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Volumn 68, Issue 1, 2011, Pages 121-128

Genetic variation and demographic contraction of the remnant populations of Mexican caribbean pine (Pinus caribaea var. hondurensis: Pinaceae)

Author keywords

Caribbean pine; Conservation; Mexico; Nuclear microsatellites; Population genetics

Indexed keywords

CONIFEROUS FOREST; CONSERVATION GENETICS; CONSERVATION MANAGEMENT; DEMOGRAPHIC TRANSITION; EFFECTIVE POPULATION SIZE; ENDANGERED SPECIES; GENETIC DIFFERENTIATION; GENETIC MARKER; GEOGRAPHICAL DISTRIBUTION; INBREEDING; ISOLATED POPULATION; MIGRATION; NATIVE SPECIES; PATCHINESS; POPULATION BOTTLENECK;

EID: 80051533476     PISSN: 12864560     EISSN: 1297966X     Source Type: Journal    
DOI: 10.1007/s13595-011-0013-2     Document Type: Conference Paper
Times cited : (11)

References (32)
  • 1
    • 1942485972 scopus 로고    scopus 로고
    • An ancient bottleneck in the Lost Pines of central Texas
    • DOI 10.1111/j.1365-294X.2004.02142.x
    • Al-Rabab'ah MA, Williams CG (2004) An ancient bottleneck in the Lost Pines of central Texas. Mol Ecol 13:1075-1084 (Pubitemid 38504414)
    • (2004) Molecular Ecology , vol.13 , Issue.5 , pp. 1075-1084
    • Al-Rabab'ah, M.A.1    Williams, C.G.2
  • 2
    • 32144440085 scopus 로고    scopus 로고
    • Comparison of Bayesian and maximum-likelihood inference of population genetic parameters
    • DOI 10.1093/bioinformatics/bti803
    • Beerli P (2006) Comparison of Bayesian and maximum-likelihood inference of population genetic parameters. Bioinformatics 22:341-345 (Pubitemid 43205381)
    • (2006) Bioinformatics , vol.22 , Issue.3 , pp. 341-345
    • Beerli, P.1
  • 4
    • 0027027690 scopus 로고
    • Pollination viability analysis
    • Boyce MS (1992) Pollination viability analysis. Ann Rev Ecol Syst 23:481-506
    • (1992) Ann Rev Ecol Syst , vol.23 , pp. 481-506
    • Boyce, M.S.1
  • 5
    • 18244394286 scopus 로고    scopus 로고
    • Microsatellite analysis reveals genetically distinct populations of red pine (Pinus resinosa, Pinaceae)
    • Boys J, Cherry M, Dayanandan S (2005) Microsatellite analysis reveals genetically distinct populations of red pine (Pinus resinosa, Pinaceae). Am J Bot 92:833-841 (Pubitemid 40631106)
    • (2005) American Journal of Botany , vol.92 , Issue.5 , pp. 833-841
    • Boys, J.1    Cherry, M.2    Dayanandan, S.3
  • 6
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet JM, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144:2001-2014 (Pubitemid 26427944)
    • (1996) Genetics , vol.144 , Issue.4 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 8
    • 70349271367 scopus 로고    scopus 로고
    • Genetic diversity and gene exchange in Pinus oocarpa, a Mesoamerican pine with resistance to the pitch canker fungus (Fusarium circinatum)
    • Dvorak WS, Potter KM, Hipkins VD, Hodge GR (2009) Genetic diversity and gene exchange in Pinus oocarpa, a Mesoamerican pine with resistance to the pitch canker fungus (Fusarium circinatum). Int J Plant Sci 170:609-626
    • (2009) Int J Plant Sci , vol.170 , pp. 609-626
    • Dvorak, W.S.1    Potter, K.M.2    Hipkins, V.D.3    Hodge, G.R.4
  • 9
    • 0030377876 scopus 로고    scopus 로고
    • Characterization of microsatellite markers in eastern white pine
    • Echt CS, Marquardt PM, Hseih M, Zahorchak RR (1996) Characterization of microsatellite markers in eastern white pine. Genome 39:1102-1108 (Pubitemid 27513833)
    • (1996) Genome , vol.39 , Issue.6 , pp. 1102-1108
    • Echt, C.S.1    May-Marquardt, P.2    Hseih, M.3    Zahorchak, R.4
  • 11
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin, ver 3.0: An integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S (2005) Arlequin, ver 3.0: an integrated software package for population genetics data analysis. Evol Bioinf Online 1:47-50
    • (2005) Evol Bioinf Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 14
    • 33747069355 scopus 로고    scopus 로고
    • Decoupled mitochondrial and chloroplast DNA population structure reveals Holocene collapse and population isolation in a threatened Mexican-endemic conifer
    • DOI 10.1111/j.1365-294X.2006.02974.x
    • Jaramillo-Correa JP, Beaulieu J, Ledig T, Bousquet J (2006) Decoupled mitochondrial and chloroplast DNA population structure reveals Holocene collapse and population isolation in a threatened Mexican-endemic conifer. Mol Ecol 15:2787-2800 (Pubitemid 44215453)
    • (2006) Molecular Ecology , vol.15 , Issue.10 , pp. 2787-2800
    • Jaramillo-Correa, J.P.1    Beaulieu, J.2    Ledig, F.T.3    Bousquet, J.4
  • 15
    • 33645071326 scopus 로고    scopus 로고
    • Analysis of microsatellite variation in Pinus radiata reveals effects of genetic drift but no recent bottlenecks
    • Karhu A, Vogl C, Moran GF, Bell JC, Savolainen O (2005) Analysis of microsatellite variation in Pinus radiata reveals effects of genetic drift but no recent bottlenecks. J Evol Biol 19:167-175
    • (2005) J Evol Biol , vol.19 , pp. 167-175
    • Karhu, A.1    Vogl, C.2    Moran, G.F.3    Bell, J.C.4    Savolainen, O.5
  • 16
    • 0018191975 scopus 로고
    • Stepwise mutation model and distribution of allelic frequences in finite populations
    • Kimura M, Otha T (1978) Stepwise mutation model and distribution of allelic frequences in finite populations. Proc Natl Acad Sci USA 75:2868-2987
    • (1978) Proc Natl Acad Sci USA , vol.75 , pp. 2868-2987
    • Kimura, M.1    Otha, T.2
  • 17
    • 0027331845 scopus 로고
    • Risk of population extinction from demographic and environmental stochasticity and random catastrophes
    • Lande R (1993) Risk of population extinction from demographic and environmental stochasticity and random catastrophes. Am Nat 142:911-927
    • (1993) Am Nat , vol.142 , pp. 911-927
    • Lande, R.1
  • 18
    • 0000668960 scopus 로고    scopus 로고
    • Genetic variation in Pinus
    • Richardson DM ed, Cambridge University Press, Cambridge
    • Ledig FT (1998) Genetic variation in Pinus. In: Richardson DM (ed) Ecology and biogeography of Pinus. Cambridge University Press, Cambridge, pp 251-280
    • (1998) Ecology and Biogeography of Pinus , pp. 251-280
    • Ledig, F.T.1
  • 19
    • 0033042827 scopus 로고    scopus 로고
    • Evidence for an extreme bottleneck in a rare Mexican pinyon: Genetic diversity, disequilibrium, and the mating system in Pinus maximartinezii
    • Ledig FT, Conkle MT, Bermejo-Velazquez B, Eguiluz-Piedra T, Hodgskiss PD, Johnson DR, Dvorak WS (1999) Evidence for an extreme bottleneck in a rare Mexican pinyon: genetic diversity, disequilibrium, and the mating system in Pinus maximartinezii. Evolution 53:91-99 (Pubitemid 29300661)
    • (1999) Evolution , vol.53 , Issue.1 , pp. 91-99
    • Ledig, F.T.1    Conkle, M.T.2    Bermejo-Velaquez, B.3    Eguiluz-Piedra, T.4    Hodgskiss, P.D.5    Johnson, D.R.6    Dvorak, W.S.7
  • 20
    • 0031859947 scopus 로고    scopus 로고
    • Cultural and climatic history of Cobá, a lowland Maya City in Quintana Roo
    • Leyden BW, Brenner M, Dahlin BH (1998) Cultural and climatic history of Cobá, a lowland Maya City in Quintana Roo. México Quat Res 49:11-122
    • (1998) México Quat Res , vol.49 , pp. 11-122
    • Leyden, B.W.1    Brenner, M.2    Dahlin, B.H.3
  • 21
    • 0031866781 scopus 로고    scopus 로고
    • Distortion of allele frequency distributions provides a test for recent population bottlenecks
    • DOI 10.1093/jhered/89.3.238
    • Luikart G, Allendorf FW, Cornuet JM, Sherwin WB (1998) Distortion of alleles frequency distributions provides a test for recent population bottlenecks. J Hered 89:238-247 (Pubitemid 28292519)
    • (1998) Journal of Heredity , vol.89 , Issue.3 , pp. 238-247
    • Luikart, G.1    Allendorf, F.W.2    Cornuet, J.-M.3    Sherwin, W.B.4
  • 22
    • 33749327924 scopus 로고    scopus 로고
    • Estructura y composición de una comunidad de Pinus caribaea var. hondurensis (Sénecl) Barr. Et Golf., en el estado de Quintana Roo
    • Macario M P A, Torres PS, Cabrera CE (1998) Estructura y composición de una comunidad de Pinus caribaea var. hondurensis (Sénecl) Barr. Et Golf., en el estado de Quintana Roo. México Caribb J Sci 34:50-57
    • (1998) México Caribb J Sci , vol.34 , pp. 50-57
    • Macario, M.P.A.1    Torres, P.S.2    Cabrera, C.E.3
  • 23
    • 0022352290 scopus 로고
    • Population bottlenecks and nonequilibrium models in population genetics. II. Number of alleles in a small population that was formed by a recent bottleneck
    • Maruyama T, Fuerst PA (1985) Population bottlenecks and nonequilibrium models in population genetics II. Number of alleles in a small population that was formed by a recent bottleneck. Genetics 111:675-689 (Pubitemid 16183475)
    • (1985) Genetics , vol.111 , Issue.3 , pp. 675-689
    • Maruyama, T.1    Fuerst, P.A.2
  • 24
    • 80051483150 scopus 로고
    • Influence of flowering habit of Pinus caribaea var. hondurensis Barr. et Golf on seed yield
    • Okoro OO (1983) Influence of flowering habit of Pinus caribaea var. hondurensis Barr. et Golf on seed yield. Niger J For 13:36-42
    • (1983) Niger J for , vol.13 , pp. 36-42
    • Okoro, O.O.1
  • 25
    • 14844333578 scopus 로고    scopus 로고
    • Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations
    • DOI 10.1111/j.1365-294X.2004.02410.x
    • Petit JR, Duminil J, Fineschi S, Hampe A, Salvini D, Vendramin GG (2005) Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Mol Ecol 14:689-701 (Pubitemid 40346461)
    • (2005) Molecular Ecology , vol.14 , Issue.3 , pp. 689-701
    • Petit, R.J.1    Duminil, J.2    Fineschi, S.3    Hampe, A.4    Salvini, D.5    Vendramin, G.G.6
  • 26
    • 0032880393 scopus 로고    scopus 로고
    • BOTTLENECK: A computer program for detecting recent reductions in the effective population size using allele frequency data
    • DOI 10.1093/jhered/90.4.502
    • Piry S, Luikart G, Cornuet JM (1999) Bottleneck: a computer program for detecting recent reductions in the effective population size using allele frequency data. J Heredity 90:502-503 (Pubitemid 29416458)
    • (1999) Journal of Heredity , vol.90 , Issue.4 , pp. 502-503
    • Piry, S.1    Luikart, G.2    Cornuet, J.-M.3
  • 27
    • 0000905848 scopus 로고
    • Minimum population sizes for species conservation
    • Shaffer ML (1981) Minimum population sizes for species conservation. Bioscience 31:131-134
    • (1981) Bioscience , vol.31 , pp. 131-134
    • Shaffer, M.L.1
  • 29
    • 0028675538 scopus 로고
    • Occurrence and inheritance of microsatellites in Pinus radiata
    • Smith DN, Devey ME (1994) Occurrence and inheritance of microsatellites in Pinus radiata. Genome 37:977-983
    • (1994) Genome , vol.37 , pp. 977-983
    • Smith, D.N.1    Devey, M.E.2
  • 30
    • 4344606590 scopus 로고    scopus 로고
    • MICRO-CHECKER: Software for identifying and correcting genotyping errors in microsatellite data
    • DOI 10.1111/j.1471-8286.2004.00684.x
    • Van Oosterhout C, Hutchinson WF, Wills D P M, Shipley P (2004) Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535-538 (Pubitemid 39147523)
    • (2004) Molecular Ecology Notes , vol.4 , Issue.3 , pp. 535-538
    • Van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3    Shipley, P.4
  • 32
    • 0000862605 scopus 로고
    • The interpretation of population structure by F-statistics with special regard to systems of mating
    • Wright S (1965) The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 19:395-420
    • (1965) Evolution , vol.19 , pp. 395-420
    • Wright, S.1


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