMAN; OXIDATION; PICHIA PASTORIS; CHEMISTRY; ENZYMOLOGY; GENE EXPRESSION; GENETICS; METABOLISM; MISSENSE MUTATION; MOLECULAR CLONING; PICHIA;

ACREMONIUM STRICTUM; PICHIA PASTORIS;

ACREMONIUM; ALCOHOL OXIDOREDUCTASES; AMINO ACID SUBSTITUTION; CLONING, MOLECULAR; FUNGAL PROTEINS; GENE EXPRESSION; MUTATION, MISSENSE; OLIGOSACCHARIDES; PICHIA; SUBSTRATE SPECIFICITY;

EID: 80051784157     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.23149     Document Type: Article

References (26)

1. Arnold K, Bordoli L, Kopp J, Schwede T. 2006. The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling. Bioinformatics 22(2): 195-201.
2. Blanchard V, Gadkari R, Gerwig G, Leeflang B, Dighe R, Kamerling J. 2007. Characterization of the N-linked oligosaccharides from human chorionic gonadotropin expressed in the methylotrophic yeast Pichia pastoris Glycoconj J 24(1): 33-47.
3. Boraston AB, Sandercock LE, Warren RAJ, Kilburn DG. 2003. O-glycosylation of a recombinant carbohydrate-binding module mutant secreted by Pichia pastoris J Mol Microbiol Biotechnol 5(1): 29-36.
4. Cereghino JL, Cregg JM. 2000. Heterologous protein expression in the methylotrophic yeast Pichia pastoris FEMS Microbiol Rev 24(1): 45-66.
5. Ciriminna R, Pagliaro M. 2010. Industrial oxidations with organocatalyst TEMPO and its derivatives. Org Process Res Dev 14(1): 245-251.
6. Fan Z, Oguntimein GB, Reilly PJ. 2000. Characterization of kinetics and thermostability of Acremonium strictum glucooligosaccharide oxidase. Biotechnol Bioeng 68(2): 231-237.
7. Firbank SJ, Rogers MS, Wilmot CM, Dooley DM, Halcrow MA, Knowles PF, McPherson MJ, Phillips SE. 2001. Crystal structure of the precursor of galactose oxidase: An unusual self-processing enzyme. Proc Natl Acad Sci USA 98(23): 12932-12937.
8. Hallberg BM, Henriksson G, Pettersson G, Vasella A, Divne C. 2003. Mechanism of the reductive half-reaction in cellobiose dehydrogenase. J Biol Chem 278(9): 7160-7166.
9. Hallberg BM, Leitner C, Haltrich D, Divne C. 2004. Crystal structure of the 270kDa homotetrameric lignin-degrading enzyme pyranose 2-oxidase. J Mol Biol 341(3): 781-796.
10. Heuts DPHM, Janssen DB, Fraaije MW. 2007. Changing the substrate specificity of a chitooligosaccharide oxidase from Fusarium graminearum by model-inspired site-directed mutagenesis. FEBS Lett 581(25): 4905-4909.
11. Hirose M, Kameyama S, Ohi H. 2002. Characterization of N-linked oligosaccharides attached to recombinant human antithrombin expressed in the yeast Pichia pastoris Yeast 19(14): 1191-1202.
12. Huang CH, Lai WL, Lee MH, Chen CJ, Vasella A, Tsai YC, Liaw SH. 2005. Crystal structure of glucooligosaccharide oxidase from Acremonium strictum: A novel flavinylation of 6-S-cysteinyl, 8alpha-N1-histidyl FAD. J Biol Chem 280(46): 38831-38838.
13. Huang CH, Winkler A, Chen CL, Lai WL, Tsai YC, Macheroux P, Liaw SH. 2008. Functional roles of the 6-S-cysteinyl, 8alpha-N1-histidyl FAD in glucooligosaccharide oxidase from Acremonium strictum J Biol Chem 283(45): 30990-30996.
14. Isogai T, Yanagisawa M, Isogai A. 2009. Degrees of polymerization (DP) and DP distribution of cellouronic acids prepared from alkali-treated celluloses and ball-milled native celluloses by TEMPO-mediated oxidation. Cellulose 16(1): 117-127.
15. Kiryu T, Nakano H, Kiso T, Murakami H. 2008. Purification and characterization of a carbohydrate: Acceptor oxidoreductase from Paraconiothyrium sp. that produces lactobionic acid efficiently. Biosci Biotechnol Biochem 72(3): 833-841.
16. Lee MH, Lai WL, Lin SF, Hsu CS, Liaw SH, Tsai YC. 2005. Structural characterization of glucooligosaccharide oxidase from Acremonium strictum Appl Environ Microbiol 71(12): 8881-8887.
17. Letourneur O, Gervasi G, Gaïa S, Pagès J, Watelet B, Jolivet M. 2001. Characterization of Toxoplasma gondii surface antigen 1 (SAG1) secreted from Pichia pastoris: Evidence of hyper O-glycosylation. Biotechnol Appl Biochem 33(Pt 1): 35-45.
18. Lin S-F, Yang T-Y, Inukai T, Yamasaki M, Tsai Y-C. 1991. Purification and characterization of a novel glucooligosaccharide oxidase from Acremonium strictum T1. Biochim Biophys Acta Protein Struct Mol Enzymol 1118(1): 41-47.
19. Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE, Belew RK, Olson AJ. 1998. Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J Comp Chem 19(14): 1639-1662.
20. Parikka K, Tenkanen M. 2009. Oxidation of methyl alpha-D-galactopyranoside by galactose oxidase: Products formed and optimization of reaction conditions for production of aldehyde. Carbohydr Res 344(1): 14-20.
21. Parikka K, Leppanen AS, Pitkanen L, Reunanen M, Willfor S, Tenkanen M. 2010. Oxidation of polysaccharides by galactose oxidase. J Agric Food Chem 58(1): 262-271.
22. Saito T, Hirota M, Tamura N, Isogai A. 2010. Oxidation of bleached wood pulp by TEMPO/NaClO/NaClO2 system: Effect of the oxidation conditions on carboxylate content and degree of polymerization. J Wood Sci 56(3): 227-232.
23. van Hellemond EW, Leferink NG, Heuts DP, Fraaije MW, van Berkel WJ. 2006. Occurrence and biocatalytic potential of carbohydrate oxidases. Adv Appl Microbiol 60: 17-54.
24. Whittaker JW. 2005. The radical chemistry of galactose oxidase. Arch Biochem Biophys 433(1): 227-239.
25. Wohlfahrt G, Witt S, Hendle J, Schomburg D, Kalisz HM, Hecht HJ. 1999. 1.8 and 1.9Å resolution structures of the Penicillium amagasakiense and Aspergillus niger glucose oxidases as a basis for modelling substrate complexes. Acta Crystallogr D Biol Crystallogr 55(Pt 5): 969-977.
26. Xu F, Golightly EJ, Fuglsang CC, Schneider P, Duke KR, Lam L, Christensen S, Brown KM, Jorgensen CT, Brown SH. 2001. A novel carbohydrate:acceptor oxidoreductase from Microdochium nivale Eur J Biochem 268(4): 1136-1142.