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Volumn 30, Issue 8, 2011, Pages 937-942

Use of loop-mediated isothermal amplification of DNA for the rapid detection of Mycobacterium tuberculosis in clinical specimens

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DNA 16S; DNA POLYMERASE; GENOMIC DNA; RNA 16S;

EID: 80051552957     PISSN: 09349723     EISSN: 14354373     Source Type: Journal    
DOI: 10.1007/s10096-011-1195-0     Document Type: Review
Times cited : (42)

References (25)
  • 1
    • 0028889845 scopus 로고
    • Global epidemiology of tuberculosis. Morbidity and mortality of a worldwide epidemic
    • 7807661 10.1001/jama.273.3.220 1:STN:280:DyaK2M7gs1Chtw%3D%3D
    • MC Raviglione DE Snider Jr A Kochi 1995 Global epidemiology of tuberculosis. Morbidity and mortality of a worldwide epidemic JAMA 273 220 226 7807661 10.1001/jama.273.3.220 1:STN:280:DyaK2M7gs1Chtw%3D%3D
    • (1995) JAMA , vol.273 , pp. 220-226
    • Raviglione, M.C.1    Snider Jr., D.E.2    Kochi, A.3
  • 3
    • 0026418667 scopus 로고
    • Nucleic acid sequence-based amplification
    • 1706072 10.1038/350091a0 1:STN:280:DyaK3M7mtlKnsQ%3D%3D
    • J Compton 1991 Nucleic acid sequence-based amplification Nature 350 91 92 1706072 10.1038/350091a0 1:STN:280:DyaK3M7mtlKnsQ%3D%3D
    • (1991) Nature , vol.350 , pp. 91-92
    • Compton, J.1
  • 4
    • 48749106920 scopus 로고    scopus 로고
    • Molecular diagnostic tools in mycobacteriology
    • 18599139 10.1016/j.mimet.2008.05.023 1:CAS:528:DC%2BD1cXps1GmtLs%3D
    • IK Neonakis Z Gitti E Krambovitis DA Spandidos 2008 Molecular diagnostic tools in mycobacteriology J Microbiol Methods 75 1 11 18599139 10.1016/j.mimet.2008.05.023 1:CAS:528:DC%2BD1cXps1GmtLs%3D
    • (2008) J Microbiol Methods , vol.75 , pp. 1-11
    • Neonakis, I.K.1    Gitti, Z.2    Krambovitis, E.3    Spandidos, D.A.4
  • 5
    • 0034658936 scopus 로고    scopus 로고
    • Loop-mediated isothermal amplification of DNA
    • 10.1093/nar/28.12.e63 10871386 10.1093/nar/28.12.e63 1:CAS:528: DC%2BD3cXmtlKqsr8%3D
    • T Notomi H Okayama H Masubuchi T Yonekawa K Watanabe N Amino T Hase 2000 Loop-mediated isothermal amplification of DNA Nucleic Acids Res 28 12 E63 10.1093/nar/28.12.e63 10871386 10.1093/nar/28.12.e63 1:CAS:528: DC%2BD3cXmtlKqsr8%3D
    • (2000) Nucleic Acids Res , vol.28 , Issue.12 , pp. 63
    • Notomi, T.1    Okayama, H.2    Masubuchi, H.3    Yonekawa, T.4    Watanabe, K.5    Amino, N.6    Hase, T.7
  • 6
    • 80051549256 scopus 로고    scopus 로고
    • Eiken Chemical Co., Ltd., Japan Accessed:10-1-2011
    • Eiken Chemical Co., Ltd., Japan (2011) LAMP principles. http://loopamp.eiken.co.jp/e/lamp/principle.html. Accessed: 10-1-2011
    • (2011) LAMP Principles
  • 7
    • 80051550473 scopus 로고    scopus 로고
    • Eiken Chemical Co., Ltd. Japan Accessed:10-1-2011
    • Eiken Chemical Co., Ltd. Japan (2011) LAMP animation. http://loopamp.eiken.co.jp/e/lamp/anim.html. Accessed: 10-1-2011
    • (2011) LAMP Animation
  • 8
    • 0035940965 scopus 로고    scopus 로고
    • Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation
    • DOI 10.1006/bbrc.2001.5921
    • Y Mori K Nagamine N Tomita T Notomi 2001 Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation Biochem Biophys Res Commun 289 150 154 11708792 10.1006/bbrc.2001.5921 1:CAS:528:DC%2BD3MXot12ht7Y%3D (Pubitemid 33108807)
    • (2001) Biochemical and Biophysical Research Communications , vol.289 , Issue.1 , pp. 150-154
    • Mori, Y.1    Nagamine, K.2    Tomita, N.3    Notomi, T.4
  • 9
    • 0023004757 scopus 로고
    • Methods for the estimation of serum magnesium in clinical laboratories
    • 3807425 1:CAS:528:DyaL2sXivFCjsA%3D%3D
    • MR Wills FW Sunderman J Savory 1986 Methods for the estimation of serum magnesium in clinical laboratories Magnesium 5 317 327 3807425 1:CAS:528:DyaL2sXivFCjsA%3D%3D
    • (1986) Magnesium , vol.5 , pp. 317-327
    • Wills, M.R.1    Sunderman, F.W.2    Savory, J.3
  • 10
    • 0034866656 scopus 로고    scopus 로고
    • Loop-mediated isothermal amplification reaction using a nondenatured template [1]
    • K Nagamine K Watanabe K Ohtsuka T Hase T Notomi 2001 Loop-mediated isothermal amplification reaction using a nondenatured template Clin Chem 47 1742 1743 11514425 1:CAS:528:DC%2BD3MXmtlShtr4%3D (Pubitemid 32781605)
    • (2001) Clinical Chemistry , vol.47 , Issue.9 , pp. 1742-1743
    • Nagamine, K.1    Watanabe, K.2    Ohtsuka, K.3    Hase, T.4    Notomi, T.5
  • 11
    • 0036599262 scopus 로고    scopus 로고
    • Accelerated reaction by loop-mediated isothermal amplification using loop primers
    • 12144774 10.1006/mcpr.2002.0415 1:CAS:528:DC%2BD38XlsFWqsr4%3D
    • K Nagamine T Hase T Notomi 2002 Accelerated reaction by loop-mediated isothermal amplification using loop primers Mol Cell Probes 16 223 229 12144774 10.1006/mcpr.2002.0415 1:CAS:528:DC%2BD38XlsFWqsr4%3D
    • (2002) Mol Cell Probes , vol.16 , pp. 223-229
    • Nagamine, K.1    Hase, T.2    Notomi, T.3
  • 12
    • 43149084823 scopus 로고    scopus 로고
    • Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products
    • DOI 10.1038/nprot.2008.57, PII NPROT.2008.57
    • N Tomita Y Mori H Kanda T Notomi 2008 Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products Nat Protoc 3 877 882 18451795 10.1038/nprot.2008.57 1:CAS:528: DC%2BD1cXltlSgsb8%3D (Pubitemid 351639031)
    • (2008) Nature Protocols , vol.3 , Issue.5 , pp. 877-882
    • Tomita, N.1    Mori, Y.2    Kanda, H.3    Notomi, T.4
  • 13
    • 0038519306 scopus 로고    scopus 로고
    • Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples
    • T Iwamoto T Sonobe K Hayashi 2003 Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples J Clin Microbiol 41 2616 2622 12791888 10.1128/JCM.41.6.2616-2622.2003 1:CAS:528:DC%2BD3sXlsValtLw%3D (Pubitemid 36712475)
    • (2003) Journal of Clinical Microbiology , vol.41 , Issue.6 , pp. 2616-2622
    • Iwamoto, T.1    Sonobe, T.2    Hayashi, K.3
  • 14
    • 68949101412 scopus 로고    scopus 로고
    • Use of visual loop-mediated isotheral amplification of rimM sequence for rapid detection of Mycobacterium tuberculosis and Mycobacterium bovis
    • 19616589 10.1016/j.mimet.2009.07.006 1:CAS:528:DC%2BD1MXhtVensb7L
    • RY Zhu KX Zhang MQ Zhao YH Liu YY Xu CM Ju B Li JD Chen 2009 Use of visual loop-mediated isotheral amplification of rimM sequence for rapid detection of Mycobacterium tuberculosis and Mycobacterium bovis J Microbiol Methods 78 339 343 19616589 10.1016/j.mimet.2009.07.006 1:CAS:528: DC%2BD1MXhtVensb7L
    • (2009) J Microbiol Methods , vol.78 , pp. 339-343
    • Zhu, R.Y.1    Zhang, K.X.2    Zhao, M.Q.3    Liu, Y.H.4    Xu, Y.Y.5    Ju, C.M.6    Li, B.7    Chen, J.D.8
  • 15
    • 34249892289 scopus 로고    scopus 로고
    • Operational feasibility of using loop-mediated isothermal amplification for diagnosis of pulmonary tuberculosis in microscopy centers of developing countries
    • DOI 10.1128/JCM.02352-06
    • CC Boehme P Nabeta G Henostroza R Raqib Z Rahim M Gerhardt E Sanga M Hoelscher T Notomi T Hase MD Perkins 2007 Operational feasibility of using loop-mediated isothermal amplification for diagnosis of pulmonary tuberculosis in microscopy centers of developing countries J Clin Microbiol 45 1936 1940 17392443 10.1128/JCM.02352-06 1:CAS:528:DC%2BD2sXnsVKqsLY%3D (Pubitemid 46933929)
    • (2007) Journal of Clinical Microbiology , vol.45 , Issue.6 , pp. 1936-1940
    • Boehme, C.C.1    Nabeta, P.2    Henostroza, G.3    Raqib, R.4    Rahim, Z.5    Gerhardt, M.6    Sanga, E.7    Hoelscher, M.8    Notomi, T.9    Hase, T.10    Perkins, M.D.11
  • 16
    • 58549117850 scopus 로고    scopus 로고
    • Evaluation of reverse transcription loop-mediated isothermal amplification in conjunction with ELISA-hybridization assay for molecular detection of Mycobacterium tuberculosis
    • 19022304 10.1016/j.mimet.2008.10.005 1:CAS:528:DC%2BD1MXhtFegurY%3D
    • MF Lee YH Chen CF Peng 2009 Evaluation of reverse transcription loop-mediated isothermal amplification in conjunction with ELISA-hybridization assay for molecular detection of Mycobacterium tuberculosis J Microbiol Methods 76 174 180 19022304 10.1016/j.mimet.2008.10.005 1:CAS:528:DC%2BD1MXhtFegurY%3D
    • (2009) J Microbiol Methods , vol.76 , pp. 174-180
    • Lee, M.F.1    Chen, Y.H.2    Peng, C.F.3
  • 18
    • 77649137058 scopus 로고    scopus 로고
    • A novel and more sensitive loop-mediated isothermal amplification assay targeting IS6110 for detection of Mycobacterium tuberculosis complex
    • 19515543 10.1016/j.micres.2009.05.001 1:CAS:528:DC%2BC3cXmtVCitbk%3D
    • E Aryan M Makvandi A Farajzadeh K Huygen P Bifani SL Mousavi A Fateh A Jelodar MM Gouya M Romano 2010 A novel and more sensitive loop-mediated isothermal amplification assay targeting IS6110 for detection of Mycobacterium tuberculosis complex Microbiol Res 165 211 220 19515543 10.1016/j.micres.2009. 05.001 1:CAS:528:DC%2BC3cXmtVCitbk%3D
    • (2010) Microbiol Res , vol.165 , pp. 211-220
    • Aryan, E.1    Makvandi, M.2    Farajzadeh, A.3    Huygen, K.4    Bifani, P.5    Mousavi, S.L.6    Fateh, A.7    Jelodar, A.8    Gouya, M.M.9    Romano, M.10
  • 19
    • 80051552644 scopus 로고    scopus 로고
    • Eiken Chemical Co. Ltd., Tokyo, Japan http://primerexplorer.jp/elamp3.0. 0/index.htmlandNetLaboratorysoftware http://primerexplorer.jp/e/index.html. Accessed:10-1-2011
    • Eiken Chemical Co. Ltd., Tokyo, Japan (2011) PrimerExplorer V4 software http://primerexplorer.jp/elamp4.0.0/index.html ; PrimerExplorer V3 software http://primerexplorer.jp/elamp3.0.0/index.html and Net Laboratory software http://primerexplorer.jp/e/index.html. Accessed: 10-1-2011
    • (2011) PrimerExplorer V4 Software
  • 20
    • 0024449299 scopus 로고
    • A rapid method for the detection of potentially viable Mycobacterium leprae in human biopsies: A novel application of PCR
    • DOI 10.1016/0378-1097(89)90235-8
    • SA Woods ST Cole 1989 A rapid method for the detection of potentially viable Mycobacterium leprae in human biopsies: a novel application of PCR FEMS Microbiol Lett 53 305 309 2693204 10.1111/j.1574-6968.1989.tb03678.x 1:STN:280:DyaK3c7ivVaisg%3D%3D (Pubitemid 19282540)
    • (1989) FEMS Microbiology Letters , vol.65 , Issue.3 , pp. 305-309
    • Woods, S.A.1    Cole, S.T.2
  • 21
    • 18544387632 scopus 로고    scopus 로고
    • Comparison of six methods of extracting Mycobacterium tuberculosis DNA from processed sputum for testing by quantitative real-time PCR
    • DOI 10.1128/JCM.43.5.2471-2473.2005
    • WK Aldous JI Pounder JL Cloud GL Woods 2005 Comparison of six methods of extracting Mycobacterium tuberculosis DNA from processed sputum for testing by quantitative real-time PCR J Clin Microbiol 43 2471 2473 15872286 10.1128/JCM.43.5.2471-2473.2005 1:CAS:528:DC%2BD2MXkvFOqtLs%3D (Pubitemid 40656270)
    • (2005) Journal of Clinical Microbiology , vol.43 , Issue.5 , pp. 2471-2473
    • Aldous, W.K.1    Pounder, J.I.2    Cloud, J.L.3    Woods, G.L.4
  • 22
    • 78650206555 scopus 로고    scopus 로고
    • Efficacy of loop mediated isothermal amplification (LAMP) assay for the laboratory identification of Mycobacterium tuberculosis isolates in a resource limited setting
    • 10.1016/j.mimet.2010.10.015 21047534 10.1016/j.mimet.2010.10.015
    • G Geojith S Dhanasekaran SP Chandran J Kenneth 2010 Efficacy of loop mediated isothermal amplification (LAMP) assay for the laboratory identification of Mycobacterium tuberculosis isolates in a resource limited setting J Microbiol Methods 84 71 73 10.1016/j.mimet.2010.10.015 21047534 10.1016/j.mimet.2010.10.015
    • (2010) J Microbiol Methods , vol.84 , pp. 71-73
    • Geojith, G.1    Dhanasekaran, S.2    Chandran, S.P.3    Kenneth, J.4
  • 23
    • 0029999071 scopus 로고    scopus 로고
    • Polymerase chain reaction for diagnosis of M. tuberculosis: Comparison of simple boiling and a conventional method for DNA extraction
    • DOI 10.1006/bmme.1996.0003
    • B Afghani HR Stutman 1996 Polymerase chain reaction for diagnosis of M. tuberculosis: comparison of simple boiling and a conventional method for DNA extraction Biochem Mol Med 57 14 18 8812720 10.1006/bmme.1996.0003 1:CAS:528:DyaK28Xit1Oiurk%3D (Pubitemid 26112641)
    • (1996) Biochemical and Molecular Medicine , vol.57 , Issue.1 , pp. 14-18
    • Afghani, B.1    Stutman, H.R.2
  • 24
    • 2442610695 scopus 로고    scopus 로고
    • Real-time turbidimetry of LAMP reaction for quantifying template DNA
    • DOI 10.1016/j.jbbm.2003.12.005, PII S0165022X03002173
    • Y Mori M Kitao N Tomita T Notomi 2004 Real-time turbidimetry of LAMP reaction for quantifying template DNA J Biochem Biophys Methods 59 145 157 15163526 10.1016/j.jbbm.2003.12.005 1:CAS:528:DC%2BD2cXktF2lsL8%3D (Pubitemid 38639920)
    • (2004) Journal of Biochemical and Biophysical Methods , vol.59 , Issue.2 , pp. 145-157
    • Mori, Y.1    Kitao, M.2    Tomita, N.3    Notomi, T.4
  • 25
    • 65349100762 scopus 로고    scopus 로고
    • Loop-mediated isothermal amplification (LAMP): A rapid, accurate, and cost-effective diagnostic method for infectious diseases
    • 19396514 10.1007/s10156-009-0669-9 1:CAS:528:DC%2BD1MXltVagtr0%3D
    • Y Mori T Notomi 2009 Loop-mediated isothermal amplification (LAMP): a rapid, accurate, and cost-effective diagnostic method for infectious diseases J Infect Chemother 15 62 69 19396514 10.1007/s10156-009-0669-9 1:CAS:528:DC%2BD1MXltVagtr0%3D
    • (2009) J Infect Chemother , vol.15 , pp. 62-69
    • Mori, Y.1    Notomi, T.2


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