메뉴 건너뛰기




Volumn , Issue 3, 2010, Pages 23-32

MicroRNA (miRNA) expression is regulated by butyrate-induced epigenetic modulation of gene expression in bovine cells

Author keywords

Bovine cells; Butyrate; Epigenetics; Gene expression; miroRNA

Indexed keywords

BOVINAE;

EID: 80051574976     PISSN: None     EISSN: 1179237X     Source Type: Journal    
DOI: 10.4137/geg.s6144     Document Type: Article
Times cited : (14)

References (29)
  • 1
    • 0017767153 scopus 로고
    • n-Butyrate causes histone modification in HeLa and Friend erythroleukaemia cells
    • Aug 4
    • Riggs MG, Whittaker RG, Neumann JR, Ingram VM. n-Butyrate causes histone modification in HeLa and Friend erythroleukaemia cells. Nature. 1977 Aug 4;268(5619):462-4.
    • (1977) Nature , vol.268 , Issue.5619 , pp. 462-464
    • Riggs, M.G.1    Whittaker, R.G.2    Neumann, J.R.3    Ingram, V.M.4
  • 2
    • 12244257803 scopus 로고    scopus 로고
    • Butyrate-induced apoptosis and cell cycle arrest in bovine kidney epithelial cells: involvement of caspase and proteasome pathways
    • Jan
    • Li CJ, Elsasser TH. Butyrate-induced apoptosis and cell cycle arrest in bovine kidney epithelial cells: involvement of caspase and proteasome pathways. J Anim Sci. 2005 Jan;83(1):89-97.
    • (2005) J Anim Sci , vol.83 , Issue.1 , pp. 89-97
    • Li, C.J.1    Elsasser, T.H.2
  • 3
    • 0033926403 scopus 로고    scopus 로고
    • Review: chromatin structural features and targets that regulate transcription
    • Apr
    • Wolffe AP, Guschin D. Review: chromatin structural features and targets that regulate transcription. J Struct Biol. 2000 Apr;129(2-3):102-22.
    • (2000) J Struct Biol , vol.129 , Issue.2-3 , pp. 102-122
    • Wolffe, A.P.1    Guschin, D.2
  • 4
    • 77953475357 scopus 로고    scopus 로고
    • Butyrate induced cell cycle arrest in bovine cells through targeting gene expression relevant to DNA replication apparatus
    • Li CJ, Li RW. Butyrate induced cell cycle arrest in bovine cells through targeting gene expression relevant to DNA replication apparatus. Gene Regul Syst Bio. 2008;2:113-23.
    • (2008) Gene Regul Syst Bio , vol.2 , pp. 113-123
    • Li, C.J.1    Li, R.W.2
  • 5
    • 0033044297 scopus 로고    scopus 로고
    • The proliferative actions of insulin, insulin-like growth factor-I, epidermal growth factor, butyrate and propionate on ruminal epithelial cells in vitro
    • Baldwin RL. The proliferative actions of insulin, insulin-like growth factor-I, epidermal growth factor, butyrate and propionate on ruminal epithelial cells in vitro. Smal Ruminant Research. 1999;32:261-8.
    • (1999) Smal Ruminant Research , vol.32 , pp. 261-268
    • Baldwin, R.L.1
  • 6
    • 33749572256 scopus 로고    scopus 로고
    • Butyrate induces profound changes in gene expression related to multiple signal pathways in bovine kidney epithelial cells
    • Li RW, Li C. Butyrate induces profound changes in gene expression related to multiple signal pathways in bovine kidney epithelial cells. BMC Genomics. 2006;7:234.
    • (2006) BMC Genomics , vol.7 , pp. 234
    • Li, R.W.1    Li, C.2
  • 7
    • 33846222019 scopus 로고    scopus 로고
    • Differential regulation of the tyrosine hydroxylase and enkephalin neuropeptide transmitter genes in rat PC12 cells by short chain fatty acids: concentration-dependent effects on transcription and RNA stability
    • Feb 9
    • Parab S, Nankova BB, La Gamma EF. Differential regulation of the tyrosine hydroxylase and enkephalin neuropeptide transmitter genes in rat PC12 cells by short chain fatty acids: concentration-dependent effects on transcription and RNA stability. Brain Res. 2007 Feb 9;1132(1):42-50.
    • (2007) Brain Res , vol.1132 , Issue.1 , pp. 42-50
    • Parab, S.1    Nankova, B.B.2    La Gamma, E.F.3
  • 8
    • 33744990610 scopus 로고    scopus 로고
    • Dietary agents as histone deacetylase inhibitors
    • Jun
    • Myzak MC, Ho E, Dashwood RH. Dietary agents as histone deacetylase inhibitors. Mol Carcinog. 2006 Jun;45(6):443-6.
    • (2006) Mol Carcinog , vol.45 , Issue.6 , pp. 443-446
    • Myzak, M.C.1    Ho, E.2    Dashwood, R.H.3
  • 9
    • 0035933575 scopus 로고    scopus 로고
    • Genes modulated by histone acetylation as new effectors of butyrate activity
    • Jun 22
    • Della Ragione F, Criniti V, Della Pietra V, et al. Genes modulated by histone acetylation as new effectors of butyrate activity. FEBS Lett. 2001 Jun 22; 499(3):199-204.
    • (2001) FEBS Lett , vol.499 , Issue.3 , pp. 199-204
    • Della Ragione, F.1    Criniti, V.2    Della Pietra, V.3
  • 10
    • 33344464934 scopus 로고    scopus 로고
    • Insulin resistance is an intrinsic defect independent of fat mass in women with Turner's syndrome
    • Salgin B, Amin R, Yuen K, Williams RM, Murgatroyd P, Dunger DB. Insulin resistance is an intrinsic defect independent of fat mass in women with Turner's syndrome. Horm Res. 2006;65(2):69-75.
    • (2006) Horm Res , vol.65 , Issue.2 , pp. 69-75
    • Salgin, B.1    Amin, R.2    Yuen, K.3    Williams, R.M.4    Murgatroyd, P.5    Dunger, D.B.6
  • 11
    • 34250326306 scopus 로고    scopus 로고
    • Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genes
    • Jun
    • Rada-Iglesias A, Enroth S, Ameur A, et al. Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genes. Genome Res. 2007 Jun;17(6):708-19.
    • (2007) Genome Res , vol.17 , Issue.6 , pp. 708-719
    • Rada-Iglesias, A.1    Enroth, S.2    Ameur, A.3
  • 12
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: target recognition and regulatory functions
    • Jan 23
    • Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell. 2009 Jan 23;136(2):215-33.
    • (2009) Cell , vol.136 , Issue.2 , pp. 215-233
    • Bartel, D.P.1
  • 13
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • Jan 23
    • Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004 Jan 23;116(2):281-97.
    • (2004) Cell , vol.116 , Issue.2 , pp. 281-297
    • Bartel, D.P.1
  • 14
    • 68149180031 scopus 로고    scopus 로고
    • 2009Histone acetyltransferase GCN5 interferes with the miRNA pathway in Arabidopsis
    • Jul
    • Kim W, Benhamed M, Servet C, et al. Histone acetyltransferase GCN5 interferes with the miRNA pathway in Arabidopsis. Cell Res. 2009 Jul; 19(7):899-909.
    • Cell Res , vol.19 , Issue.7
    • Kim, W.1    Benhamed, M.2    Servet, C.3
  • 15
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
    • Oct 25
    • Subramanian A, Tamayo P, Mootha VK, et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15545-50.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , Issue.43 , pp. 15545-15550
    • Subramanian, A.1    Tamayo, P.2    Mootha, V.K.3
  • 16
    • 33847419142 scopus 로고    scopus 로고
    • Molecular definition of breast tumor heterogeneity
    • Mar
    • Shipitsin M, Campbell LL, Argani P, et al. Molecular definition of breast tumor heterogeneity. Cancer Cell. 2007 Mar;11(3):259-73.
    • (2007) Cancer Cell , vol.11 , Issue.3 , pp. 259-273
    • Shipitsin, M.1    Campbell, L.L.2    Argani, P.3
  • 17
    • 2642531973 scopus 로고    scopus 로고
    • Epigenetics in human disease and prospects for epigenetic therapy
    • May 27
    • Egger G, Liang G, Aparicio A, Jones PA. Epigenetics in human disease and prospects for epigenetic therapy. Nature. 2004 May 27;429(6990):457-63.
    • (2004) Nature , vol.429 , Issue.6990 , pp. 457-463
    • Egger, G.1    Liang, G.2    Aparicio, A.3    Jones, P.A.4
  • 18
    • 34347358721 scopus 로고    scopus 로고
    • Role of histone modification in chromatin dynamics
    • May
    • Ito T. Role of histone modification in chromatin dynamics. J Biochem. 2007 May;141(5):609-14.
    • (2007) J Biochem , vol.141 , Issue.5 , pp. 609-614
    • Ito, T.1
  • 19
    • 31544436888 scopus 로고    scopus 로고
    • Dietary HDAC inhibitors: time to rethink weak ligands in cancer chemoprevention?
    • Feb
    • Dashwood RH, Myzak MC, Ho E. Dietary HDAC inhibitors: time to rethink weak ligands in cancer chemoprevention? Carcinogenesis. 2006 Feb; 27(2):344-9.
    • (2006) Carcinogenesis , vol.27 , Issue.2 , pp. 344-349
    • Dashwood, R.H.1    Myzak, M.C.2    Ho, E.3
  • 20
    • 34249802923 scopus 로고    scopus 로고
    • Pathway analysis identifies perturbation of genetic networks induced by butyrate in a bovine kidney epithelial cell line
    • Jul
    • Li CJ, Li RW, Wang YH, Elsasser TH. Pathway analysis identifies perturbation of genetic networks induced by butyrate in a bovine kidney epithelial cell line. Funct Integr Genomics. 2007 Jul;7(3):193-205.
    • (2007) Funct Integr Genomics , vol.7 , Issue.3 , pp. 193-205
    • Li, C.J.1    Li, R.W.2    Wang, Y.H.3    Elsasser, T.H.4
  • 21
    • 0037009364 scopus 로고    scopus 로고
    • MicroRNA maturation: stepwise processing and subcellular localization
    • Sep 2
    • Lee Y, Jeon K, Lee JT, Kim S, Kim VN. MicroRNA maturation: stepwise processing and subcellular localization. EMBO J. 2002 Sep 2;21(17):4663-70.
    • (2002) EMBO J , vol.21 , Issue.17 , pp. 4663-4670
    • Lee, Y.1    Jeon, K.2    Lee, J.T.3    Kim, S.4    Kim, V.N.5
  • 22
    • 9344235449 scopus 로고    scopus 로고
    • Human microRNAs are processed from capped, polyadenylated transcripts that can also function as mRNAs
    • Dec
    • Cai X, Hagedorn CH, Cullen BR. Human microRNAs are processed from capped, polyadenylated transcripts that can also function as mRNAs. RNA. 2004 Dec;10(12):1957-66.
    • (2004) RNA , vol.10 , Issue.12 , pp. 1957-1966
    • Cai, X.1    Hagedorn, C.H.2    Cullen, B.R.3
  • 23
    • 8144225486 scopus 로고    scopus 로고
    • MicroRNA genes are transcribed by RNA polymerase II
    • Oct 13
    • Lee Y, Kim M, Han J, et al. MicroRNA genes are transcribed by RNA polymerase II. EMBO J. 2004 Oct 13;23(20):4051-60.
    • (2004) EMBO J , vol.23 , Issue.20 , pp. 4051-4060
    • Lee, Y.1    Kim, M.2    Han, J.3
  • 25
    • 28344438648 scopus 로고    scopus 로고
    • A minicircuitry comprised of microRNA-223 and transcription factors NFI-A and C/EBPalpha regulates human granulopoiesis
    • Dec 2
    • Fazi F, Rosa A, Fatica A, et al. A minicircuitry comprised of microRNA-223 and transcription factors NFI-A and C/EBPalpha regulates human granulopoiesis. Cell. 2005 Dec 2;123(5):819-31.
    • (2005) Cell , vol.123 , Issue.5 , pp. 819-831
    • Fazi, F.1    Rosa, A.2    Fatica, A.3
  • 26
    • 33744805399 scopus 로고    scopus 로고
    • Specific activation of microRNA-127 with downregulation of the proto-oncogene BCL6 by chromatin-modifying drugs in human cancer cells
    • Jun
    • Saito Y, Liang G, Egger G, et al. Specific activation of microRNA-127 with downregulation of the proto-oncogene BCL6 by chromatin-modifying drugs in human cancer cells. Cancer Cell. 2006 Jun;9(6):435-43.
    • (2006) Cancer Cell , vol.9 , Issue.6 , pp. 435-443
    • Saito, Y.1    Liang, G.2    Egger, G.3
  • 27
    • 32944462300 scopus 로고    scopus 로고
    • Rapid alteration of microRNA levels by histone deacetylase inhibition
    • Feb 1
    • Scott GK, Mattie MD, Berger CE, Benz SC, Benz CC. Rapid alteration of microRNA levels by histone deacetylase inhibition. Cancer Res. 2006 Feb 1;66(3):1277-81.
    • (2006) Cancer Res , vol.66 , Issue.3 , pp. 1277-1281
    • Scott, G.K.1    Mattie, M.D.2    Berger, C.E.3    Benz, S.C.4    Benz, C.C.5
  • 28
    • 70350731129 scopus 로고    scopus 로고
    • Epigenetic regulation of microRNA expression in colorectal cancer
    • Dec 1
    • Bandres E, Agirre X, Bitarte N, et al. Epigenetic regulation of microRNA expression in colorectal cancer. Int J Cancer. 2009 Dec 1;125(11): 2737-43.
    • (2009) Int J Cancer , vol.125 , Issue.11 , pp. 2737-2743
    • Bandres, E.1    Agirre, X.2    Bitarte, N.3
  • 29
    • 78649812261 scopus 로고    scopus 로고
    • Interplay between microRNAs and the epigentic machinery: An intricate network
    • DOI:10.1016/J.BBAGRM.2010.05.005
    • Iorio MV, Piovan C, Croce CM. Interplay between microRNAs and the epigentic machinery: An intricate network. Biochim Biophys Acta. 2010; DOI:10.1016/J.BBAGRM.2010.05.005.
    • (2010) Biochim Biophys Acta
    • Iorio, M.V.1    Piovan, C.2    Croce, C.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.