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Volumn 38, Issue 4, 2011, Pages 2739-2750

Molecular analysis of the PGYRP (proline-, glycine-and tyrosinerich protein) gene family in soybean

Author keywords

Abiotic stresses; Glycineand tyrosine rich protein; Proline ; Soybean; XYPPX motif

Indexed keywords

ABSCISIC ACID; COMPLEMENTARY DNA; CYSTEINE; GENOMIC DNA; GLUTAMINE; GLYCINE; PLANT DNA; PROLINE; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 1; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 10; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 11; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 12; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 2; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 3; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 4; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 5; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 6; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 7; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 8; PROLINE GLYCINE AND TYROSINE RICH PROTEIN 9; TYROSINE; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; PRIMER DNA;

EID: 79960936205     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-010-0419-1     Document Type: Article
Times cited : (7)

References (39)
  • 2
    • 0027140360 scopus 로고
    • Molecular response to water deficit
    • Bray EA (1993) Molecular response to water deficit. Plant Physiol 103:1035-1040
    • (1993) Plant Physiol , vol.103 , pp. 1035-1040
    • Bray, E.A.1
  • 3
    • 0036593214 scopus 로고    scopus 로고
    • Classification of genes differentially expressed during water deficit stress in Arabidopsis thaliana: An analysis using microarray and differential expression data
    • Bray EA (2002) Classification of genes differentially expressed during water deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expression data. Ann Bot 89:803-811
    • (2002) Ann Bot , vol.89 , pp. 803-811
    • Bray, E.A.1
  • 4
    • 13744261322 scopus 로고    scopus 로고
    • Organization of cis-acting regulatory elements in osmotic-and cold-stress responsive promoters
    • Yamaguchi-Shinozaki K, Shinozaki K (2005) Organization of cis-acting regulatory elements in osmotic-and cold-stress responsive promoters. Trends Plant Sci 10:88-94
    • (2005) Trends Plant Sci , vol.10 , pp. 88-94
    • Yamaguchi-Shinozaki, K.1    Shinozaki, K.2
  • 5
    • 0033568582 scopus 로고    scopus 로고
    • Disruption and functional analysis of seven ORFs on chromosome IV: YDL057w, YDL012c, YDL010w, YDL009c, YDL008w (APC11) YDL005c (MED2) and YDL003w (MCD1)
    • Smith KN, Iwanejko L, Loeillet S, Fabre F, Nicolas A (1999) Disruption and functional analysis of seven ORFs on chromosome IV: YDL057w, YDL012c, YDL010w, YDL009c, YDL008w (APC11), YDL005c (MED2) and YDL003w (MCD1). Yeast 15:1255-1267
    • (1999) Yeast , vol.15 , pp. 1255-1267
    • Smith, K.N.1    Iwanejko, L.2    Loeillet, S.3    Fabre, F.4    Nicolas, A.5
  • 6
    • 0034176386 scopus 로고    scopus 로고
    • Differential expression of genes encoding cell wall proteins in vascular tissues from vertical and bent loblolly pine trees
    • Zhang Y, Sederoff RR, Allona I (2000) Differential expression of genes encoding cell wall proteins in vascular tissues from vertical and bent loblolly pine trees. Tree Physiol 20:457-466
    • (2000) Tree Physiol , vol.20 , pp. 457-466
    • Zhang, Y.1    Sederoff, R.R.2    Allona, I.3
  • 7
    • 3142666176 scopus 로고    scopus 로고
    • A novel Chlamydomonas reinhardtii gene potentially encoding a proline-, glycine-, and tyrosine-rich protein (PGYRP)
    • Sangiorgio L, Strumbo B, Tenchini ML, Malcovati M, Ronchi S, Simonic T (2004) A novel Chlamydomonas reinhardtii gene potentially encoding a proline-, glycine-, and tyrosine-rich protein (PGYRP). Plant Sci 167:519-526
    • (2004) Plant Sci , vol.167 , pp. 519-526
    • Sangiorgio, L.1    Strumbo, B.2    Tenchini, M.L.3    Malcovati, M.4    Ronchi, S.5    Simonic, T.6
  • 9
    • 67349242955 scopus 로고    scopus 로고
    • Expression of a novel OsPGYRP (rice proline-, glycine-and tyrosine-rich protein) gene, which is involved in vesicle trafficking, enhanced cold tolerance in E. coli
    • Li H, Yang J, Wang YY, Chen ZJ, Tu SS, Feng LL et al (2009) Expression of a novel OsPGYRP (rice proline-, glycine-and tyrosine-rich protein) gene, which is involved in vesicle trafficking, enhanced cold tolerance in E. coli. Biotechnol Lett 31:905-910
    • (2009) Biotechnol Lett , vol.31 , pp. 905-910
    • Li, H.1    Yang, J.2    Wang, Y.Y.3    Chen, Z.J.4    Tu, S.S.5    Feng, L.L.6
  • 10
    • 77950462426 scopus 로고    scopus 로고
    • CYSTM, a novel cysteine-rich transmembrane module with a role in stress tolerance across eukaryotes
    • Venancio TM, Aravind L (2010) CYSTM, a novel cysteine-rich transmembrane module with a role in stress tolerance across eukaryotes. Bioinformatics 26:149-152
    • (2010) Bioinformatics , vol.26 , pp. 149-152
    • Venancio, T.M.1    Aravind, L.2
  • 11
    • 0025270075 scopus 로고
    • Novel secondary structures proposed for the tandem repeats within rhodopsin, synaptophysin, synexin, gliadin, RNA polymerase II, hordein, and gluten
    • Matsushima N, Creutz CE, Kretsinger RH (1990) Novel secondary structures proposed for the tandem repeats within rhodopsin, synaptophysin, synexin, gliadin, RNA polymerase II, hordein, and gluten. Proteins 7:125-155
    • (1990) Proteins , vol.7 , pp. 125-155
    • Matsushima, N.1    Creutz, C.E.2    Kretsinger, R.H.3
  • 12
    • 0030087962 scopus 로고    scopus 로고
    • Molecular characterization of the gene coding for GPRP, a class of proteins rich in glycine and proline interacting with membranes in Arabidopsis thaliana
    • Marty I, Monfort A, Stiefel V, Ludevid D, Delseny M, Puigdomé nech P (1996) Molecular characterization of the gene coding for GPRP, a class of proteins rich in glycine and proline interacting with membranes in Arabidopsis thaliana. Plant Mol Biol 30:625-636
    • (1996) Plant Mol Biol , vol.30 , pp. 625-636
    • Marty, I.1    Monfort, A.2    Stiefel, V.3    Ludevid, D.4    Puigdoménech, P.5
  • 13
    • 0036083696 scopus 로고    scopus 로고
    • Annexins: From structure to function
    • Gerke V, Moss SE (2002) Annexins: from structure to function. Physiol Rev 82:331-371
    • (2002) Physiol Rev , vol.82 , pp. 331-371
    • Gerke, V.1    Moss, S.E.2
  • 14
    • 0023661124 scopus 로고
    • A synaptic vesicle protein with a novel cytoplasmic domain and four transmembrane regions
    • Süldhof TC, Lottspeich F, Greengard P, Mehl E, Jahn R (1987) A synaptic vesicle protein with a novel cytoplasmic domain and four transmembrane regions. Science 238:1142-1144
    • (1987) Science , vol.238 , pp. 1142-1144
    • Süldhof, T.C.1    Lottspeich, F.2    Greengard, P.3    Mehl, E.4    Jahn, R.5
  • 15
    • 1442291028 scopus 로고    scopus 로고
    • PCC1: A merging point forthe pathogen defence and circadian signalling in Arabidopsis
    • Sauerbrunn N, Schlaich NL (2004) PCC1: a merging point forthe pathogen defence and circadian signalling in Arabidopsis. Planta 218:552-561
    • (2004) Planta , vol.218 , pp. 552-561
    • Sauerbrunn, N.1    Schlaich, N.L.2
  • 16
    • 72049088262 scopus 로고    scopus 로고
    • Genome-wide analyses of the transcriptomes of salicylic acid-deficient versus wild-type plants uncover Pathogen and Circadian Controlled 1 (PCC1) as a regulator of flowering time in Arabidopsis
    • Segarra S, Mir R, Martníez C, León J (2010) Genome-wide analyses of the transcriptomes of salicylic acid-deficient versus wild-type plants uncover Pathogen and Circadian Controlled 1 (PCC1) as a regulator of flowering time in Arabidopsis. Plant Cell Environ 33:11-22
    • (2010) Plant Cell Environ , vol.33 , pp. 11-22
    • Segarra, S.1    Mir, R.2    Martníez, C.3    León, J.4
  • 17
    • 53349089551 scopus 로고    scopus 로고
    • Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana
    • doi:10.1186/1471-2229
    • Krishnaswamy SS, Srivastava S, Mohammadi M, Rahman MH, Deyholos MK, Kav NN (2008) Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana. BMC Plant Biol 8:91. doi:10.1186/1471-2229- 8-91
    • (2008) BMC Plant Biol , vol.8 , Issue.91 , pp. 8-91
    • Krishnaswamy, S.S.1    Srivastava, S.2    Mohammadi, M.3    Rahman, M.H.4    Deyholos, M.K.5    Kav, N.N.6
  • 18
    • 49449084059 scopus 로고    scopus 로고
    • Microarray expression profiling of Arabidopsis thaliana L. in response to allelochemicals identified in buckwheat
    • Golisz A, Sugano M, Fujii Y (2008) Microarray expression profiling of Arabidopsis thaliana L. in response to allelochemicals identified in buckwheat. J Exp Bot 59:3099-3109
    • (2008) J Exp Bot , vol.59 , pp. 3099-3109
    • Golisz, A.1    Sugano, M.2    Fujii, Y.3
  • 19
    • 0036909761 scopus 로고    scopus 로고
    • Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress
    • Kreps JA, Wu YJ, Chang HS, Zhu T, Wang X, Harper JF (2002) Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. Plant Physiol 130:2129-2141
    • (2002) Plant Physiol , vol.130 , pp. 2129-2141
    • Kreps, J.A.1    Wu, Y.J.2    Chang, H.S.3    Zhu, T.4    Wang, X.5    Harper, J.F.6
  • 20
    • 33745780270 scopus 로고    scopus 로고
    • The Arabidopsis root hair cell wall formation mutant lrx1 is suppressed by mutations in the RHM1 gene encoding a UDP-L-rhamnose synthase
    • Diet A, Link B, Seifert GJ, Schellenberg B, Wagner U, Pauly M, Reiter W, Ringlia C (2006) The Arabidopsis root hair cell wall formation mutant lrx1 is suppressed by mutations in the RHM1 gene encoding a UDP-L-rhamnose synthase. Plant Cell 18:1630-1641
    • (2006) Plant Cell , vol.18 , pp. 1630-1641
    • Diet, A.1    Link, B.2    Seifert, G.J.3    Schellenberg, B.4    Wagner, U.5    Pauly, M.6    Reiter, W.7    Ringlia, C.8
  • 21
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 22
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 23
    • 0032918558 scopus 로고    scopus 로고
    • Plant cisacting regulatory DNA elements (PLACE) database
    • Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cisacting regulatory DNA elements (PLACE) database. Nucleic Acids Res 27:297-300
    • (1999) Nucleic Acids Res , vol.27 , pp. 297-300
    • Higo, K.1    Ugawa, Y.2    Iwamoto, M.3    Korenaga, T.4
  • 24
    • 0034914973 scopus 로고    scopus 로고
    • Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression
    • Yu DQ, Chen CH, Chen ZX (2001) Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell 13:1527-1540
    • (2001) Plant Cell , vol.13 , pp. 1527-1540
    • Yu, D.Q.1    Chen, C.H.2    Chen, Z.X.3
  • 25
    • 4444225070 scopus 로고    scopus 로고
    • Pathogen-and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor
    • Park HC, Kim ML, Kang YH, Jeon JM, Yoo JH, Kim MC et al (2004) Pathogen-and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor. Plant Physiol 135:2150-2161
    • (2004) Plant Physiol , vol.135 , pp. 2150-2161
    • Park, H.C.1    Kim, M.L.2    Kang, Y.H.3    Jeon, J.M.4    Yoo, J.H.5    Kim, M.C.6
  • 26
    • 7344261272 scopus 로고    scopus 로고
    • Identification of promoter elements in a low-temperature-responsive gene (blt4.9) from barley (Hordeum vulgare L.)
    • Dunn MA, White AJ, Vural S, Hughes MA (1998) Identification of promoter elements in a low-temperature-responsive gene (blt4.9) from barley (Hordeum vulgare L.). Plant Mol Biol 38:551-564
    • (1998) Plant Mol Biol , vol.38 , pp. 551-564
    • Dunn, M.A.1    White, A.J.2    Vural, S.3    Hughes, M.A.4
  • 27
    • 0029853904 scopus 로고    scopus 로고
    • Interaction of elicitor-induced DNA-binding proteins with elicitor response elements in the promoters of parsley PR1 genes
    • Rushton PJ, Torres JT, Parniske M, Wernert P, Hahlbrock K, Somssich IE (1996) Interaction of elicitor-induced DNA-binding proteins with elicitor response elements in the promoters of parsley PR1 genes. EMBO J 15:5690-5700
    • (1996) EMBO J , vol.15 , pp. 5690-5700
    • Rushton, P.J.1    Torres, J.T.2    Parniske, M.3    Wernert, P.4    Hahlbrock, K.5    Somssich, I.E.6
  • 29
    • 0038468557 scopus 로고    scopus 로고
    • Two cis-acting elements necessary and sufficient for gibberellin- upregulated proteinase expression in rice seeds
    • Sutoh K, Yamauchi D (2003) Two cis-acting elements necessary and sufficient for gibberellin-upregulated proteinase expression in rice seeds. Plant J 34:636-645
    • (2003) Plant J , vol.34 , pp. 636-645
    • Sutoh, K.1    Yamauchi, D.2
  • 30
    • 0032210884 scopus 로고    scopus 로고
    • Identification of tomato Lhc promoter regions necessary for circadian expression
    • Piechulla B, Merforth N, Rudolph B (1998) Identification of tomato Lhc promoter regions necessary for circadian expression. Plant Mol Biol 38:655-662
    • (1998) Plant Mol Biol , vol.38 , pp. 655-662
    • Piechulla, B.1    Merforth, N.2    Rudolph, B.3
  • 31
    • 0030875859 scopus 로고    scopus 로고
    • Calcium-dependent binding of sorcin to the N-terminal domain of synexin (Annexin VII)
    • Brownawell AM, Creutz CE (1997) Calcium-dependent binding of sorcin to the N-terminal domain of synexin (Annexin VII). J Biol Chem 272:22182-22190
    • (1997) J Biol Chem , vol.272 , pp. 22182-22190
    • Brownawell, A.M.1    Creutz, C.E.2
  • 32
    • 0034646817 scopus 로고    scopus 로고
    • The sorcin-annexin VII calcium-dependent interaction requires the sorcin N-terminal domain
    • Verzili D, Zamparelli C, Mattei B, Noegel AA, Chiancone E (2000) The sorcin-annexin VII calcium-dependent interaction requires the sorcin N-terminal domain. FEBS Lett 471:197-200
    • (2000) FEBS Lett , vol.471 , pp. 197-200
    • Verzili, D.1    Zamparelli, C.2    Mattei, B.3    Noegel, A.A.4    Chiancone, E.5
  • 34
    • 34248531753 scopus 로고    scopus 로고
    • Locating proteins in the cell using TargetP, SignalP and related tools
    • Emanuelsson O, Brunak S, Heijne G, Nielsen H (2007) Locating proteins in the cell using TargetP, SignalP and related tools. Nat Protoc 2:953-971
    • (2007) Nat Protoc , vol.2 , pp. 953-971
    • Emanuelsson, O.1    Brunak, S.2    Heijne, G.3    Nielsen, H.4
  • 35
    • 14744272294 scopus 로고    scopus 로고
    • Rhodopsin C terminus, the site of mutations causing retinal disease, regulates trafficking by binding to ADPribosylation factor 4 (ARF4)
    • Deretic D, Williams AH, Ransom N, Morel V, Hargrave PA, Arendt A (2005) Rhodopsin C terminus, the site of mutations causing retinal disease, regulates trafficking by binding to ADPribosylation factor 4 (ARF4). Proc Natl Acad Sci USA 102:3301-3306
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 3301-3306
    • Deretic, D.1    Williams, A.H.2    Ransom, N.3    Morel, V.4    Hargrave, P.A.5    Arendt, A.6
  • 36
    • 33750607737 scopus 로고    scopus 로고
    • A role for rhodopsin in a signal transduction cascade that regulates membrane trafficking and photoreceptor polarity
    • Deretic D (2006) A role for rhodopsin in a signal transduction cascade that regulates membrane trafficking and photoreceptor polarity. Vision Res 46:4427-4433
    • (2006) Vision Res , vol.46 , pp. 4427-4433
    • Deretic, D.1
  • 38
    • 0028837102 scopus 로고
    • Expression and regulation of aERD2, a gene encoding the KDEL receptor homolog in plants, and other genes encoding proteins involved in ER-Golgi vesicular trafficking
    • Bar-Peled M, Da Silva Conceicao A, Frigerio L, Raikhel NV (1995) Expression and regulation of aERD2, a gene encoding the KDEL receptor homolog in plants, and other genes encoding proteins involved in ER-Golgi vesicular trafficking. Plant Cell 7:667-676
    • (1995) Plant Cell , vol.7 , pp. 667-676
    • Bar-Peled, M.1    Da Silva Conceicao, A.2    Frigerio, L.3    Raikhel, N.V.4
  • 39
    • 0028898087 scopus 로고
    • Characterization of uvi15? , a stress-inducible gene from Schizosaccharomyces pombe
    • Lee JK, Kim M, Choe J, Seong RH, Hong SH, Park SD (1995) Characterization of uvi15? , a stress-inducible gene from Schizosaccharomyces pombe. Mol Gen Genet 246:663-670
    • (1995) Mol Gen Genet , vol.246 , pp. 663-670
    • Lee, J.K.1    Kim, M.2    Choe, J.3    Seong, R.H.4    Hong, S.H.5    Park, S.D.6


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