Diverse bacterial groups are associated with corrosive lesions at a Granite Mountain Record Vault (GMRV)

Journal of Applied Microbiology

Volumn 111, Issue 2, 2011, Pages 329-337

  Kan, J ^a,c   Chellamuthu, P ^a   Obraztsova, A ^a   Moore, J E ^b   Nealson, K H ^a  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^b CCS Control Systems Inc ^*  (United States)

^c STROUD WATER RESEARCH CENTER   (United States)

Author keywords

Bacterial community; GMRV; Microbially influenced corrosion; Non SRB

Indexed keywords

ELECTROPHORESIS; GRANITE; MICROWAVE INTEGRATED CIRCUITS; POLYMERASE CHAIN REACTION; REDOX REACTIONS; STEEL CORROSION; SULFUR COMPOUNDS;

ACTINOBACTERIA; ALPHAPROTEOBACTERIUM; BACTERIAL COMMUNITY; CORROSION SITES; FIRMICUTES; GRANITE MOUNTAIN RECORD VAULT; MICROBIALLY-INFLUENCED CORROSIONS; MOLECULAR APPROACH; NON-SULPHATE-REDUCING BACTERIA; SULPHATE REDUCING BACTERIA;

BACTERIA;

STEEL; SULFATE; WATER;

BACTERIUM; CORROSION; ELECTROKINESIS; ELECTRON; LESION; MICROBIAL COMMUNITY; MOLECULAR ANALYSIS; POLYMERASE CHAIN REACTION;

ACTINOBACTERIA; ALPHAPROTEOBACTERIA; ANIMAL EXPERIMENT; ARTICLE; BACTERIUM; BACTERIUM CULTURE; BACTERIUM ISOLATION; BACTEROIDETES; BETAPROTEOBACTERIA; BIOMASS PRODUCTION; CONTROLLED STUDY; DELTAPROTEOBACTERIA; DENATURING GRADIENT GEL ELECTROPHORESIS; ELECTRON; ELECTRON TRANSPORT; ENERGY; FIRMICUTES; GAMMAPROTEOBACTERIA; GRANITE; GRANITE MOUNTAIN RECORD VAULT; MICROBIAL COMMUNITY; MICROBIAL CORROSION; MICROBIAL DIVERSITY; MICROBIALLY INFLUENCED CORROSION; MOLECULAR BIOLOGY; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PARTICLE SIZE; POLYMERASE CHAIN REACTION; PROTEOBACTERIA; ROCK; SULFATE REDUCING BACTERIA; UNINDEXED SEQUENCE; UNITED STATES; WATER SUPPLY;

UNITED STATES; UTAH;

ACTINOBACTERIA; ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); BACTEROIDETES; BETAPROTEOBACTERIA; DELTAPROTEOBACTERIA; FIRMICUTES; GAMMAPROTEOBACTERIA;

EID: 79960565786     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2011.05055.x     Document Type: Article

References (48)

1. Amann, R.J., Stromley, J., Devereux, R., Key, R. and Stahl, D.A. (1992) Molecular and microscopic identification of sulfate-reducing bacteria in multispecies biofilms. Appl Environ Microbiol 58, 614-623.
2. Batista, J.F., Pereira, R.F., Lopes, J.M., Carvalho, M.F., Feio, M.J. and Reis, M.A. (2000) In situ corrosion control in industrial water systems. Biodegradation 11, 441-448.
3. Beech, I.B. and Gaylarde, C.C. (1999) Recent advances in the study of biocorrosion - an overview. Rev Microbiol 30, 177-190.
4. Bermont-Bouis, D., Janvier, M., Grimont, P.A., Dupont, I. and Vallaeys, T. (2007) Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel. J Appl Microbiol 102, 161-168.
5. Bolton, N., Critchley, M., Fabien, R., Cromar, N. and Fallowfield, H. (2010) Microbially influenced corrosion of galvanized steel pipes in aerobic water systems. J Appl Microbiol 109, 239-247.
6. Chen, F., Lu, J.R., Binder, B.J., Liu, Y.C. and Hodson, R.E. (2001) Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBRgold. Appl Environ Microbiol 67, 539-545.
7. Crolet, J.L. and Magot, M. (1995) Observations of Non-SRB Sulfidogenic Bacteria from Oilfield Production Facilities. CORROSION/1995, Paper No. 95188. Houston, TX: NACE International.
8. Dexter, S.C. (2003) Microbiologically influenced corrosion. In Corrosion: Fundamentals, Testing and Protection ed. Cramer, S.D. and Covino, B.S. Jr pp. 1-400. Metals Park, OH: ASM Internatioinal.
9. Fleming, H.C. (1996) Economical and technical overview. In Microbially Influenced Corrosion of Materials ed. Heitz, E., Fleming, H.C. and Sand, W. pp. 6-14. New York: Springer-Verlag.
10. Giovannoni, S.J., Britschgi, T.B., Moyer, C.L. and Field, K.G. (1990) Genetic diversity in Sargasso Sea bacterioplankton. Nature 345, 60-63.
11. Gorby, Y.A., Yanina, S., McLean, J.S., Rosso, K.M., Moyles, D., Dohnalkova, A., Beveridge, T.J., Chang, I.S. et al. (2006) Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other organisms. Proc Natl Acad Sci USA 103, 11358-11363.
12. Hamilton, W.A. (1985) Sulphate-reducing bacteria and anaerobic corrosion. Annu Rev Microbiol 39, 195-217.
13. Hamilton, W.A. (2003) Microbially influenced corrosion as a model system for the study of metal microbe interactions: a unifying electron transfer hypothesis. Biofouling 19, 65-76.
14. Horn, J., Carrrillo, C. and Dias, V. (2003) Comparison of the Microbial Community Composition at Yucca Mountain and Laboratory Test Nuclear Repository Environments. CORROSION/2003, Paper No. 03556. Houston, TX: NACE International.
15. Jan-Roblero, J., Romero, J.M., Amaya, M. and Le Borgne, S. (2004) Phylogenetic characterization of a corrosive consortium isolated from a sour gas pipeline. Appl Microbiol Biotechnol 64, 862-867.
16. Jukes, T.H. and Cantor, C.R. (1969) Evolution of protein molecules. In Mammalian Protein Metabolism ed. Munro, H.N. pp. 21-132. New York: Academic Press.
17. Kan, J., Wang, K. and Chen, F. (2006) Temporal variation and detection limit of an estuarine bacterioplankton community analyzed by denaturing gradient gel electrophoresis (DGGE). Aquat Microb Ecol 42, 7-18.
18. Lane, D.J. (1991) 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics ed. Stackebrandt, E. and Goodfellow, M. pp. 115-175. New York: John Wiley & Sons.
19. LeChevallier, M.W., Cawthon, C.D. and Lee, R.G. (1988) Factors promoting survival of bacteria in chlorinated water supplies. Appl Environ Microbiol 54, 649-654.
20. Lee, W., Lewandowski, Z., Nielsen, P.H. and Hamilton, W.A. (1995) Role of sulfate-reducing bacteria in corrosion of mild steel: a review. Biofouling 8, 165-194.
21. Little, B.J. and Lee, J.S. (2007) Microbiologically Influenced Corrosion. Hoboken, NJ: Wiley Interscience.
22. Lopez, M.A., Serna, F.J.Z., Jan-Roblero, J., Romero, J.M. and Hernandez-Rodriguez, C. (2006) Phylogenetic analysis of a biofilm bacterial population in a water pipeline in the Gulf of Mexico. FEMS Microbiol Ecol 58, 145-154.
23. Magot, M., Ravot, G., Campaignolle, X., Ollivier, B., Patel, B.K., Fardeau, M.L., Thomas, P., Crolet, J.L. et al. (1997) Dethiosulfovibrio peptidovorans gen. nov., sp. nov., a new anaerobic, slightly halophilic, thiosulfate-reducing bacterium from corroding offshore oil wells. Int J Syst Bacteriol 47, 818-824.
24. Marsili, E., Baron, D.B., Shikhare, I.D., Coursolle, D., Gralnick, J.A. and Bond, D.R. (2008) Shewanella secretes flavins that mediate extracellular electron transfer. Proc Natl Acad Sci USA 105, 3968-3973.
25. Muyzer, G., de Waal, E.C. and Uitterlinden, A.G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59, 695-700.
26. Myers, C.R. and Myers, J.M. (1997) Outer membrane cytochromes of Shewanella putrefaciens MR-1: spectral analysis, and purification of the 83-kDa c-type cytochrome. Biochim Biophys Acta 1326, 307-318.
27. Myers, C. and Nealson, K.H. (1988) Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptor. Science 240, 1319-1321.
28. Nealson, K.H. (2006) The Manganese-Oxidizing Bacteria. In The Prokaryotes Volume 5: Proteobacteria: Alpha and Beta Subclasses ed. Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K.-H. and Stackebrandt, E. pp. 222-231. New York: Springer.
29. Nealson, K.H. and Popa, R. (2005) Metabolic diversity in the microbial world: relevance to exobiology. In SGM Symposium, Micro-organisms and Earth Systems - Advances in Geomicrobiology ed. Gadd, G.M., Semple, K.T. and Lappin-Scott, H.M. pp. 1151-1171. Oxford: Cambridge University Press.
30. Neria-Gonzalez, I., Wang, E.T., Ramirez, F., Romero, J.M. and Hernandez-Rodriguez, C. (2006) Characterization of bacterial community associated to biofilms of corroded oil pipelines from the southeast of Mexico. Anaerobe 12, 122-133.
31. Obuekwe, C.O., Westlake, D.W.S., Plambeck, J.A. and Cook, F.D. (1981) Corrosion of mild steel in cultures of ferric iron reducing bacterium isolated from crude oil. I. Polarization characteristics. Corrosion 37, 461-467.
32. Okabe, S., Odagiri, M., Ito, T. and Satoh, H. (2007) Succession of sulfur-oxidizing bacteria in the microbial community on corroding concrete in sewer systems. Appl Environ Microbiol 73, 971-980.
33. Page, S. and Gaylarde, C.C. (1990) Biocide activity against Legionella and Pseudomonas. Int Biodeterior Bull 26, 139-148.
34. Pavissich, J.P., Vargas, I.T., Gonzalez, B., Pasten, P.A. and Pizarro, G.E. (2010) Culture dependent and independent analyses of bacterial communities involved in copper plumbing corrosion. J Appl Microbiol 109, 771-782.
35. Pfennig, N., Widdel, F. and Truper, H.G. (1981) The dissimulatory sulfate-reducing bacteria. In The Prokaryotes: A Handbook on Habitats ed. Starr, M.P., Stolp, M., Truper, H.G., Balows, A. and Schlegel, H.G. pp. 926-940. New York: Springer-Verlag.
36. Postgate, J.R. (1979) The Sulphate-Reducing Bacteria. Cambridge: Cambridge University Press.
37. Rajasekar, A., Babu, T.G., Pandian, S.K., Maruthamuthu, S., Palaniswamy, N. and Rajendran, A. (2007) Biodegradation and corrosion behavior of manganese oxidizer Bacillus cereus ACE4 in diesel transporting pipeline. Corros Sci 49, 2694-2710.
38. Reguera, G., McCarthy, K.D., Mehta, T., Nicoll, J.S., Tuominen, M.T. and Lovley, D.R. (2005) Extracellular electron transfer via microbial nanowires. Nature 435, 1098-1101.
39. Saitou, N. and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
40. Satoh, H., Odagiri, M., Ito, T. and Okabe, S. (2009) Microbial community structures and in situ sulfate-reducing and sulfur-oxidizing activities in biofilms developed on mortor specimens in a corroded sewer system. Water Res 43, 4729-4739.
41. Scäfer, H. and Muyzer, G. (2001) Denaturing gradient gel electrophoresis in marine microbial ecology. In Methods in Microbiology ed. Paul, J. pp. 425-468. London: Academic Press.
42. Stahl, D.A., Lane, D.I., Olsen, G.L. and Pace, N.R. (1984) Analysis of hydrothermal vent-associated symbionts by ribosomal RNA sequences. Science 224, 409-411.
43. Valencia-Cantero, E. and Pena-Cabriales, J.J. (2003) The corrosion effects of sulfate- and ferric-reducing bacterial consortia on steel. Geomicrobiol J 20, 157-169.
44. Videla, H.A. (1996) Manual of Biocorrosion. Boca Raton, FL: Lewis Publishers.
45. Vincke, E., Boon, N. and Verstraete, W. (2001) Analysis of the microbial communities on corroded concrete sewer pipes - a case study. Appl Microbiol Biotechnol 57, 776-785.
46. Von Wolzogen Kuhr, C.A.H. and van der Vlugt, L.S. (1934) The graphitization of cast iron as an electrochemical process in anaerobics soils. Water (The Hague) 18, 147-165.
47. Webster, B.J., Wells, D.B. and Bremer, P.J. (1996) The Influence of Potable Water Biofilms on Copper Corrosion. Proc. NACE Corrosion'96. Houston, TX: NACE.
48. Zhu, X., Lubeck, J. and Kilbane, J.J. II (2003) Characterization of microbial communities in gas industry pipelines. Appl Environ Microbiol 69, 5354-5363.