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Volumn 100, Issue 11, 2011, Pages 2557-2565

Robust entrainment of circadian oscillators requires specific phase response curves

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EID: 79960292144     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2011.04.043     Document Type: Article
Times cited : (42)

References (55)
  • 1
    • 4344699146 scopus 로고    scopus 로고
    • The adaptive value of circadian clocks: An experimental assessment in cyanobacteria
    • DOI 10.1016/j.cub.2004.08.023, PII S0960982204006062
    • Woelfle, M. A., Y. Ouyang, ..., C. H. Johnson. 2004. The adaptive value of circadian clocks: an experimental assessment in cyanobacteria. Curr. Biol. 14:1481-1486. (Pubitemid 39123746)
    • (2004) Current Biology , vol.14 , Issue.16 , pp. 1481-1486
    • Woelfle, M.A.1    Ouyang, Y.2    Phanvijhitsiri, K.3    Johnson, C.H.4
  • 3
    • 77952704133 scopus 로고    scopus 로고
    • Circadian control of carbohydrate availability for growth in Arabidopsis plants at night
    • Graf, A., A. Schlereth, ..., A. M. Smith. 2010. Circadian control of carbohydrate availability for growth in Arabidopsis plants at night. Proc. Natl. Acad. Sci. USA. 107:9458-9463.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 9458-9463
    • Graf, A.1    Schlereth, A.2    Smith, A.M.3
  • 5
    • 0034688220 scopus 로고    scopus 로고
    • Circadian clocks limited by noise
    • Barkai, N., and S. Leibler. 2000. Circadian clocks limited by noise. Nature. 403:267-268. (Pubitemid 30062374)
    • (2000) Nature , vol.403 , Issue.6767 , pp. 267-268
    • Barkai, N.1    Leibler, S.2
  • 7
    • 3042810019 scopus 로고    scopus 로고
    • Resilient circadian oscillator revealed in individual cyanobacteria
    • DOI 10.1038/nature02533
    • Mihalcescu, I., W. Hsing, and S. Leibler. 2004. Resilient circadian oscillator revealed in individual cyanobacteria. Nature. 430:81-85. (Pubitemid 38915228)
    • (2004) Nature , vol.430 , Issue.6995 , pp. 81-85
    • Mihalcescu, I.1    Hsing, W.2    Leibler, S.3
  • 8
    • 77950794014 scopus 로고    scopus 로고
    • Robustness, dissipations and coherence of the oscillation of circadian clock: Potential landscape and flux perspectives
    • Wang, J., L. Xu, and E. Wang. 2008. Robustness, dissipations and coherence of the oscillation of circadian clock: potential landscape and flux perspectives. PMC Biophys. 1:7.
    • (2008) PMC Biophys , vol.1 , pp. 7
    • Wang, J.1    Xu, L.2    Wang, E.3
  • 9
    • 58749109143 scopus 로고    scopus 로고
    • Circadian gene expression is resilient to large fluctuations in overall transcription rates
    • Dibner, C., D. Sage, ..., U. Schibler. 2009. Circadian gene expression is resilient to large fluctuations in overall transcription rates. EMBO J. 28:123-134.
    • (2009) EMBO J. , vol.28 , pp. 123-134
    • Dibner, C.1    Sage, D.2    Schibler, U.3
  • 10
  • 13
    • 0027068841 scopus 로고
    • Variability of bio-optical properties of the upper ocean associated with diel cycles in phytoplankton population
    • Stramska, M., and T. D. Dicky. 1992. Variability of bio-optical properties of the upper ocean associated with diel cycles in phytoplankton population. J. Geophys. Res. 97:17873-17887.
    • (1992) J. Geophys. Res. , vol.97 , pp. 17873-17887
    • Stramska, M.1    Dicky, T.D.2
  • 15
    • 0033181166 scopus 로고    scopus 로고
    • Accuracy of circadian entrainment under fluctuating light conditions: Contributions of phase and period responses
    • Beersma, D. G. M., S. Daan, and R. A. Hut. 1999. Accuracy of circadian entrainment under fluctuating light conditions: contributions of phase and period responses. J. Biol. Rhythms. 14:320-329. (Pubitemid 30157092)
    • (1999) Journal of Biological Rhythms , vol.14 , Issue.4 , pp. 320-329
    • Beersma, D.G.M.1    Daan, S.2    Hut, R.A.3
  • 16
    • 70450173299 scopus 로고    scopus 로고
    • Weather and seasons together demand complex biological clocks
    • Troein, C., J. C. W. Locke, ..., A. J. Millar. 2009. Weather and seasons together demand complex biological clocks. Curr. Biol. 19:1961-1964.
    • (2009) Curr. Biol. , vol.19 , pp. 1961-1964
    • Troein, C.1    Locke, J.C.W.2    Millar, A.J.3
  • 17
    • 78649638983 scopus 로고    scopus 로고
    • Robustness of circadian clocks to daylight fluctuations: Hints from the picoeucaryote Ostreococcus tauri
    • Thommen, Q., B. Pfeuty, ..., M. Lefranc. 2010. Robustness of circadian clocks to daylight fluctuations: hints from the picoeucaryote Ostreococcus tauri. PLOS Comput. Biol. 6:e1000990.
    • (2010) PLOS Comput. Biol. , vol.6
    • Thommen, Q.1    Pfeuty, B.2    Lefranc, M.3
  • 18
    • 78650712177 scopus 로고    scopus 로고
    • A robust two-gene oscillator at the core of Ostreococcus tauri circadian clock
    • Morant, P.-E., Q. Thommen, ..., M. Lefranc. 2010. A robust two-gene oscillator at the core of Ostreococcus tauri circadian clock. Chaos. 20:045108.
    • (2010) Chaos , vol.20 , pp. 045108
    • Morant, P.-E.1    Thommen, Q.2    Lefranc, M.3
  • 19
    • 0003055918 scopus 로고
    • Chemical oscillations
    • Springer, New York
    • Kuramoto, Y. 1984. Chemical Oscillations. Waves and Turbulence, Springer, New York.
    • (1984) Waves and Turbulence
    • Kuramoto, Y.1
  • 22
    • 0029258143 scopus 로고
    • Synchronization in excitatory neural networks
    • Hansel, D., G. Mato, and C. Meunier. 1995. Synchronization in excitatory neural networks. Phys. Rev. E. 7:307.
    • (1995) Phys. Rev. E , vol.7 , pp. 307
    • Hansel, D.1    Mato, G.2    Meunier, C.3
  • 23
    • 0030195232 scopus 로고    scopus 로고
    • Type I Membranes, Phase Resetting Curves, and Synchrony
    • Ermentrout, B. 1996. Type I membranes, phase resetting curves, and synchrony. Neural Comput. 8:979-1001. (Pubitemid 126449954)
    • (1996) Neural Computation , vol.8 , Issue.5 , pp. 979-1001
    • Ermentrout, B.1
  • 24
    • 0037706084 scopus 로고    scopus 로고
    • Electrical synapses and synchrony: The role of intrinsic currents
    • Pfeuty, B., G. Mato, ..., D. Hansel. 2003. Electrical synapses and synchrony: the role of intrinsic currents. J. Neurosci. 23:6280-6294. (Pubitemid 36875630)
    • (2003) Journal of Neuroscience , vol.23 , Issue.15 , pp. 6280-6294
    • Pfeuty, B.1    Mato, G.2    Golomb, D.3    Hansel, D.4
  • 25
    • 0043064237 scopus 로고    scopus 로고
    • Synchronization of strongly coupled excitatory neurons: Relating network behavior to biophysics
    • DOI 10.1023/A:1024474819512
    • Acker, C. D., N. Kopell, and J. A. White. 2003. Synchronization of strongly coupled excitatory neurons: relating network behavior to biophysics. J. Comput. Neurosci. 15:71-90. (Pubitemid 36992478)
    • (2003) Journal of Computational Neuroscience , vol.15 , Issue.1 , pp. 71-90
    • Acker, C.D.1    Kopell, N.2    White, J.A.3
  • 26
    • 43049096471 scopus 로고    scopus 로고
    • Class-II neurons display a higher degree of stochastic synchronization than class-I neurons
    • Marella, S., and G. B. Ermentrout. 2008. Class-II neurons display a higher degree of stochastic synchronization than class-I neurons. Phys. Rev. E. 77:041918.
    • (2008) Phys. Rev. E , vol.77 , pp. 041918
    • Marella, S.1    Ermentrout, G.B.2
  • 27
    • 68949147887 scopus 로고    scopus 로고
    • Type-II phase resetting curve is optimal for stochastic synchrony
    • Abouzeid, A., and B. Ermentrout. 2009. Type-II phase resetting curve is optimal for stochastic synchrony. Phys. Rev. E. 80:011911.
    • (2009) Phys. Rev. E , vol.80 , pp. 011911
    • Abouzeid, A.1    Ermentrout, B.2
  • 28
    • 39849102205 scopus 로고    scopus 로고
    • Sensitivity measures for oscillating systems: Application to mammalian circadian gene network
    • DOI 10.1109/TAC.2007.911364
    • Taylor, S. R., R. Gunawan, ..., F. J. Doyle. 2008. Sensitivity measures for oscillating systems: application to mammalian circadian gene network. IEEE Trans. Automat. Contr. 53:177-188. (Pubitemid 351314548)
    • (2008) IEEE Transactions on Automatic Control , vol.53 , Issue.1 , pp. 177-188
    • Taylor, S.R.1    Gunawan, R.2    Petzold, L.R.3    Doyle III, F.J.4
  • 29
    • 0035458732 scopus 로고    scopus 로고
    • Time zones: A comparative genetics of circadian clocks
    • DOI 10.1038/35088576
    • Young, M. W., and S. A. Kay. 2001. Time zones: a comparative genetics of circadian clocks. Nat. Rev. Genet. 2:702-715. (Pubitemid 33674792)
    • (2001) Nature Reviews Genetics , vol.2 , Issue.9 , pp. 702-715
    • Young, M.W.1    Kay, S.A.2
  • 30
    • 56749160113 scopus 로고    scopus 로고
    • Design principles of biochemical oscillators
    • Novák, B., and J. J. Tyson. 2008. Design principles of biochemical oscillators. Nat. Rev. Mol. Cell Biol. 9:981-991.
    • (2008) Nat. Rev. Mol. Cell Biol. , vol.9 , pp. 981-991
    • Novák, B.1    Tyson, J.J.2
  • 31
    • 61349148719 scopus 로고    scopus 로고
    • Oscillations in the expression of a self-repressed gene induced by a slow transcriptional dynamics
    • Morant, P. E., Q. Thommen, ..., M. Lefranc. 2009. Oscillations in the expression of a self-repressed gene induced by a slow transcriptional dynamics. Phys. Rev. Lett. 102:068104.
    • (2009) Phys. Rev. Lett. , vol.102 , pp. 068104
    • Morant, P.E.1    Thommen, Q.2    Lefranc, M.3
  • 32
    • 0033375755 scopus 로고    scopus 로고
    • Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora
    • Leloup, J. C., D. Gonze, and A. Goldbeter. 1999. Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora. J. Biol. Rhythms. 14:433-448. (Pubitemid 30086851)
    • (1999) Journal of Biological Rhythms , vol.14 , Issue.6 , pp. 433-448
    • Leloup, J.-C.1    Gonze, D.2    Goldbeter, A.3
  • 34
    • 0018547853 scopus 로고
    • Genetic dissection of the Drosophila circadian system
    • Konopka, R. J. 1979. Genetic dissection of the Drosophila circadian system. Fed. Proc. 38:2602-2605.
    • (1979) Fed. Proc. , vol.38 , pp. 2602-2605
    • Konopka, R.J.1
  • 35
    • 0022178519 scopus 로고
    • Response curve, free-running period, and activity time in circadian locomotor rhythm of rats
    • Honma, K., S. Honma, and T. Hiroshige. 1985. Response curve, freerunning period, and activity time in circadian locomotor rhythm of rats. Jpn. J. Physiol. 35:643-658. (Pubitemid 16250123)
    • (1985) Japanese Journal of Physiology , vol.35 , Issue.4 , pp. 643-658
    • Honma, K.-I.1    Honma, S.2    Hiroshige, T.3
  • 36
    • 34250388337 scopus 로고
    • A functional analysis of circadian pacemakers in nocturnal rodents. II. The variability of phase response curves
    • Daan, S., and C. Pittendrigh. 1976. A functional analysis of circadian pacemakers in nocturnal rodents. II. The variability of phase response curves. J. Comp. Physiol. 106:253-266.
    • (1976) J. Comp. Physiol. , vol.106 , pp. 253-266
    • Daan, S.1    Pittendrigh, C.2
  • 37
    • 0001042245 scopus 로고
    • Assay and characteristics of circadian rhythmicity in liquid cultures of Neurospora crassa
    • Perlman, J., H. Nakashima, and J. F. Feldman. 1981. Assay and characteristics of circadian rhythmicity in liquid cultures of Neurospora crassa. Plant Physiol. 67:404-407.
    • (1981) Plant Physiol. , vol.67 , pp. 404-407
    • Perlman, J.1    Nakashima, H.2    Feldman, J.F.3
  • 39
    • 0041293182 scopus 로고
    • The phase response curve of electroretinographic circadian rhythm of crayfish
    • Fuentes-Pardo, B., and J. Ramos-Carvajal. 1983. The phase response curve of electroretinographic circadian rhythm of crayfish. Comp. Biochem. Physiol. 74:711-714.
    • (1983) Comp. Biochem. Physiol. , vol.74 , pp. 711-714
    • Fuentes-Pardo, B.1    Ramos-Carvajal, J.2
  • 40
    • 0003206774 scopus 로고
    • Some properties of the system controlling the circadian activity rhythm of sparrows. In Biochronometry
    • M. Menaker, editor, Washington
    • Eskin, A. 1971. Some properties of the system controlling the circadian activity rhythm of sparrows. In Biochronometry. M. Menaker, editor. National Academy of Sciences, Washington. 55-80.
    • (1971) National Academy of Sciences , pp. 55-80
    • Eskin, A.1
  • 41
    • 0015889150 scopus 로고
    • The dependence of the phase response curve for the luminescence rhythm in gonyaulax on the irradiance in constant conditions
    • Christianson, R., and B. M. Sweeney. 1973. The dependence of the phase response curve for the luminescence rhythm in gonyaulax on the irradiance in constant conditions. Int. J. Chronobiol. 1:95-100.
    • (1973) Int. J. Chronobiol. , vol.1 , pp. 95-100
    • Christianson, R.1    Sweeney, B.M.2
  • 42
    • 0024772986 scopus 로고
    • Circadian rhythm of photoaccumulation in Paramecium bursaria
    • Johnson, C. H., I. Miwa, ..., J. W. Hastings. 1989. Circadian rhythm of photoaccumulation in Paramecium bursaria. J. Biol. Rhythms. 4:405-415.
    • (1989) J. Biol. Rhythms. , vol.4 , pp. 405-415
    • Johnson, C.H.1    Miwa, I.2    Hastings, J.W.3
  • 43
    • 0017692836 scopus 로고
    • Strong' phase response curve for the circadian rhythm of locomotor activity in a cockroach (Nauphoeta cinerea)
    • Saunders, D. S., and E. Thomson. 1977. 'Strong' phase response curve for the circadian rhythm of locomotor activity in a cockroach (Nauphoeta cinerea). Nature. 170:241-243. (Pubitemid 8212177)
    • (1977) Nature , vol.270 , Issue.5634 , pp. 241-243
    • Saunders, D.S.1    Thomson, E.J.2
  • 44
    • 0010237264 scopus 로고
    • An experimental and theoretical analysis of photoperiod induction in the flesh fly and Sarcophaga argyrostoma
    • Saunders, D. S. 1978. An experimental and theoretical analysis of photoperiod induction in the flesh fly and Sarcophaga argyrostoma. J. Comp. Physiol. 124:75-95.
    • (1978) J. Comp. Physiol. , vol.124 , pp. 75-95
    • Saunders, D.S.1
  • 45
    • 12244297781 scopus 로고    scopus 로고
    • Entrainment in a model of the mammalian circadian oscillator
    • DOI 10.1177/0748730404269309
    • Geier, F., S. Becker-Weimann, ..., H. Herzel. 2005. Entrainment in a model of the mammalian circadian oscillator. J. Biol. Rhythms. 20:83-93. (Pubitemid 40116622)
    • (2005) Journal of Biological Rhythms , vol.20 , Issue.1 , pp. 83-93
    • Geier, F.1    Becker-Weimann, S.2    Kramer, A.3    Herzel, H.4
  • 46
    • 29544448913 scopus 로고    scopus 로고
    • Extension of a genetic network model by iterative experimentation and mathematical analysis
    • 2005.0013
    • Locke, J. C. W., M. M. Southern, ..., A. J. Millar. 2005. Extension of a genetic network model by iterative experimentation and mathematical analysis. Mol. Syst. Biol. 1:2005.0013.
    • (2005) Mol. Syst. Biol. , vol.1
    • Locke, J.C.W.1    Southern, M.M.2    Millar, A.J.3
  • 47
    • 70349628447 scopus 로고    scopus 로고
    • How to achieve fast entrainment? The timescale to synchronization
    • Granada, A. E., and H. Herzel. 2009. How to achieve fast entrainment? The timescale to synchronization. PLoS ONE. 4:e7057.
    • (2009) PLoS ONE , vol.4
    • Granada, A.E.1    Herzel, H.2
  • 48
    • 33747440791 scopus 로고    scopus 로고
    • Amplitude of circadian oscillations entrained by 24-h light-dark cycles
    • DOI 10.1016/j.jtbi.2006.03.016, PII S0022519306001214
    • Kurosawa, G., and A. Goldbeter. 2006. Amplitude of circadian oscillations entrained by 24-h light-dark cycles. J. Theor. Biol. 242:478-488. (Pubitemid 44251120)
    • (2006) Journal of Theoretical Biology , vol.242 , Issue.2 , pp. 478-488
    • Kurosawa, G.1    Goldbeter, A.2
  • 49
    • 34147139858 scopus 로고    scopus 로고
    • Phase sensitivity analysis of circadian rhythm entrainment
    • DOI 10.1177/0748730407299194
    • Gunawan, R., and F. J. Doyle, 3rd. 2007. Phase sensitivity analysis of circadian rhythm entrainment. J. Biol. Rhythms. 22:180-194. (Pubitemid 46568653)
    • (2007) Journal of Biological Rhythms , vol.22 , Issue.2 , pp. 180-194
    • Gunawan, R.1    Doyle III, F.J.2
  • 50
    • 59649092354 scopus 로고    scopus 로고
    • Phase response curves elucidating the dynamics of coupled oscillators
    • Granada, A., R. M. Hennig, ..., H. Herzel. 2009. Phase response curves elucidating the dynamics of coupled oscillators. Methods Enzymol. 454:1-27.
    • (2009) Methods Enzymol. , vol.454 , pp. 1-27
    • Granada, A.1    Hennig, R.M.2    Herzel, H.3
  • 53
    • 46849090495 scopus 로고    scopus 로고
    • Robust, tunable biological oscillations from interlinked positive and negative feedback loops
    • Tsai, T. Y., Y. S. Choi, ..., J. E. Ferrell, Jr. 2008. Robust, tunable biological oscillations from interlinked positive and negative feedback loops. Science. 321:126-129.
    • (2008) Science , vol.321 , pp. 126-129
    • Tsai, T.Y.1    Choi, Y.S.2    Ferrell Jr., J.E.3
  • 54
    • 70450228872 scopus 로고    scopus 로고
    • The combination of positive and negative feedback loops confers exquisite flexibility to biochemical switches
    • Pfeuty, B., and K. Kaneko. 2009. The combination of positive and negative feedback loops confers exquisite flexibility to biochemical switches. Phys. Biol. 6:046013.
    • (2009) Phys. Biol. , vol.6 , pp. 046013
    • Pfeuty, B.1    Kaneko, K.2
  • 55
    • 77956168212 scopus 로고    scopus 로고
    • Photoadaptation in Neurospora by competitive interaction of activating and inhibitory LOV domains
    • Malzahn, E., S. Ciprianidis, ..., M. Brunner. 2010. Photoadaptation in Neurospora by competitive interaction of activating and inhibitory LOV domains. Cell. 142:762-772.
    • (2010) Cell , vol.142 , pp. 762-772
    • Malzahn, E.1    Ciprianidis, S.2    Brunner, M.3


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