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Volumn 12, Issue 4, 2011, Pages 981-989

Population genetic structure and conservation genetics of threatened Okaloosa darters (Etheostoma okaloosae)

Author keywords

AMOVA; Bayesian cluster analysis; Distinct population segments; Endangered; Evolutionary significant units; Phylogeography

Indexed keywords

ANTHROPOGENIC EFFECT; BAYESIAN ANALYSIS; CLUSTER ANALYSIS; CONSERVATION GENETICS; ENDANGERED SPECIES; GENETIC ANALYSIS; GENETIC MARKER; GENETIC STRUCTURE; HABITAT CONSERVATION; ISOLATED POPULATION; MITOCHONDRIAL DNA; PERCID; PHYLOGEOGRAPHY; POPULATION SIZE; STREAMFLOW;

EID: 79960589934     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-011-0201-5     Document Type: Article
Times cited : (26)

References (45)
  • 1
    • 79960601474 scopus 로고    scopus 로고
    • The utility of morphological data in resolving phylogenetic relationships of darters as exemplified with Etheostoma (Teleostei: Percidae)
    • Ayache NC, Near TJ (2009) The utility of morphological data in resolving phylogenetic relationships of darters as exemplified with Etheostoma (Teleostei: Percidae). Bull Peabody Mus Nat Hist 50: 327-346.
    • (2009) Bull Peabody Mus Nat Hist , vol.50 , pp. 327-346
    • Ayache, N.C.1    Near, T.J.2
  • 2
    • 34447116390 scopus 로고    scopus 로고
    • Characterization of eight polymorphic microsatellite DNA markers for the greenside darter, Etheostomablennioides (Percidae)
    • Beneteau CL, Mandrak NE, Heath DD (2007) Characterization of eight polymorphic microsatellite DNA markers for the greenside darter, Etheostomablennioides (Percidae). Mol Ecol Notes 7: 641-643.
    • (2007) Mol Ecol Notes , vol.7 , pp. 641-643
    • Beneteau, C.L.1    Mandrak, N.E.2    Heath, D.D.3
  • 4
    • 0034978629 scopus 로고    scopus 로고
    • Landscape structure and hierarchical genetic diversity in the brook charr, Salvelinus fontinalis
    • Castric V, Bonney F, Bernatchez L (2001) Landscape structure and hierarchical genetic diversity in the brook charr, Salvelinus fontinalis. Evolution 55: 1016-1028.
    • (2001) Evolution , vol.55 , pp. 1016-1028
    • Castric, V.1    Bonney, F.2    Bernatchez, L.3
  • 5
    • 58149391651 scopus 로고    scopus 로고
    • Effects of fin clipping on survival and position-holding behavior of brown darters, Etheostoma edwini
    • Champagne CE, Austin JD, Jelks HL, Jordan F (2008) Effects of fin clipping on survival and position-holding behavior of brown darters, Etheostoma edwini. Copeia 2008: 917-920.
    • (2008) Copeia , vol.2008 , pp. 917-920
    • Champagne, C.E.1    Austin, J.D.2    Jelks, H.L.3    Jordan, F.4
  • 6
    • 0027305597 scopus 로고
    • The effect of deleterious mutations on neutral molecular variation
    • Charlesworth B, Morgan MT, Charlesworth D (1993) The effect of deleterious mutations on neutral molecular variation. Genetics 134: 1289-1303.
    • (1993) Genetics , vol.134 , pp. 1289-1303
    • Charlesworth, B.1    Morgan, M.T.2    Charlesworth, D.3
  • 7
    • 34547883224 scopus 로고    scopus 로고
    • Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study
    • Chen C, Durand E, Forbes F, François O (2007) Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study. Mol Ecol Notes 7: 747-756.
    • (2007) Mol Ecol Notes , vol.7 , pp. 747-756
    • Chen, C.1    Durand, E.2    Forbes, F.3    François, O.4
  • 8
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gene genealogies
    • Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Mol Ecol 9: 1657-1660.
    • (2000) Mol Ecol , vol.9 , pp. 1657-1660
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 9
    • 41149154942 scopus 로고    scopus 로고
    • Congruent population structure inferred from dispersal behaviour and intensive genetic surveys of the threatened Florida Scrub-Jay (Aphelocoma cœrulescens)
    • Coulon A, Fitzpatrick JW, Bowman R, Stith BM, Makarewich CA, Stenzler LM, Lovette IJ (2008) Congruent population structure inferred from dispersal behaviour and intensive genetic surveys of the threatened Florida Scrub-Jay (Aphelocoma cœrulescens). Mol Ecol 17: 1685-1701.
    • (2008) Mol Ecol , vol.17 , pp. 1685-1701
    • Coulon, A.1    Fitzpatrick, J.W.2    Bowman, R.3    Stith, B.M.4    Makarewich, C.A.5    Stenzler, L.M.6    Lovette, I.J.7
  • 10
    • 12044258905 scopus 로고
    • Intraspecific cladogram estimation: accuracy at higher levels of divergence
    • Crandall KA (1994) Intraspecific cladogram estimation: accuracy at higher levels of divergence. Syst Biol 43: 222-235.
    • (1994) Syst Biol , vol.43 , pp. 222-235
    • Crandall, K.A.1
  • 12
    • 4344568438 scopus 로고    scopus 로고
    • The expansion of conservation genetics
    • DeSalle R, Amato G (2004) The expansion of conservation genetics. Nat Rev Genet 5: 702-712.
    • (2004) Nat Rev Genet , vol.5 , pp. 702-712
    • Desalle, R.1    Amato, G.2
  • 13
    • 0034604454 scopus 로고    scopus 로고
    • Parentage and nest guarding in the tessellated darter (Etheostoma olmstedi) assayed by microsatellite markers (Perciformes: Percidae)
    • DeWoody JA, Fletcher DE, Wilkins SD, Avise JC (2000) Parentage and nest guarding in the tessellated darter (Etheostoma olmstedi) assayed by microsatellite markers (Perciformes: Percidae). Copeia 2000: 740-747.
    • (2000) Copeia , vol.2000 , pp. 740-747
    • Dewoody, J.A.1    Fletcher, D.E.2    Wilkins, S.D.3    Avise, J.C.4
  • 14
    • 43749096109 scopus 로고    scopus 로고
    • Modeling unobserved sources of heterogeneity in animal abundance using a Dirichlet process prior
    • Dorazio RM, Mukherjee B, Zhang L, Ghosh M, Jelks HL, Jordan F (2008) Modeling unobserved sources of heterogeneity in animal abundance using a Dirichlet process prior. Biometrics 64: 635-644.
    • (2008) Biometrics , vol.64 , pp. 635-644
    • Dorazio, R.M.1    Mukherjee, B.2    Zhang, L.3    Ghosh, M.4    Jelks, H.L.5    Jordan, F.6
  • 15
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 16
    • 0015310384 scopus 로고
    • The sampling theory of selectively neutral alleles
    • Ewens WJ (1972) The sampling theory of selectively neutral alleles. Theor Popul Biol 3: 87-112.
    • (1972) Theor Popul Biol , vol.3 , pp. 87-112
    • Ewens, W.J.1
  • 17
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin (version 3.0): an integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S (2005) Arlequin (version 3. 0): an integrated software package for population genetics data analysis. Evol Bioinform Online 1: 147-150.
    • (2005) Evol Bioinform Online , vol.1 , pp. 147-150
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 18
    • 0035544509 scopus 로고    scopus 로고
    • Adaptive evolutionary conservation: towards a unified concept for defining conservation units
    • Fraser DJ, Bernatchez L (2001) Adaptive evolutionary conservation: towards a unified concept for defining conservation units. Mol Ecol 10: 2741-2752.
    • (2001) Mol Ecol , vol.10 , pp. 2741-2752
    • Fraser, D.J.1    Bernatchez, L.2
  • 19
    • 36849066957 scopus 로고    scopus 로고
    • Isolation and identification of eight microsatellite loci in the Cherokee darter (Etheostoma scotti) and their variability in other members of the genera Etheostoma, Ammocrypta, and Percina
    • Gabel JM, Dakin EE, Freeman BJ, Porter BA (2008) Isolation and identification of eight microsatellite loci in the Cherokee darter (Etheostoma scotti) and their variability in other members of the genera Etheostoma, Ammocrypta, and Percina. Mol Ecol Resour 8: 149-151.
    • (2008) Mol Ecol Resour , vol.8 , pp. 149-151
    • Gabel, J.M.1    Dakin, E.E.2    Freeman, B.J.3    Porter, B.A.4
  • 20
    • 38949185509 scopus 로고    scopus 로고
    • Genetic structure in heterogenous environments
    • R. Ferrière, U. Dieckmann, and D. Couvet (Eds.), Cambridge, UK: Cambridge University Press
    • Gaggiotti O, Couvet D (2004) Genetic structure in heterogenous environments. In: Ferrière R, Dieckmann U, Couvet D (eds) Evolutionary conservation biology. Cambridge studies in adaptive dynamics. Cambridge University Press, Cambridge, UK, pp 229-243.
    • (2004) Evolutionary Conservation Biology. Cambridge Studies in Adaptive Dynamics , pp. 229-243
    • Gaggiotti, O.1    Couvet, D.2
  • 21
    • 34547861256 scopus 로고    scopus 로고
    • CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodalityin analyses of population structure
    • Jakobsson M, Rosenberg NA (2007) CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodalityin analyses of population structure. Bioinformatics 23: 1801-1806.
    • (2007) Bioinformatics , vol.23 , pp. 1801-1806
    • Jakobsson, M.1    Rosenberg, N.A.2
  • 23
    • 38349118071 scopus 로고    scopus 로고
    • Comparison of visual survey and seining methods for a benthic stream fish
    • Jordan F, Jelks HL, Bortone S, Dorazio RM (2008) Comparison of visual survey and seining methods for a benthic stream fish. Environ Biol Fish 81: 313-319.
    • (2008) Environ Biol Fish , vol.81 , pp. 313-319
    • Jordan, F.1    Jelks, H.L.2    Bortone, S.3    Dorazio, R.M.4
  • 24
    • 34247556409 scopus 로고    scopus 로고
    • Systematics of the subgenus Oligocephalus (Teleostei: Percidae: Etheostoma) with complete subgeneric sampling of the genus Etheostoma
    • Lang NJ, Mayden RL (2007) Systematics of the subgenus Oligocephalus (Teleostei: Percidae: Etheostoma) with complete subgeneric sampling of the genus Etheostoma. Mol Phylogen Evol 43: 605-615.
    • (2007) Mol Phylogen Evol , vol.43 , pp. 605-615
    • Lang, N.J.1    Mayden, R.L.2
  • 25
    • 0030184676 scopus 로고    scopus 로고
    • Interbasin transfer of aquatic biota via anglers bait buckets
    • Ludwig HR, Leitch JA (1996) Interbasin transfer of aquatic biota via anglers bait buckets. Fisheries 21: 14-18.
    • (1996) Fisheries , vol.21 , pp. 14-18
    • Ludwig, H.R.1    Leitch, J.A.2
  • 26
    • 0036943858 scopus 로고    scopus 로고
    • Comparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs
    • Maguire TL, Peakall R, Saenger P (2002) Comparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs. Theor Appl Gen 104: 388-398.
    • (2002) Theor Appl Gen , vol.104 , pp. 388-398
    • Maguire, T.L.1    Peakall, R.2    Saenger, P.3
  • 28
    • 33644871292 scopus 로고    scopus 로고
    • GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research
    • Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
    • (2006) Mol Ecol Notes , vol.6 , pp. 288-295
    • Peakall, R.1    Smouse, P.E.2
  • 29
    • 0031856979 scopus 로고    scopus 로고
    • Identifying populations for conservation on the basis of genetic markers
    • Petit RJ, El Mousadik A, Pons O (1998) Identifying populations for conservation on the basis of genetic markers. Conserv Biol 12: 844-855.
    • (1998) Conserv Biol , vol.12 , pp. 844-855
    • Petit, R.J.1    El Mousadik, A.2    Pons, O.3
  • 30
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotypic data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotypic data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 31
    • 36849080837 scopus 로고    scopus 로고
    • Genepop'007: a complete re-implementation of the Genepop software for Windows and Linux
    • Rousset P (2008) Genepop'007: a complete re-implementation of the Genepop software for Windows and Linux. Mol Ecol Resour 8: 103-106.
    • (2008) Mol Ecol Resour , vol.8 , pp. 103-106
    • Rousset, P.1
  • 32
    • 0029510017 scopus 로고
    • A ground water sapping landscape in the Florida Panhandle
    • Schumm SA, Boyd KF, Wolff CG, Spitz WJ (1995) A ground water sapping landscape in the Florida Panhandle. Geomorphology 12: 281-297.
    • (1995) Geomorphology , vol.12 , pp. 281-297
    • Schumm, S.A.1    Boyd, K.F.2    Wolff, C.G.3    Spitz, W.J.4
  • 33
    • 0032233178 scopus 로고    scopus 로고
    • Phylogenetic relations among percid fishes as inferred from mitochondrial cytochrome b DNA sequence data
    • Song CB, Near TJ, Page LM (1998) Phylogenetic relations among percid fishes as inferred from mitochondrial cytochrome b DNA sequence data. Mol Phylogen Evol 10: 343-353.
    • (1998) Mol Phylogen Evol , vol.10 , pp. 343-353
    • Song, C.B.1    Near, T.J.2    Page, L.M.3
  • 34
    • 38949130719 scopus 로고    scopus 로고
    • Microsatellite DNA primers for the candy darter, Etheostoma osburni and variegate darter, Etheostoma variatum, and cross-species amplification in other darters (Percidae)
    • Switzer JF, Welsh SA, King TL (2008) Microsatellite DNA primers for the candy darter, Etheostoma osburni and variegate darter, Etheostoma variatum, and cross-species amplification in other darters (Percidae). Mol Ecol Resour 8: 335-338.
    • (2008) Mol Ecol Resour , vol.8 , pp. 335-338
    • Switzer, J.F.1    Welsh, S.A.2    King, T.L.3
  • 35
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis
    • Tajima F (1989) Statistical method for testing the neutral mutation hypothesis. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 36
    • 0002747469 scopus 로고
    • Measurement of DNA polymorphism
    • N. Takahata and A. G. Clark (Eds.), Sunderland: Sinauer Associates Inc
    • Tajima F (1993) Measurement of DNA polymorphism. In: Takahata N, Clark AG (eds) Mechanisms of molecular evolution. Sinauer Associates Inc, Sunderland, pp 37-59.
    • (1993) Mechanisms of Molecular Evolution , pp. 37-59
    • Tajima, F.1
  • 37
    • 50249124708 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonucleases mapping and DNA sequence data. III. Cladogram estimation
    • Templeton AR, Crandall KA, Sin CF (1992) A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonucleases mapping and DNA sequence data. III. Cladogram estimation. Genetics 13: 597-601.
    • (1992) Genetics , vol.13 , pp. 597-601
    • Templeton, A.R.1    Crandall, K.A.2    Sin, C.F.3
  • 38
    • 33644850168 scopus 로고    scopus 로고
    • Microsatellite DNA markers for the rainbow darter, Etheostomacaeruleum (Percidae), and their potential utility for other darter species
    • Tonnis BD (2006) Microsatellite DNA markers for the rainbow darter, Etheostomacaeruleum (Percidae), and their potential utility for other darter species. Mol Ecol Notes 6: 230-232.
    • (2006) Mol Ecol Notes , vol.6 , pp. 230-232
    • Tonnis, B.D.1
  • 41
    • 4344606590 scopus 로고    scopus 로고
    • MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data
    • van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.
    • (2004) Mol Ecol Notes , vol.4 , pp. 535-538
    • van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3    Shipley, P.4
  • 42
    • 0026364289 scopus 로고
    • Pacific Salmon, Oncorhynchus spp. and the definition of 'species' under the endangered species act
    • Waples RS (1991) Pacific Salmon, Oncorhynchus spp. and the definition of 'species' under the endangered species act. Mar Fish Rev 53: 11-22.
    • (1991) Mar Fish Rev , vol.53 , pp. 11-22
    • Waples, R.S.1
  • 43
    • 0002643007 scopus 로고
    • Evolutionarily significant units and the conservation of biological diversity under the Endangered Species Act
    • J. L. Nielsen and G. A. Powers (Eds.), Bethesda: American Fisheries Society
    • Waples RS (1995) Evolutionarily significant units and the conservation of biological diversity under the Endangered Species Act. In: Nielsen JL, Powers GA (eds) Evolution and the aquatic ecosystem: defining unique units in population conservation. American Fisheries Society, Bethesda, pp 8-27.
    • (1995) Evolution and the Aquatic Ecosystem: Defining Unique Units in Population Conservation , pp. 8-27
    • Waples, R.S.1
  • 44
    • 33645859299 scopus 로고    scopus 로고
    • What is a population? An empirical evaluation of some genetic methods for identifying the number of gene pools and their degree of connectivity
    • Waples RS, Gaggiotti O (2006) What is a population? An empirical evaluation of some genetic methods for identifying the number of gene pools and their degree of connectivity. Mol Ecol 15: 1419-1439.
    • (2006) Mol Ecol , vol.15 , pp. 1419-1439
    • Waples, R.S.1    Gaggiotti, O.2
  • 45
    • 0017481191 scopus 로고
    • Is the most frequent allele the oldest?
    • Watterson A, Guess HA (1977) Is the most frequent allele the oldest? Theor Popul Biol 11: 141-160.
    • (1977) Theor Popul Biol , vol.11 , pp. 141-160
    • Watterson, A.1    Guess, H.A.2


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