-
1
-
-
0015057741
-
Beginning a genetic analysis of conjugational transfer determined by the F factor in Escherichia coli by isolation and characterization of transfer-deficient mutants
-
4929865
-
Achtman M. Willetts N. Clark A.J. 1971. Beginning a genetic analysis of conjugational transfer determined by the F factor in Escherichia coli by isolation and characterization of transfer-deficient mutants. J. Bacteriol. 106 (2): 529-538. 4929865
-
(1971)
J. Bacteriol.
, vol.106
, Issue.2
, pp. 529-538
-
-
Achtman, M.1
Willetts, N.2
Clark, A.J.3
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul S.F. Madden T.L. Schaffer A.A. Zhang J. Zhang Z. Miller W. Lipman D.J. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (17): 3389-3402. 10.1093/nar/25.17.3389 9254694 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
27144489108
-
Protein database searches using compositionally adjusted substitution matrices
-
DOI 10.1111/j.1742-4658.2005.04945.x
-
Altschul S.F. Wootton J.C. Gertz E.M. Agarwala R. Morgulis A. Schaffer A.A. Yu Y.-K. 2005. Protein database searches using compositionally adjusted substitution matrices. FEBS J. 272 (20): 5101-5109. 10.1111/j.1742-4658.2005. 04945.x 16218944 (Pubitemid 41503143)
-
(2005)
FEBS Journal
, vol.272
, Issue.20
, pp. 5101-5109
-
-
Altschul, S.F.1
Wootton, J.C.2
Gertz, E.M.3
Agarwala, R.4
Morgulis, A.5
Schaffer, A.A.6
Yu, Y.-K.7
-
4
-
-
9944235916
-
The role of cysteine residues as redox-sensitive regulatory switches
-
DOI 10.1016/j.sbi.2004.09.012, PII S0959440X04001769
-
Barford D. 2004. The role of cysteine residues as redox-sensitive regulatory switches. Curr. Opin. Struct. Biol. 14 (6): 679-686. 10.1016/j.sbi.2004.09.012 15582391 (Pubitemid 39592578)
-
(2004)
Current Opinion in Structural Biology
, vol.14
, Issue.6
, pp. 679-686
-
-
Barford, D.1
-
5
-
-
0017129243
-
Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu
-
10.1016/0022-2836(76)90119-4 781293
-
Casadaban M.J. 1976. Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu. J. Mol. Biol. 104 (3): 541-555. 10.1016/0022-2836(76)90119-4 781293
-
(1976)
J. Mol. Biol.
, vol.104
, Issue.3
, pp. 541-555
-
-
Casadaban, M.J.1
-
7
-
-
77954737999
-
Regulation of bacterial conjugation: Balancing opportunity with adversity
-
10.2217/fmb.10.70 20632805
-
Frost L.S. Koraimann G. 2010. Regulation of bacterial conjugation: balancing opportunity with adversity. Future Microbiol. 5 (7): 1057-1071. 10.2217/fmb.10.70 20632805
-
(2010)
Future Microbiol.
, vol.5
, Issue.7
, pp. 1057-1071
-
-
Frost, L.S.1
Koraimann, G.2
-
8
-
-
0031665134
-
- phenocopies: Characterization of expression of the F transfer region in stationary phase
-
- phenocopies: characterization of expression of the F transfer region in stationary phase. Microbiology, 144 (9): 2579-2587. 10.1099/00221287-144-9-2579 9782507 (Pubitemid 28457168)
-
(1998)
Microbiology
, vol.144
, Issue.9
, pp. 2579-2587
-
-
Frost, L.S.1
Manchak, J.2
-
9
-
-
0028335140
-
Analysis of the sequence and gene products of the transfer region of the F sex factor
-
7915817
-
Frost L.S. Ippen-Ihler K. Skurray R.A. 1994. Analysis of the sequence and gene products of the transfer region of the F sex factor. Microbiol. Rev. 58 (2): 162-210. 7915817
-
(1994)
Microbiol. Rev.
, vol.58
, Issue.2
, pp. 162-210
-
-
Frost, L.S.1
Ippen-Ihler, K.2
Skurray, R.A.3
-
11
-
-
0034116376
-
The PAS superfamily: Sensors of environmental and developmental signals
-
DOI 10.1146/annurev.pharmtox.40.1.519
-
Gu Y.Z. Hogenesch J.B. Bradfield C.A. 2000. The PAS superfamily: sensors of environmental and developmental signals. Annu. Rev. Pharmacol. Toxicol. 40 (1): 519-561. 10.1146/annurev.pharmtox.40.1.519 10836146 (Pubitemid 30340692)
-
(2000)
Annual Review of Pharmacology and Toxicology
, vol.40
, pp. 519-561
-
-
Gu, Y.-Z.1
Hogenesch, J.B.2
Bradfield, C.A.3
-
12
-
-
0036785174
-
The positive regulator, TraJ, of the Escherichia coli F plasmid is unstable in a cpxA* background
-
10.1128/JB.184.20.5781-5788.2002 12270837
-
Gubbins M.J. Lau I. Will W.R. Manchak J.M. Raivio T.L. Frost L.S. 2002. The positive regulator, TraJ, of the Escherichia coli F plasmid is unstable in a cpxA* background. J. Bacteriol. 184 (20): 5781-5788. 10.1128/JB.184.20. 5781-5788.2002 12270837
-
(2002)
J. Bacteriol.
, vol.184
, Issue.20
, pp. 5781-5788
-
-
Gubbins, M.J.1
Lau, I.2
Will, W.R.3
Manchak, J.M.4
Raivio, T.L.5
Frost, L.S.6
-
13
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
7608087
-
Guzman L.M. Belin D. Carson M.J. Beckwith J. 1995. Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J. Bacteriol. 177 (14): 4121-4130. 7608087
-
(1995)
J. Bacteriol.
, vol.177
, Issue.14
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
14
-
-
0020959710
-
Studies on transformation of Escherichia coli with plasmids
-
Hanahan D. 1983. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166 (4): 557-580. 10.1016/S0022-2836(83)80284-8 6345791 (Pubitemid 13027898)
-
(1983)
Journal of Molecular Biology
, vol.166
, Issue.4
, pp. 557-580
-
-
Hanahan, D.1
-
15
-
-
37749018166
-
Activation of the Cpx regulon destabilizes the F plasmid transfer activator, TraJ, via the HslVU protease in Escherichia coli
-
10.1111/j.1365-2958.2007.06055.x 18069965
-
Lau-Wong I.C. Locke T. Ellison M.J. Raivio T.L. Frost L.S. 2008. Activation of the Cpx regulon destabilizes the F plasmid transfer activator, TraJ, via the HslVU protease in Escherichia coli. Mol. Microbiol. 67 (3): 516-527. 10.1111/j.1365-2958.2007.06055.x 18069965
-
(2008)
Mol. Microbiol.
, vol.67
, Issue.3
, pp. 516-527
-
-
Lau-Wong, I.C.1
Locke, T.2
Ellison, M.J.3
Raivio, T.L.4
Frost, L.S.5
-
18
-
-
27744589294
-
S (RpoS) in E. coli
-
DOI 10.1101/gad.353705
-
Mika F. Hengge R. 2005. A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of σS (RpoS) in E. coli. Genes Dev. 19 (22): 2770-2781. 10.1101/gad.353705 16291649 (Pubitemid 41627942)
-
(2005)
Genes and Development
, vol.19
, Issue.22
, pp. 2770-2781
-
-
Mika, F.1
Hengge, R.2
-
19
-
-
70349777587
-
Structure and signaling mechanism of Per-ARNT-Sim domains
-
10.1016/j.str.2009.08.011 19836329
-
Möglich A. Ayers R.A. Moffat K. 2009. Structure and signaling mechanism of Per-ARNT-Sim domains. Structure, 17 (10): 1282-1294. 10.1016/j.str.2009.08.011 19836329
-
(2009)
Structure
, vol.17
, Issue.10
, pp. 1282-1294
-
-
Möglich, A.1
Ayers, R.A.2
Moffat, K.3
-
20
-
-
0141492988
-
Thiol-Based Regulatory Switches
-
DOI 10.1146/annurev.genet.37.110801.142538
-
Paget M.S. Buttner M.J. 2003. Thiol-based regulatory switches. Annu. Rev. Genet. 37 (1): 91-121. 10.1146/annurev.genet.37.110801.142538 14616057 (Pubitemid 38041422)
-
(2003)
Annual Review of Genetics
, vol.37
, pp. 91-121
-
-
Paget, M.S.B.1
Buttner, M.J.2
-
21
-
-
0016717761
-
Metal chelate affinity chromatography, a new approach to protein fractionation
-
10.1038/258598a0 1678
-
Porath J. Carlsson J. Olsson I. Belfrage G. 1975. Metal chelate affinity chromatography, a new approach to protein fractionation. Nature, 258 (5536): 598-599. 10.1038/258598a0 1678
-
(1975)
Nature
, vol.258
, Issue.5536
, pp. 598-599
-
-
Porath, J.1
Carlsson, J.2
Olsson, I.3
Belfrage, G.4
-
22
-
-
77956048953
-
The F plasmid transfer activator TraJ is a dimeric helix-turn-helix DNA binding protein
-
10.1111/j.1574-6968.2010.02064.x 20695900
-
Rodriguez-Maillard J.M. Arutyunov D. Frost L.S. 2010. The F plasmid transfer activator TraJ is a dimeric helix-turn-helix DNA binding protein. FEMS Microbiol. Lett. 310 (2): 112-119. 10.1111/j.1574-6968.2010.02064.x 20695900
-
(2010)
FEMS Microbiol. Lett.
, vol.310
, Issue.2
, pp. 112-119
-
-
Rodriguez-Maillard, J.M.1
Arutyunov, D.2
Frost, L.S.3
-
23
-
-
77954065271
-
I-TASSER: A unified platform for automated protein structure and function prediction
-
10.1038/nprot.2010.5 20360767
-
Roy A. Kucukural A. Zhang Y. 2010. I-TASSER: a unified platform for automated protein structure and function prediction. Nat. Protoc. 5 (4): 725-738. 10.1038/nprot.2010.5 20360767
-
(2010)
Nat. Protoc.
, vol.5
, Issue.4
, pp. 725-738
-
-
Roy, A.1
Kucukural, A.2
Zhang, Y.3
-
24
-
-
77954746762
-
Regulation of bacterial conjugation in microaerobiosis by host-encoded functions ArcAB and SdhABCD
-
10.1534/genetics.109.109918 20083612
-
Serna A. Espinosa E. Camacho E.M. Casadesus J. 2010. Regulation of bacterial conjugation in microaerobiosis by host-encoded functions ArcAB and SdhABCD. Genetics, 184 (4): 947-958. 10.1534/genetics.109.109918 20083612
-
(2010)
Genetics
, vol.184
, Issue.4
, pp. 947-958
-
-
Serna, A.1
Espinosa, E.2
Camacho, E.M.3
Casadesus, J.4
-
25
-
-
33947296922
-
Discriminating behavior of metal ions and ligands with regard to their biological significance
-
10.1021/ar50030a004
-
Sigel H. McCormick D.B. 1970. Discriminating behavior of metal ions and ligands with regard to their biological significance. Acc. Chem. Res. 3 (6): 201-208. 10.1021/ar50030a004
-
(1970)
Acc. Chem. Res.
, vol.3
, Issue.6
, pp. 201-208
-
-
Sigel, H.1
McCormick, D.B.2
-
26
-
-
0026101634
-
Regulation of the F plasmid tra Y promoter in Escherichia coli by host and plasmid factors
-
Silverman P.M. Wickersham E. Harris R. 1991. Regulation of the F plasmid traY promoter in Escherichia coli by host and plasmid factors. J. Mol. Biol. 218 (1): 119-128. 10.1016/0022-2836(91)90878-A 2002497 (Pubitemid 121003333)
-
(1991)
Journal of Molecular Biology
, vol.218
, Issue.1
, pp. 119-128
-
-
Silverman, P.M.1
Wickersham, E.2
Harris, R.3
-
27
-
-
0032571319
-
Signal transduction and bacterial conjugation: Characterization of the role of ArcA in regulating conjugative transfer of the resistance plasmid R1
-
DOI 10.1006/jmbi.1997.1598
-
Strohmaier H. Noiges R. Kotschan S. Sawers G. Högenauer G. Zechner E.L. Koraimann G. 1998. Signal transduction and bacterial conjugation: characterization of the role of ArcA in regulating conjugative transfer of the resistance plasmid R1. J. Mol. Biol. 277 (2): 309-316. 10.1006/jmbi.1997.1598 9514749 (Pubitemid 28174970)
-
(1998)
Journal of Molecular Biology
, vol.277
, Issue.2
, pp. 309-316
-
-
Strohmaier, H.1
Noiges, R.2
Kotschan, S.3
Sawers, G.4
Hogenauer, G.5
Zechner, E.L.6
Koraimann, G.7
-
28
-
-
0011837480
-
Gene recombination in the bacterium Escherichia coli
-
Tatum E.L. Lederberg J. 1947. Gene recombination in the bacterium Escherichia coli. J. Bacteriol. 53 (6): 673-684.
-
(1947)
J. Bacteriol.
, vol.53
, Issue.6
, pp. 673-684
-
-
Tatum, E.L.1
Lederberg, J.2
-
29
-
-
0032990441
-
PAS domains: Internal sensors of oxygen, redox potential, and light
-
Taylor B.L. Zhulin I.B. 1999. PAS domains: internal sensors of oxygen, redox potential, and light. Microbiol. Mol. Biol. Rev. 63 (2): 479-506. 10357859 (Pubitemid 29264980)
-
(1999)
Microbiology and Molecular Biology Reviews
, vol.63
, Issue.2
, pp. 479-506
-
-
Taylor, B.L.1
Zhulin, I.B.2
-
30
-
-
0037009372
-
The crystal structure of the quorum sensing protein TraR bound to its autoinducer and target DNA
-
DOI 10.1093/emboj/cdf459
-
Vannini A. Volpari C. Gargioli C. Muraglia E. Cortese R. De Francesco R. et al. 2002. The crystal structure of the quorum sensing protein TraR bound to its autoinducer and target DNA. EMBO J. 21 (17): 4393-4401. 10.1093/emboj/cdf459 12198141 (Pubitemid 34984326)
-
(2002)
EMBO Journal
, vol.21
, Issue.17
, pp. 4393-4401
-
-
Vannini, A.1
Volpari, C.2
Gargioli, C.3
Muraglia, E.4
Cortese, R.5
De Francesco, R.6
Neddermann, P.7
Di Marco, S.8
-
31
-
-
30744437713
-
Characterization of the opposing roles of H-NS and TraJ in transcriptional regulation of the F-plasmid tra operon
-
DOI 10.1128/JB.188.2.507-514.2006
-
Will W.R. Frost L.S. 2006. Characterization of the opposing roles of H-NS and TraJ in transcriptional regulation of the F-plasmid tra operon. J. Bacteriol. 188 (2): 507-514. 10.1128/JB.188.2.507-514.2006 16385041 (Pubitemid 43100539)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.2
, pp. 507-514
-
-
Will, W.R.1
Frost, L.S.2
-
32
-
-
7644241959
-
The role of H-NS in silencing F transfer gene expression during entry into stationary phase
-
DOI 10.1111/j.1365-2958.2004.04303.x
-
Will W.R. Lu J. Frost L.S. 2004. The role of H-NS in silencing F transfer gene expression during entry into stationary phase. Mol. Microbiol. 54 (3): 769-782. 10.1111/j.1365-2958.2004.04303.x 15491366 (Pubitemid 39457297)
-
(2004)
Molecular Microbiology
, vol.54
, Issue.3
, pp. 769-782
-
-
Will, W.R.1
Lu, J.2
Frost, L.S.3
-
33
-
-
0017380834
-
The transcriptional control of fertility in F like plasmids
-
Willetts N. 1977. The transcriptional control of fertility in F-like plasmids. J. Mol. Biol. 112 (1): 141-148. 10.1016/S0022-2836(77)80161-7 881726 (Pubitemid 8096609)
-
(1977)
Journal of Molecular Biology
, vol.112
, Issue.1
, pp. 141-148
-
-
Willetts, N.1
-
34
-
-
39449115394
-
I-TASSER server for protein 3D structure prediction
-
DOI 10.1186/1471-2105-9-40
-
Zhang Y. 2008. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9 (1): 40. 10.1186/1471-2105-9-40 18215316 (Pubitemid 351267364)
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 40
-
-
Zhang, Y.1
-
35
-
-
74249106219
-
I-TASSER: Fully automated protein structure prediction in CASP8
-
(Suppl. 9): 10.1002/prot.22588 19768687
-
Zhang Y. 2009. I-TASSER: Fully automated protein structure prediction in CASP8. Proteins, 77 (Suppl. 9): 100-113. 10.1002/prot.22588 19768687
-
(2009)
Proteins
, vol.77
, pp. 100-113
-
-
Zhang, Y.1
|