Chromosomal markers in Parodontidae: An analysis of new and reviewed data with phylogenetic inferences

Reviews in Fish Biology and Fisheries

Volumn 21, Issue 3, 2011, Pages 559-570

  Bellafronte, Elisangela ^a   Schemberger, Michelle Orane ^b   Moreira Filho, Orlando ^a   Almeida, Mara Cristina ^b   Artoni, Roberto Ferreira ^b   Margarido, Vladimir Pavan ^c   Vicari, Marcelo Ricardo ^b  

^a FEDERAL UNIVERSITY OF SÃO CARLOS   (Brazil)

^b STATE UNIVERSITY OF PONTA GROSSA   (Brazil)

^c UNIVERSIDADE ESTADUAL DO OESTE DO PARANÁ   (Brazil)

Author keywords

Karyotypic diversification; Ribosomal DNA; Satellite DNA; Sex chromosomes

Indexed keywords

BIOMARKER; CHROMOSOME; CLADISTICS; DNA; FISH; GENOME; KARYOTYPE; MOLECULAR ANALYSIS; PHYLOGENETICS; TAXONOMY;

APAREIODON; APAREIODON AFFINIS; NASUS; PARODON; PARODONTINAE;

EID: 79961129057     PISSN: 09603166     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11160-010-9177-3     Document Type: Review

References (54)

1. Artoni RF, Vicari MR, Almeida MC, Moreira-Filho O, Bertollo LAC (2009) Karyotype diversity and fish conservation of southern field from South Brazil. Rev Fish Biol Fish 19: 393-401. doi: 10. 1007/s11160-009-9109-2.
2. Bellafronte E, Margarido VP, Moreira-Filho O (2005) Cytotaxonomy of Parodon tortuosus (Pisces, Characiformes). A case of synonymy confirmed by cytogenetic analyses. Genet Mol Biol 28: 710-716. doi: 10. 1590/S1415-47572005000500011.
3. Bellafronte E, Vicari MR, Artoni RF, Margarido VP, Moreira-Filho O (2009) Differentiated ZZ/ZW sex chromosomes in Apareiodon ibitiensis (Teleostei, Parodontidae): considerations on cytotaxonomy and biogeography. J Fish Biol 75: 2313-2325. doi: 10. 1111/j. 1095-8649. 2009. 02488. x.
4. Bellafronte E, Moreira-Filho O, Vicari MR, Artoni RF, Bertollo LAC, Margarido VP (2010) Cytogenetic identification of invasive fish species following connections between hydrographic basins. Hydrobiologia 649: 347-354. doi: 10. 1007/s10750-010-0277-9.
5. Bertollo LAC, Takahashi CS, Moreira-Filho O (1978) Cytotaxonomic considerations on Hoplias lacerdae (Pisces, Erythrinidae). Brazil J Genet 1: 103-120.
6. Blanco DR, Lui RL, Bertollo LAC, Diniz D, Moreira-Filho O (2010a) Characterization of invasive fish species in a river transposition region: evolutionary chromosome studies in the genus Hoplias (Characiformes, Erythrinidae). Rev Fish Biol Fish 20: 1-8. doi: 10. 1007/s11160-009-9116-3.
7. Blanco DR, Lui RL, Vicari MR, Bertollo LAC, Moreira-Filho O (2010) Comparative cytogenetics of giant trahiras Hoplias aimara and H. intermedius (Characiformes, Erythrinidae): chromosomal characteristics of minor and major ribosomal dna and cross-species repetitive centromeric sequences mapping differ among morphologically identical karyotypes. Cytogenet Genome Res. doi: 10. 1159/000320923.
8. Cabrero J, Bugrov A, Warchałowska-Sliwa E, López-León MD, Perfectti F, Camacho JPM (2003) Comparative FISH analysis in five species of Eyprepocnemidine grasshoppers. Heredity 90: 377-381. doi: 10. 1038/sj. hdy. 6800255.
9. Centofante L, Bertollo LAC, Moreira-Filho O (2002) ZZ/ZW sex chromosome system in new species of the genus Parodon (Pisces, Parodontidae). Caryologia 54: 139-150.
10. Cioffi MB, Martins C, Vicari MR, Rebordinos L, Bertollo LAC (2010) Differentiation of the XY Sex Chromosomes in the Fish Hoplias malabaricus (Characiformes, Erythrinidae): unusual accumulation of repetitive sequences on the X chromosome. Sex Dev 4: 176-185. doi: 10. 1159/000309726.
11. De La Herrán R, Fontana F, Lanfredi M, Congiu L, Leis M, Rossi R, Ruiz Rejón C, Ruiz Rejón M, Garrido-Ramos MA (2001) Slow rates of evolution and sequence homogenization in an ancient satellite DNA family of sturgeons. Mol Biol Evol 18: 432-436.
12. Galetti PM Jr, Cesar ACG, Venere PC (1991) Heterochromatin and NORs variability in Leporinus fish (Anostomidae, Characiformes). Caryologia 44: 287-292.
13. Hatanaka T, Galetti PM Jr (2004) Mapping of the 18S and 5S ribosomal RNA genes in the fish Prochilodus argenteus Agassiz, 1829 (Characiformes, Prochilodontidae). Genetica 122: 239-244. doi: 10. 1007/s10709-004-2039-y.
14. Howell WM, Black DA (1980) Controlled silver-staining of nucleolus organizer regions with a protective colloidal developer: a 1-step method. Experientia 36: 1014-1015.
15. Ingenito LFS (2008) Análise filogenética da família Parodontidae (Teleostei, Characiformes). Ph. D Thesis, Universidade Federal do Rio de Janeiro.
16. Ingenito LFS, Buckup PA (2005) A new species of Parodon from the Serra da Mantiqueira, Brazil (Teleostei: Characiformes: Parodontidae). Copeia 4: 765-771. doi: 10. 1643/0045-8511(2005)005[0765: ANSOPF]2. 0. CO; 2.
17. Jesus CM, Moreira-Filho O (2000a) Cytogenetic studies in some Apareiodon species (Pisces, Parodontidae). Cytologia 65: 397-402.
18. Jesus CM, Moreira-Filho O (2000b) Karyotypes of three species of Parodon (Teleostei: Parodontidae). Ichthyol Explor Freshw 11: 75-80.
19. Jesus CM, Bertollo LAC, Moreira-Filho O (1999) Comparative cytogenetics in Apareiodon affinis (Pisces, Characiformes) and considerations regarding diversification of the group. Genetica 105: 63-67. doi: 10. 1023/A: 1003592022927.
20. Jorge LC, Moreira-Filho O (2000) Cytogenetic studies on Apareiodon affinis (Pisces, Characiformes) from Paraná river basin: sex chromosomes and polymorfism. Genetica 109: 267-273. doi: 10. 1023/A: 1017522914023.
21. Jorge LC, Moreira-Filho O (2004) Nucleolar organizer regions as markers of chromosomal polymorphism in Apareiodon affinis (Pisces, Parodontidae). Caryologia 57: 203-207.
22. Kantek DLZ, Vicari MR, Peres WAM, Cestari MM, Artoni RF, Bertollo LAC, Moreira-Filho O (2009) Chromosomal location and distribution of As51 satellite DNA in five species of the genus Astyanax (Teleostei, Characidae, Incertae sedis). J Fish Biol 75: 408-421. doi: 10. 1111/j. 1095-8649. 2009. 02333. x.
23. Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J (2001) Initial sequencing and analysis of the human genome. Nature 409: 860-921. doi: 10. 1038/35057062.
24. Levan A, Fredga K, Sandberg AA (1964) Nomenclature for centromeric position on chromosomes. Hereditas 52: 201-220.
25. Mantovani M, Abel LDS, Mestriner CA, Moreira-Filho O (2004) Evidence of the differentiated structural arrangement of constitutive heterochromatin between two populations of Astyanax scabripinnis (Pisces, Characidae). Genet Mol Biol 27: 536-542. doi: 10. 1590/S1415-47572004000400012.
26. Martins C, Galetti PM Jr (1999) Chromosomal localization of 5S rDNA genes in Leporinus Fish (Anostomidae, Characiformes). Chromosome Res 7: 363-367. doi: 10. 1023/A: 1009216030316.
27. Moreira-Filho O, Bertollo LAC, Galetti PM Jr (1980) Evindences for a multiple sex chromosome system with female heterogamety in Apareiodon affinis (Pisces, Parodontidae). Caryologia 33: 83-91.
28. Moreira-Filho O, Bertollo LAC, Galetti PM Jr (1984) Structure and variability of nucleolar organizer regions in Parodontidae fish. Can J Genet Cytol 26: 564-568. doi: 10. 1139/g84-089.
29. Moreira-Filho O, Bertollo LAC, Galetti PM Jr (1985) Karyotypic study of some species of family Parodontidae (Pisces-Cypriniformes). Caryologia 38: 47-55.
30. Moreira-Filho O, Bertollo LAC, Galetti PM Jr (1993) Distribution of sex chromosomes mechanisms in Neotropical fish and description of a ZZ/ZW system in Parodon hilarii (Parodontidae). Caryologia 46: 115-125.
31. Orrell TM, Carpenter KE (2004) A phylogeny of the fish family Sparidae (porgies) inferred from mitochondrial sequence data. Mol Phylogenet Evol 32: 425-434. doi: 10. 1016/j. ympev. 2004. 01. 012.
32. Orrell TM, Carpenter KE, Musick JA, Graves JE (2002) A phylogenetic and biogeographic analysis of the Sparidae (Perciformes: Percoidei) based on cytochrome b sequences. Copeia. 618-631. doi: 10. 1643/0045-8511(2002)002[0618: PABAOT]2. 0. CO; 2.
33. Pavanelli CS (2003) Family Parodontidae (Parodonts). In: Reis RE, Kullander SO, Ferraris CJ Jr (eds) Check list of the freshwaters of South and Central América, 1st edn. EDIPUCRS, Porto Alegre, pp 46-50.
34. Pavanelli CS (2006) New species of Apareiodon (Teleostei: Characiformes: Parodontidae) from the Rio Piquiri, Upper Rio Paraná Basin, Brazil. Copeia 1: 89-95. doi: 10. 1643/0045-8511(2006)006[0089: NSOATC]2. 0. CO; 2.
35. Pavanelli CS, Britski HA (2003) Apareiodon Eigenmann, 1916 (Teleostei, Characiformes), from the Tocantins-Araguaia Basin, with description of three new species. Copeia 2: 337-348.
36. Pinkel D, Straume T, Gray JW (1986) Cytogenetic analysis using quantitative, high-sensitivity, fluorescence hybridization. Proc Nat Acad Sci USA 83: 2934-2938.
37. Rosa R, Bellafronte E, Moreira-Filho O, Margarido VP (2006) Constitutive heterochromatin, 5S and 18S rDNA genes in Apareiodon sp. (Characiformes, Parodontidae) with a ZZ/ZW sex chromosome system. Genetica 128: 159-166. doi: 10. 1007/s10709-005-5700-1.
38. Saffery R, Earle E, Irvine DV, Kalitsis P, Choo KH (1999) Conservation of centromere protein in vertebrates. Chromosome Res 7: 261-265. doi: 10. 1023/A: 1009222729850.
39. Saito Y, Edpalina RR, Abe S (2007) Isolation and characterization of salmonid telomeric and centromeric satellite DNA sequences. Genetica 131: 157-166. doi: 10. 1007/s10709-006-9126-1.
40. 3/DA/DAPI staining. Genetica 28: 333-346. doi: 10. 1007/s10709-006-7101-5.
41. Schweizer D, Loid LJ, Hamilton B (1987) Heterochromatin and the phenomenon of chromosome banding. Results Probl Cell Differ 14: 235-254.
42. Slamovits CH, Cook JA, Lessa EP, Rossi MS (2001) Recurrent amplifications and deletions of satellite DNA accompanied chromosomal diversification in South American tucos-tucos (genus Ctenomys, Rodentia: Octodontidae): a phylogenetic approach. Mol Biol Evol 18: 1708-1719.
43. Smith JLB, Smith MM (1986) Family No. 183: Sparidae. In: Smith MM, Heemstra PC (eds) Smith's sea fishes. Macmilliam, South Africa, pp 580-594.
44. Smith SG, Virkki N (1978) Animal cytogenetic. v. 3, Insecta 5. Coleoptera. Gebrüder Borntraeger, Berlin.
45. Sumner AT (1972) A simple technique for demonstrating centromeric heterochromatin. Exp Cell Res 75: 304-306.
46. Taphorn DC, López-Fernández H, Bernard CR (2008) Apareiodon agmatos, a new species from the upper Mazaruni river, Guyana (Teleostei: Characiformes: Parodontidae). Zootaxa 1925: 31-38.
47. Ugarkovic D, Plohl M (2002) Variation in satellite DNA profiles-causes and effects. EMBO J 21: 5955-5959. doi: 10. 1093/emboj/cdf612.
48. Vicari MR, Moreira-Filho O, Artoni RF, Bertollo LAC (2006) ZZ/ZW sex chromosome system in an undescribed species of the genus Apareiodon (Characiformes, Parodontidae). Cytogenet Genome Res 114: 163-168. doi: 10. 1159/000093333.
49. Vicari MR, Artoni RF, Moreira-Filho O, Bertollo LAC (2008) Co-localization of repetitive DNAs and silencing of major rDNA genes. A case report in the fish Astyanax janeiroensis. Cytogenet Genome Res 122: 67-72. doi: 10. 1159/000151318.
50. Vicari MR, Nogaroto V, Noleto RB, Cestari MM, Cioffi MB, Almeida MC, Moreira-Filho O, Bertollo LAC, Artoni RF (2010) Satellite DNA and chromosomes in neotropical fishes: methods, applications and perspectives. J Fish Biol 76: 1094-1116. doi: 10. 1111/j. 1095-8649. 2010. 02564. x.
51. Vicente VE, Jesus CM, Moreira-Filho O (2001) Chromosomal localization of 5S and 18S rDNA genes in three Parodon species (Pisces, Parodontidae). Caryologia 54: 365-369.
52. Vicente VE, Bertollo LAC, Valentini SR, Moreira-Filho O (2003) Origin and differentiation of sex chromosome system in Parodon hilarii (Pisces, Parodontidae). Satellite DNA, G and C-banding. Genetica 119: 115-120. doi: 10. 1023/A: 1026082904672.
53. White MJD (1973) Animal cytology and evolution. Willian Clawes & Sons, London.
54. Wichman HA, Payne CT, Ryder OA, Hamilton MJ, Maltbie M, Baker RJ (1991) Genomic distribution of heterochromatic sequences in equids: implications to rapid chromosomal evolution. J Hered 82: 369-377.