Improved V3 genotyping with duplicate PCR amplification for determining HIV-1 tropism

Journal of Antimicrobial Chemotherapy

Volumn 66, Issue 9, 2011, Pages 1972-1975

  Raymond, Stéphanie ^a,b   Recordon Pinson, Patricia ^c   Saliou, Adrien ^a,b   Delobel, Pierre ^a,b   Nicot, Florence ^a,b   Descamps, Diane ^d   Marcelin, Anne Geneviève ^e   Flandre, Philippe ^e   Calvez, Vincent ^e   Masquelier, Bernard ^c   Izopet, Jacques ^a,b   Recordon Pinson, P ^f   Fleury, H ^f   Masquelier, B ^f   Vabret, A ^f   Pallier, C ^f   Lazrek, M ^f   Andre P ^f   Tardy, J C ^f   Trabaud, M A ^f   Tamalet, C ^f   Montes, B ^f   Segondy, M ^f   Ferre V ^f   Cottalorda, J ^f   Mace M ^f   Descamps, D ^d   Brun Vezinet F ^d   Si Mohammed, A ^g   Charpentier, C ^g   Desbois, D ^h   Dussaix, E ^h   Marcelin, A G ^e   Soulie C ^e   Calvez, V ^e   Flandre, F ^e   Morand Joubert, L ^f   Amiel, C ⁱ   Schneider, V ⁱ   Maillard, A ^f   Ruffault, A ^f   Izopet, J ^f   Nicot, F ^f   Delobel, P ^f   Raymond, S ^f   more..

^a INSERM   (France)

^b TOULOUSE UNIVERSITY HOSPITAL   (France)

^c BORDEAUX UNIVERSITY HOSPITAL   (France)

^d BICHAT HOSPITAL   (France)

^e PITIÉ SALPÊTRIÈRE HOSPITAL   (France)

^f Bichat Claude Bernard ^*

^g HÔPITAL EUROPÉEN GEORGES POMPIDOU   (France)

^h Centre Hépatobiliaire Paul Brousse   (France)

ⁱ Tenon   (France)

Author keywords

Bulk sequencing; CCR5 receptor; HIV 1 tropism; Phenotype; V3 genotype

Indexed keywords

CHEMOKINE RECEPTOR CXCR4;

ALGORITHM; AMPLICON; ARTICLE; GENE AMPLIFICATION; GENE DUPLICATION; GENE SEQUENCE; GENOTYPE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; MAJOR CLINICAL STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; TROPISM; VIRAL GENETICS; VIRUS RECOMBINANT;

EID: 80051694800     PISSN: 03057453     EISSN: 14602091     Source Type: Journal    
DOI: 10.1093/jac/dkr224     Document Type: Article

References (10)

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9. McGovern RA, Thielen A, Mo T et al. Population-based V3 genotypic tropism assay: a retrospective analysis using screening samples from the A4001029 and MOTIVATE studies. AIDS 2010; 24: 2517-25.
10. Swenson LC, Mo T, Dong WW et al. Deep sequencing to infer HIV-1 co-receptor usage: application to three clinical trials of maraviroc in treatment-experienced patients. J Infect Dis 2011; 203: 237-45.