Characterization and estimation of genetic diversity in citrus rootstocks

International Journal of Agriculture and Biology

Volumn 13, Issue 4, 2011, Pages 571-575

  El Mouei, Rima ^a   Choumane, Wafaa ^a   Dway, Fayssal ^a  

^a TISHREEN UNIVERSITY   (Syrian Arab Republic)

Author keywords

Citrus rootstock; Genetic diversity; Molecular markers; Syria

Indexed keywords

CITRUS; CITRUS AURANTIUM; CLEOPATRA MANDARIN;

EID: 79960607594     PISSN: 15608530     EISSN: 18149596     Source Type: Journal    
DOI: None     Document Type: Article

References (42)

1. Abkenar, A. and S. Isshiki, 2003. Molecular characterization and genetic diversity among Japanese acid citrus (Citrus spp.) based on RAPD markers. J. Hortic. Sci. Biotechnol., 78: 108-112
2. Barrett, H.C. and A.M. Rhodes, 1976. A numerical taxonomic study of affinity relationships in cultivated Citrus and its close relatives. System Bot., 1: 105-136
3. Barkley, N.A., M.L. Roose, R.R. Krueger and C.T. Federici, 2006. Assessing genetic diversity and population structure in a Citrus germplasm collection utilizing simple sequence repeat markers (SSRs). Theor. Appl. Genet., 112: 1519-1531
4. Bassam, B.J. and G. Caetano-Anollés, 1993. Silver staining of DNA in polyacrylamide gels. Appl. Biochem. Biotechnol., 42: 181-188
5. Bastianel, M., S.F. Schwarz, H.D. Coletta Filho, L.L. Lee, M.A. Machado and O.C. Koller, 1998. Identification of zygotic and nucellar tangerine seedlings (Citrus spp.) using RAPD. Genet. Mol. Biol., 21: 123-127
6. Cabrita, L., P. Elisiario, J. Leitao and A. Guerrerio, 2001. Assesment of the genetic relationships among citrus species and varieties by isozime and RAPD markers. Acta Hortic., 546: 177-181
7. Cameron, J.W., 1979. Sexual and nucellar embriony in F1 hybrids and advanced crosses of Citrus and Pncirus. J. American Soc. Hortic. Sci., 104: 408-410
8. Coletta Filho, H.D., M.A. Machado, M.L. P.N. Targon, M.C.P.Q.D.G. Moreira and J.R. Pompeu, 1998. Analysis of the genetic diversity among mandarins (Citrus spp.) using RAPD markers. Euphytica, 102: 133-139
9. Coletta Filho, H.D., M.A. Machado, M.L. P.N. Targon and J. Pompeu, 2000.The use of random amplified polymorphic DNA to evaluate the genetic variability of Ponkan mandarine (Citrus reticulate Blanco) accessions. Genet. Mol. Biol., 23: 169-172
10. Corazza, M.J., M.A. Machado, W.M.C. Nunes, M. Cristofani and M.L.P.N. Targon, 2002. Assesment of genetic variability in grapefruits (Citrus paradisi) and pummelos (C. maxima) using RAPD and SSR markers. Euphytica, 126: 169-176
11. th Int. Society of Citriculture Congress, Orlando, Florida, pp: 175-180
12. Das, A., B. Mondal, J. Sarkar and S. Chaudhuri, 2004. Genetic diversity analysis of Citrus cultivars and rootstocks of the north eastern India by RAPD markers. J. Hortic. Sci. Biotechnol., 79: 850-854
13. Deng, Z.N., A. Genttile, E. Nicolosi, G. Cotinella and E. Tribulato, 1996. Parentage determination of some Citrus hybrids by molecular markers. Prc. Int. Soc. Citricul., 2: 849-854
14. De Pasquale, F., M. Siragusa, L. Abbate, N. Tusa, C. De Pasquale and G. Alonzo, 2006. Characterization of five sour orange clones through molecular markers and leaf essential oils analysis. Scientia Hortic., 109: 54-59
15. Fang, D.Q. and M.L. Roose, 1997. Identification of closely related Citrus cultivars with inter-simple sequence repeat markers. Thero. Appl. Genet., 95: 408-417
16. Fang, D.Q., R.R. Krueger and M.L. Roose, 1998. Phylogenetic relationships among selected Citrus germplasm accessions revealed by intersimple sequence repeat (ISSR) markers. J.A. Soc. Hort. Sci.,123: 612-617
17. Frost, H.B., 1943. Genetic and breeding. In: Webber, H.J. and and L.D. Batchelor (eds.), The Citrus Industry, Vol. 1, pp: 817-913. University of California Press, Berkely
18. Federici, C.T., D.Q. Fang, R.W. Scora and M.L. Roose, 1998. Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis. Thero. Appl. Genet., 94: 812-822
19. Golein, B., A. Talaie, Z. Zamani and B. Moradi, 2006. Development and characterization of new microsatellite loci from Lemon (Citrus lemon). Int. J. Agric. Biol., 8: 172-174
20. Hvarleva, T., T. Kapari-Isaia, L. Papayiannis, A. Atanassov, A. Hadjinicoli and A. Kyriakou, 2008. Characterization of Citrus Cultivars and Clones in Cyprus through Microsatellite and RAPD Analysis. Biotechnol. Biotechnol. Eq., 22: 787-794
21. Herrero, R., M.J. Asins, E.A. Carbonell and L. Navarro, 1996. Genetic diversity in the orange subfamily Aurantioideae. Intraspecies and intragenus genetic variability. Thero. Appl. Genet., 92: 599-609
22. Hussein, E., S. Abd-Allaa, A. Awad and M. Hussein, 2003. Genetic analysis in some Citrus accessions using microsatellite and AFLP based markers. Arab J. Biotech., 2: 202-223
23. Kijas, J.M., M.R. Thomas, J.C. Fowler and M.L. Roose, 1997. Integration of trinucleotide microsatellite into a linkage map of Citrus. Thero. Appl. Genet., 94: 701-706
24. Koehler-Santos, P., A.L. Dornelles and L.B. Freitas, 2003. Characterization of mandarin Citrus germplasm from southern Brazil by morphological and molecular analyses. Pesq. Agropec. Brasileira, 38: 797-806
25. Li, Y.Z., Y.J. Cheng, H.L. Yi and X.X. Deng, 2006. Genetic diversity in mandarin landraces and wild mandarins from China based on nuclear and chloroplast simple sequence repeat markers. J. Hort. Sci. Biotechnol., 81: 371-378
26. Luro, F., F. Laigret and J.M. Bové, 1992. Application of Random Amplified Polymorphic DNA (RAPD) to Citrus Genetic and Taxonomy, Vol. 1, pp: 225-228. In: International Citrus congress, 7, Italy, 1992; Proceedings Italy: International Society of Citriculture
27. Luro, F., F. Laigret, J.M. Bove and P. Ollitrault, 1995. RFLP Analysis of Cytoplasmic and Genmes used for Citrus Taxonomy. Symposium mediterraeen sur mandaries, 5-11 mars 1995, Corse, France
28. Ming, F., Q.K. Liu, J.L. Shi, W. Wang and B.R. Lu, 2009. Strategic conservation of orchard germplasm based on indigenous knowledge and genetic diversity: a case study of Sour orange populations in China. J. Integr. Plant Biol., 51: 100-106
29. Nei, M. and W. Li, 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA, 76: 5269-5273
30. Nei, M., 1987. Molecular Evolutionary Genetics. New York: Columbia University Press
31. Nicolosi, E., Z.N. Deng, A. Gentile, S.L. Malfa, G. Continella and E. Tribulato, 2000. Citrus phylogeny and genetic origin of important species as investigated by molecular markers. Thero. Appl. Genet., 100: 1155-1166
32. Novelli, V.M., M. Cristofani and M.A. Machado, 2000. Evaluation of microsatellite markers in cultivars of sweet orange (Citrus sinensis [L.] osbeck). Acta Hortic., 535: 47-50
33. Oliveira, A.C., A.N. Garcia, M. Cristofani and M.A. Machado, 2002. Identification of Citrus hybrids the combination of leaf apex morphology and SSR markers. Euphytica., 128: 379-403
34. Pang, X.M., C.G. Hu and X.X. Deng, 2003. Phylogenetic relationships among Citrus and its relatives as revealed by SSR markers. Acta. Genet. Sin., 30: 81-87
35. Rohlf, F.J., 1993. NTSYS-PC Numerical Taxonomy and Multivariate Analysis System Version 1-80. Exeter Software, Setauket, New York
36. Ruiz, C., M.P. Bretó and M.J. Asins, 2000. A quick methodology to identify sexual seedlings in Citrus breeding programs using SSR markers. Euphytica., 112: 89-94
37. Scora, R.W., 1975. On the History and Origin of Citrus, Vol. 102, pp: 369-375. Source: Bulletin of the Torrey Botanical Club. Published by: Torrey Botanical Society Stable. URL: http://www.jstor.org/stable/2484763 Accessed: 23/07/2010 19:33
38. Schäfer, G., M. Bastianel and A.L.C. Dornelles, 2004. Genetic diversity of Citrus rootstocks based on RAPD marker analysis. Ciencia Rural., 34: 1437-1442
39. Siragusa, M., F. Pasquale, L. Abbate and N. Tusa, 2006. Identification of sour orange accessions and evaluation of their genetic variability by molecular marker analysis. Hortic. Sci., 41: 84-89
40. Sneath, P.H.A. and R.R. Sokal, 1973. Numerical Taxonomy. Freeman, San Francisco, California
41. Weir, B.S., 1990. Genetic Data Analysis: Methods for Discrete Population Genetic Data, p: 445. Sunderland, Massachusetts: Sinauer Assosiates
42. Zerihun, D., U. Vashist and K.S. Boora, 2009. Molecular characterization of Citrus cultivars using DNA markers. Int. J. Biotechnol. Biochem., September 1, 2009. http://www.thefreelibrary.com